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The map label for this gene is ygcU [H]

Identifier: 158317349

GI number: 158317349

Start: 6790709

End: 6792427

Strand: Reverse

Name: ygcU [H]

Synonym: Franean1_5599

Alternate gene names: 158317349

Gene position: 6792427-6790709 (Counterclockwise)

Preceding gene: 158317352

Following gene: 158317348

Centisome position: 75.62

GC content: 77.14

Gene sequence:

>1719_bases
ATGACCACCGAGGCGACGACCGCGCCCGCCGATCCGGTCTGGTGGGGGTGGGGCGCCGCGGCCGCGCACCACCCGCTGCC
GGGCGCCGTCCGCGACCTGCTCGACCAGCTGGGCATTCCGTCCCGCCCCAGCGCGCCGGTCGTGCTCGCCGACATCACGC
TCCCGCCGGTCCGCCTGCCGGGCGAGGTGCTGGACGAGCTGCGGGCCGTGGTCGGCGCCGGCCATGTCCGGGATGACCGC
GAGGCGCGGGTCCGCCACTGCCGGGGTCGCTCCACCGTCGACCTGCTGCGGCTGCGGTCCGGGGACGCCTCCGACGCGCC
CGACGCCGTCGTCGCGCCGCTCGATCACGAGCAGGTCCTCGCGGTGCTGCGGATCTGTTCCCGCCACCGCGTGATCGTCG
TCCCGTTCGGCGGCGGCACCTCGGTCGTCGGCGGCCTCACCCCCCGGCTCCCGCCGGGTCAGGCGCCCGACGGCGCACCC
CGGTGGCACGGCGCCGTCGCGCTCGACCTGCACCGGCTCGACGGCCTCCTGCGCGTCGACCAGCTCTCCGGGACGGCGGT
GCTGGGCGCCGGCCTGCGCGGGCCCGCCGCGGAGGCGCTGCTCGCCGAGCACGGCCTGACCCTCGGGCACGTCCCGCAGT
CGTGGGAGTACGCCACGATCGGCGGGTTCGCGGCGACCCGGTCGAGCGGCCAGGCATCGGCCGGCTACGGGCGGTTCGAC
CAGCTCGTCACCGGGCTGCGGCTGGCGACCCCGGTGGGGACGTGGCAGCCGGGGCGGGGGCCGGCGTCGGCGGCCGGTCC
CGACCTGCGCCAGCTCGCGCTGGGCTCCGAGGGCGCGTTCGGGGTGATCACTGAGGTCACCGTGCGGGTGCGCCCGGCCC
CGGCGCGGCGGCGGTACGAGGGCTGGCGGGTCGCGGACCTGGCCACCGGCCTGGACCTGCTGCGCGAGCTGGCCCAGCGG
GACCTGCTGCCCACCGTCCTGCGCCTCTCCGACGAACTGGAGACGGCCGCCGGCCTGGCCAACGCCGTCAGCGCGGGCAC
CGATGTCTCCGCCGGTGCCGATGCGGCCAACGCAGCCGATGGCCCCGCGGGCGCCGATGCCGCCGCCGATGTCACCGCCT
CGGGCGGGTGCTACCTGGTCACCGGGTACGAGGGGAGCGAGGACGAGGTGACCGGACGCGCCGCGGAGGTCCGCGCGGTC
CTGAGGGACGCCGGCGCCCGCCCGCTCGGCGAGGACGTGGGACGGGACTGGGCCGCCGGCCGCTTCCACGCCCCATACCT
GCGCGACGCGCTCCTCGACGAGGGCATCTTCGCCGAGACCCTGGAGACGGCCGGGTACTGGTCGGCGATCCCGACGCTGT
ACGCGGCGGTCCGCGCGGCGGTGACCGGCGCGATCGAGTCCGACGGGTCGCCGGCCGTCGTTCTCTGCCACGTCTCGCAC
GTCTACCCGGCGGGGGCGTCGCTCTACTTCACGGTCGTCTGCGCCGAGGGCCCGGACCCGATCTCCCGCTGGGACCGGGC
GAAGCGCGCCGCCGGAGACGCGATCATGGCGAACGGTGGCACGATCACCCACCACCACGCGGTCGGCACGGACCACCGTC
CCTGGATGCCCGCGGAGGTCGGCGAGGTGGGCGTCGCCGTCCTGCGCGCGGTGAAGGCCGTGCTGGACCCGGCGGGCATC
CTCAACCCGGGTGTCCTCGTGCCGCCGCCGTCCGAGTAG

Upstream 100 bases:

>100_bases
GGGCCGGGATCGTGTGACACTGTTACTCGAGTTGTCACAGCGTATCGACGATACCGCCTCGACCCCGGCGGAACGGATGC
GAACTGATGAGGTGACGGCG

Downstream 100 bases:

>100_bases
CGCCGCCGTCCGGATACCGCGCACGGCCCACCGGGGTCGTCGGTACCGGATCTCGCCGGGTAACGGGGCCCTGTGTGACG
TCACGGACACATTGGGTATC

Product: FAD linked oxidase domain-containing protein

Products: alkyl-glycerone 3-phosphate; long-chain acid anion

Alternate protein names: NA

Number of amino acids: Translated: 572; Mature: 571

Protein sequence:

>572_residues
MTTEATTAPADPVWWGWGAAAAHHPLPGAVRDLLDQLGIPSRPSAPVVLADITLPPVRLPGEVLDELRAVVGAGHVRDDR
EARVRHCRGRSTVDLLRLRSGDASDAPDAVVAPLDHEQVLAVLRICSRHRVIVVPFGGGTSVVGGLTPRLPPGQAPDGAP
RWHGAVALDLHRLDGLLRVDQLSGTAVLGAGLRGPAAEALLAEHGLTLGHVPQSWEYATIGGFAATRSSGQASAGYGRFD
QLVTGLRLATPVGTWQPGRGPASAAGPDLRQLALGSEGAFGVITEVTVRVRPAPARRRYEGWRVADLATGLDLLRELAQR
DLLPTVLRLSDELETAAGLANAVSAGTDVSAGADAANAADGPAGADAAADVTASGGCYLVTGYEGSEDEVTGRAAEVRAV
LRDAGARPLGEDVGRDWAAGRFHAPYLRDALLDEGIFAETLETAGYWSAIPTLYAAVRAAVTGAIESDGSPAVVLCHVSH
VYPAGASLYFTVVCAEGPDPISRWDRAKRAAGDAIMANGGTITHHHAVGTDHRPWMPAEVGEVGVAVLRAVKAVLDPAGI
LNPGVLVPPPSE

Sequences:

>Translated_572_residues
MTTEATTAPADPVWWGWGAAAAHHPLPGAVRDLLDQLGIPSRPSAPVVLADITLPPVRLPGEVLDELRAVVGAGHVRDDR
EARVRHCRGRSTVDLLRLRSGDASDAPDAVVAPLDHEQVLAVLRICSRHRVIVVPFGGGTSVVGGLTPRLPPGQAPDGAP
RWHGAVALDLHRLDGLLRVDQLSGTAVLGAGLRGPAAEALLAEHGLTLGHVPQSWEYATIGGFAATRSSGQASAGYGRFD
QLVTGLRLATPVGTWQPGRGPASAAGPDLRQLALGSEGAFGVITEVTVRVRPAPARRRYEGWRVADLATGLDLLRELAQR
DLLPTVLRLSDELETAAGLANAVSAGTDVSAGADAANAADGPAGADAAADVTASGGCYLVTGYEGSEDEVTGRAAEVRAV
LRDAGARPLGEDVGRDWAAGRFHAPYLRDALLDEGIFAETLETAGYWSAIPTLYAAVRAAVTGAIESDGSPAVVLCHVSH
VYPAGASLYFTVVCAEGPDPISRWDRAKRAAGDAIMANGGTITHHHAVGTDHRPWMPAEVGEVGVAVLRAVKAVLDPAGI
LNPGVLVPPPSE
>Mature_571_residues
TTEATTAPADPVWWGWGAAAAHHPLPGAVRDLLDQLGIPSRPSAPVVLADITLPPVRLPGEVLDELRAVVGAGHVRDDRE
ARVRHCRGRSTVDLLRLRSGDASDAPDAVVAPLDHEQVLAVLRICSRHRVIVVPFGGGTSVVGGLTPRLPPGQAPDGAPR
WHGAVALDLHRLDGLLRVDQLSGTAVLGAGLRGPAAEALLAEHGLTLGHVPQSWEYATIGGFAATRSSGQASAGYGRFDQ
LVTGLRLATPVGTWQPGRGPASAAGPDLRQLALGSEGAFGVITEVTVRVRPAPARRRYEGWRVADLATGLDLLRELAQRD
LLPTVLRLSDELETAAGLANAVSAGTDVSAGADAANAADGPAGADAAADVTASGGCYLVTGYEGSEDEVTGRAAEVRAVL
RDAGARPLGEDVGRDWAAGRFHAPYLRDALLDEGIFAETLETAGYWSAIPTLYAAVRAAVTGAIESDGSPAVVLCHVSHV
YPAGASLYFTVVCAEGPDPISRWDRAKRAAGDAIMANGGTITHHHAVGTDHRPWMPAEVGEVGVAVLRAVKAVLDPAGIL
NPGVLVPPPSE

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI4501993, Length=516, Percent_Identity=28.8759689922481, Blast_Score=236, Evalue=3e-62,
Organism=Homo sapiens, GI37595756, Length=519, Percent_Identity=26.3969171483622, Blast_Score=112, Evalue=8e-25,
Organism=Homo sapiens, GI37595754, Length=545, Percent_Identity=25.1376146788991, Blast_Score=105, Evalue=1e-22,
Organism=Escherichia coli, GI48994907, Length=524, Percent_Identity=27.8625954198473, Blast_Score=164, Evalue=1e-41,
Organism=Escherichia coli, GI1789351, Length=477, Percent_Identity=26.2054507337526, Blast_Score=93, Evalue=4e-20,
Organism=Caenorhabditis elegans, GI17556096, Length=510, Percent_Identity=30, Blast_Score=247, Evalue=1e-65,
Organism=Saccharomyces cerevisiae, GI6320027, Length=191, Percent_Identity=30.8900523560209, Blast_Score=87, Evalue=7e-18,
Organism=Saccharomyces cerevisiae, GI6320023, Length=254, Percent_Identity=25.5905511811024, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24653753, Length=490, Percent_Identity=31.6326530612245, Blast_Score=240, Evalue=2e-63,
Organism=Drosophila melanogaster, GI18921117, Length=463, Percent_Identity=23.110151187905, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24639277, Length=463, Percent_Identity=23.110151187905, Blast_Score=76, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24639275, Length=463, Percent_Identity=23.110151187905, Blast_Score=76, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: 2.5.1.26

Molecular weight: Translated: 59201; Mature: 59070

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTEATTAPADPVWWGWGAAAAHHPLPGAVRDLLDQLGIPSRPSAPVVLADITLPPVRLP
CCCCCCCCCCCCCEECCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
GEVLDELRAVVGAGHVRDDREARVRHCRGRSTVDLLRLRSGDASDAPDAVVAPLDHEQVL
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEECCCCHHHHH
AVLRICSRHRVIVVPFGGGTSVVGGLTPRLPPGQAPDGAPRWHGAVALDLHRLDGLLRVD
HHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCEEEC
QLSGTAVLGAGLRGPAAEALLAEHGLTLGHVPQSWEYATIGGFAATRSSGQASAGYGRFD
CCCCCEEEECCCCCHHHHHHHHHCCCEECCCCCCCCEEEECCHHHCCCCCCCCCCCCHHH
QLVTGLRLATPVGTWQPGRGPASAAGPDLRQLALGSEGAFGVITEVTVRVRPAPARRRYE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEECCCCHHHCCC
GWRVADLATGLDLLRELAQRDLLPTVLRLSDELETAAGLANAVSAGTDVSAGADAANAAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GPAGADAAADVTASGGCYLVTGYEGSEDEVTGRAAEVRAVLRDAGARPLGEDVGRDWAAG
CCCCCCCCCCEECCCCEEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCC
RFHAPYLRDALLDEGIFAETLETAGYWSAIPTLYAAVRAAVTGAIESDGSPAVVLCHVSH
CCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
VYPAGASLYFTVVCAEGPDPISRWDRAKRAAGDAIMANGGTITHHHAVGTDHRPWMPAEV
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCCHHH
GEVGVAVLRAVKAVLDPAGILNPGVLVPPPSE
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCCC
>Mature Secondary Structure 
TTEATTAPADPVWWGWGAAAAHHPLPGAVRDLLDQLGIPSRPSAPVVLADITLPPVRLP
CCCCCCCCCCCCEECCCHHCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCC
GEVLDELRAVVGAGHVRDDREARVRHCRGRSTVDLLRLRSGDASDAPDAVVAPLDHEQVL
HHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEECCCCHHHHH
AVLRICSRHRVIVVPFGGGTSVVGGLTPRLPPGQAPDGAPRWHGAVALDLHRLDGLLRVD
HHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHCCCEEEC
QLSGTAVLGAGLRGPAAEALLAEHGLTLGHVPQSWEYATIGGFAATRSSGQASAGYGRFD
CCCCCEEEECCCCCHHHHHHHHHCCCEECCCCCCCCEEEECCHHHCCCCCCCCCCCCHHH
QLVTGLRLATPVGTWQPGRGPASAAGPDLRQLALGSEGAFGVITEVTVRVRPAPARRRYE
HHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCEEEEEEEEEECCCCHHHCCC
GWRVADLATGLDLLRELAQRDLLPTVLRLSDELETAAGLANAVSAGTDVSAGADAANAAD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
GPAGADAAADVTASGGCYLVTGYEGSEDEVTGRAAEVRAVLRDAGARPLGEDVGRDWAAG
CCCCCCCCCCEECCCCEEEEECCCCCCHHHCCHHHHHHHHHHHCCCCCCHHHHCCCCCCC
RFHAPYLRDALLDEGIFAETLETAGYWSAIPTLYAAVRAAVTGAIESDGSPAVVLCHVSH
CCCCHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEECC
VYPAGASLYFTVVCAEGPDPISRWDRAKRAAGDAIMANGGTITHHHAVGTDHRPWMPAEV
CCCCCCEEEEEEEECCCCCHHHHHHHHHHHCCCEEEECCCEEEEECCCCCCCCCCCCHHH
GEVGVAVLRAVKAVLDPAGILNPGVLVPPPSE
HHHHHHHHHHHHHHHCCCCCCCCCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: 1-acyl-glycerone 3-phosphate; long-chain alcohol

Specific reaction: 1-acyl-glycerone 3-phosphate + a long-chain alcohol = an alkyl-glycerone 3-phosphate + a long-chain acid anion

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]