| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317271
Identifier: 158317271
GI number: 158317271
Start: 6688260
End: 6688559
Strand: Reverse
Name: 158317271
Synonym: Franean1_5519
Alternate gene names: NA
Gene position: 6688559-6688260 (Counterclockwise)
Preceding gene: 158317273
Following gene: 158317270
Centisome position: 74.47
GC content: 70.67
Gene sequence:
>300_bases ATGCCCATTTTCCCGTCCGGCAGCTTCGGCGCTTGGCGCACCCCCGGCAACGGTGAGAACCCGCTCGTCTCGGTGCGCGC TACCGACACCGGCTATGAGCTGCTCGTCCGTCCCGGTGCGGACGTCGGCGACCTGATGTCGGTCCTCGCGGGACTGCCCG TGGACGCCTTCTTCACCGAGCACTTCGGCGACGTTGACGCGGTCCTCGCGTTCCGCCGCGTGCCCGGTCTTTCGGCAACG GTCCTGGACGGCTGGAACCCCTCGACCGGCCCGGCGGCGGCGAGCGTTCCCCGCCTGTAG
Upstream 100 bases:
>100_bases CTGGACGGTCGTCCAGTCGAGATAGGCGGTCCCGGCGGGTGCTGCGAACACCCGACCGGGACCTGAGATCCCACCCTGCT CATGACAGGAGCGAGACCCT
Downstream 100 bases:
>100_bases CGGCTGTTCTGCCTGCTCTACCCCCATTTTTCTTCCGTTCTCTGGTGGCGCTTGAAGCTGTCGGGGTGTCGGACGTGTCC AGGGTCGGCCGGAGGCCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 99; Mature: 98
Protein sequence:
>99_residues MPIFPSGSFGAWRTPGNGENPLVSVRATDTGYELLVRPGADVGDLMSVLAGLPVDAFFTEHFGDVDAVLAFRRVPGLSAT VLDGWNPSTGPAAASVPRL
Sequences:
>Translated_99_residues MPIFPSGSFGAWRTPGNGENPLVSVRATDTGYELLVRPGADVGDLMSVLAGLPVDAFFTEHFGDVDAVLAFRRVPGLSAT VLDGWNPSTGPAAASVPRL >Mature_98_residues PIFPSGSFGAWRTPGNGENPLVSVRATDTGYELLVRPGADVGDLMSVLAGLPVDAFFTEHFGDVDAVLAFRRVPGLSATV LDGWNPSTGPAAASVPRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10298; Mature: 10167
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIFPSGSFGAWRTPGNGENPLVSVRATDTGYELLVRPGADVGDLMSVLAGLPVDAFFTE CCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHH HFGDVDAVLAFRRVPGLSATVLDGWNPSTGPAAASVPRL HCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC >Mature Secondary Structure PIFPSGSFGAWRTPGNGENPLVSVRATDTGYELLVRPGADVGDLMSVLAGLPVDAFFTE CCCCCCCCCCCCCCCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHHCCCCHHHHHH HFGDVDAVLAFRRVPGLSATVLDGWNPSTGPAAASVPRL HCCCHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA