Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317255

Identifier: 158317255

GI number: 158317255

Start: 6666554

End: 6668044

Strand: Direct

Name: 158317255

Synonym: Franean1_5502

Alternate gene names: NA

Gene position: 6666554-6668044 (Clockwise)

Preceding gene: 158317254

Following gene: 158317261

Centisome position: 74.22

GC content: 67.14

Gene sequence:

>1491_bases
GTGGACAGCGCGCGCGGCCATCGCATCGTCCGCGCACCGACCGGTCGTCGGCGGTCCTACCTGCGATCGACGATGCTGCG
TCTCGCCGTCCTCGCGCCGACCCTGTTGGCCGGGACGACGATCGCCGGCAGCGGCGCGGAGGCCTTGCCGGTGCCGGGAG
CCCTCATCGAGGACACGGCGATCGGTTCGGGGGTCTCCCAGGTCAGCTACTTCGGCGACTGGTCGGCGTGCACGCGGTGC
GGCCCGGCCACGCCCAACAATAGTTACCGGGAGTCGGTCCAGCCGTCGAGCGGCGCGGTGCTCCGGTTCTCCGGGACACA
GGTTGACGTCTACGGCGTCCTGGGCCCGTCCGGGGGCGTCGCGACGATCAGTGTCGATGGCGGGACACCGACCGCCGTCG
ACACCTACGCGGCGGCCGGTGCGGTGAGCCGCATCTACCAGTCCGGGTTGCTCAATCCCGGGATCCACACCGCGGTGATC
GTCAACATCGGCTGGCGCAACCCGGCTTCCAGTGGTGTTCGGGTCGCCTTCGACCGGGCCCAGGTGTTCGTCGAGCAGGG
CGGAGGGGATCCGGGGAACCGGTCGGGTCAGCCGTGGCTCTCCGGGGCGAACGGAGATCCGATCCAGAACTCGGCGAACG
TGGACACGTTCTGCGAGCGCCGGGGCAGTCCCTGCGACCTCGCTCATGTCTTCGTCTCCCGTAACAACTGGCAGAACATC
GTGCAGCCGTCCTGGACCCAGGCGAACTTCGCCGGATGGCCGGGCCGCCTCGTCATCTCGGTGCCTCCCTTCCCCGAGAA
CTCGGGGAGCACACTCACCGCCTGCGCATCGGGTGCCTACGACTCGCAGTGGCGCACGTTCGGCCAGACACTGAACTCCA
CCGGACGGCAGAACTCGATTATCCGTATCGCGTGGGAGGCGAACGGGAACTGGTACCAGTGGTCGGGTAGCAACCCGTCC
GCCTATGTGGGCTGTTGGCGGCGGATCGCCGACGCCATCAACTCCACGGCCGAGCCTGACCCGCTGCTCGACTGGACCAT
CAACGCGCACTACTCGCAGAACCCCGCGAGCCATAACCCGCTCGACCTGTACCCGGGCGACGCCTGGGTGGACATCGTGG
GCATCGACGCCTACGACCACTACCCGCCGTCCCGTACCCTCGCCGAGTTCAACAACCAGGCGAACGCGGTCGGGGGCATC
ACCTGGCTGTACAACTTCGCCCGCGCCCACAACAAGTTGTTCGGTGTCGGTGAATGGGGGGTCGTGAGCGGACGTAACGA
GAACGGTGCCGGGGACAACCCGAACTTCATCCAGTTCATGCGCGACTGGATGAATGCGCGCGCTGGACAGGGAATGTTCT
ACGAGAACTACTACAGCACCTGCGAGCCGCCGAATGTCGGGTCCAACCTGTACCGGCCGACCGGGCCGTCCTGCCTGTTC
ATCAACAACGCCTCCGCCCAGCGCTACACCGATCTGTGGAGCAGCCCTTAG

Upstream 100 bases:

>100_bases
GCCCGTGGGACCGAGCGATATGGAACCACGTATCGGCGGGCCGCCCGCCGGGCACCTGGATCAGCCGGGCGGCGGTACCT
CGGGGCGGCAGGGCGGCGGC

Downstream 100 bases:

>100_bases
AACTGACCGGTGACGGGGCGGGGCCTCCCGGCCGACCGGCCGGACGACGGTCCGCGCCCAGTGGCGCGGACACGCCTCCC
GGCGACCTTTCGCGCCGGGA

Product: hypothetical protein

Products: NA

Alternate protein names: Glycosidase; Alpha-N-Arabinofuranosidase; Beta-Mannanase; FHA Domain-Containing Protein; Methyl-Accepting Chemotaxis Sensory Transducer

Number of amino acids: Translated: 496; Mature: 496

Protein sequence:

>496_residues
MDSARGHRIVRAPTGRRRSYLRSTMLRLAVLAPTLLAGTTIAGSGAEALPVPGALIEDTAIGSGVSQVSYFGDWSACTRC
GPATPNNSYRESVQPSSGAVLRFSGTQVDVYGVLGPSGGVATISVDGGTPTAVDTYAAAGAVSRIYQSGLLNPGIHTAVI
VNIGWRNPASSGVRVAFDRAQVFVEQGGGDPGNRSGQPWLSGANGDPIQNSANVDTFCERRGSPCDLAHVFVSRNNWQNI
VQPSWTQANFAGWPGRLVISVPPFPENSGSTLTACASGAYDSQWRTFGQTLNSTGRQNSIIRIAWEANGNWYQWSGSNPS
AYVGCWRRIADAINSTAEPDPLLDWTINAHYSQNPASHNPLDLYPGDAWVDIVGIDAYDHYPPSRTLAEFNNQANAVGGI
TWLYNFARAHNKLFGVGEWGVVSGRNENGAGDNPNFIQFMRDWMNARAGQGMFYENYYSTCEPPNVGSNLYRPTGPSCLF
INNASAQRYTDLWSSP

Sequences:

>Translated_496_residues
MDSARGHRIVRAPTGRRRSYLRSTMLRLAVLAPTLLAGTTIAGSGAEALPVPGALIEDTAIGSGVSQVSYFGDWSACTRC
GPATPNNSYRESVQPSSGAVLRFSGTQVDVYGVLGPSGGVATISVDGGTPTAVDTYAAAGAVSRIYQSGLLNPGIHTAVI
VNIGWRNPASSGVRVAFDRAQVFVEQGGGDPGNRSGQPWLSGANGDPIQNSANVDTFCERRGSPCDLAHVFVSRNNWQNI
VQPSWTQANFAGWPGRLVISVPPFPENSGSTLTACASGAYDSQWRTFGQTLNSTGRQNSIIRIAWEANGNWYQWSGSNPS
AYVGCWRRIADAINSTAEPDPLLDWTINAHYSQNPASHNPLDLYPGDAWVDIVGIDAYDHYPPSRTLAEFNNQANAVGGI
TWLYNFARAHNKLFGVGEWGVVSGRNENGAGDNPNFIQFMRDWMNARAGQGMFYENYYSTCEPPNVGSNLYRPTGPSCLF
INNASAQRYTDLWSSP
>Mature_496_residues
MDSARGHRIVRAPTGRRRSYLRSTMLRLAVLAPTLLAGTTIAGSGAEALPVPGALIEDTAIGSGVSQVSYFGDWSACTRC
GPATPNNSYRESVQPSSGAVLRFSGTQVDVYGVLGPSGGVATISVDGGTPTAVDTYAAAGAVSRIYQSGLLNPGIHTAVI
VNIGWRNPASSGVRVAFDRAQVFVEQGGGDPGNRSGQPWLSGANGDPIQNSANVDTFCERRGSPCDLAHVFVSRNNWQNI
VQPSWTQANFAGWPGRLVISVPPFPENSGSTLTACASGAYDSQWRTFGQTLNSTGRQNSIIRIAWEANGNWYQWSGSNPS
AYVGCWRRIADAINSTAEPDPLLDWTINAHYSQNPASHNPLDLYPGDAWVDIVGIDAYDHYPPSRTLAEFNNQANAVGGI
TWLYNFARAHNKLFGVGEWGVVSGRNENGAGDNPNFIQFMRDWMNARAGQGMFYENYYSTCEPPNVGSNLYRPTGPSCLF
INNASAQRYTDLWSSP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 53303; Mature: 53303

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDSARGHRIVRAPTGRRRSYLRSTMLRLAVLAPTLLAGTTIAGSGAEALPVPGALIEDTA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHCCCC
IGSGVSQVSYFGDWSACTRCGPATPNNSYRESVQPSSGAVLRFSGTQVDVYGVLGPSGGV
CCCCHHHHHHCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEEECCCCCE
ATISVDGGTPTAVDTYAAAGAVSRIYQSGLLNPGIHTAVIVNIGWRNPASSGVRVAFDRA
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEE
QVFVEQGGGDPGNRSGQPWLSGANGDPIQNSANVDTFCERRGSPCDLAHVFVSRNNWQNI
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCC
VQPSWTQANFAGWPGRLVISVPPFPENSGSTLTACASGAYDSQWRTFGQTLNSTGRQNSI
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCE
IRIAWEANGNWYQWSGSNPSAYVGCWRRIADAINSTAEPDPLLDWTINAHYSQNPASHNP
EEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
LDLYPGDAWVDIVGIDAYDHYPPSRTLAEFNNQANAVGGITWLYNFARAHNKLFGVGEWG
CEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCC
VVSGRNENGAGDNPNFIQFMRDWMNARAGQGMFYENYYSTCEPPNVGSNLYRPTGPSCLF
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEE
INNASAQRYTDLWSSP
EECCCCHHHHHHCCCC
>Mature Secondary Structure
MDSARGHRIVRAPTGRRRSYLRSTMLRLAVLAPTLLAGTTIAGSGAEALPVPGALIEDTA
CCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCHHCCCC
IGSGVSQVSYFGDWSACTRCGPATPNNSYRESVQPSSGAVLRFSGTQVDVYGVLGPSGGV
CCCCHHHHHHCCCHHHHHCCCCCCCCCCHHHCCCCCCCEEEEEECCEEEEEEEECCCCCE
ATISVDGGTPTAVDTYAAAGAVSRIYQSGLLNPGIHTAVIVNIGWRNPASSGVRVAFDRA
EEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEEEEE
QVFVEQGGGDPGNRSGQPWLSGANGDPIQNSANVDTFCERRGSPCDLAHVFVSRNNWQNI
EEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCC
VQPSWTQANFAGWPGRLVISVPPFPENSGSTLTACASGAYDSQWRTFGQTLNSTGRQNSI
CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCE
IRIAWEANGNWYQWSGSNPSAYVGCWRRIADAINSTAEPDPLLDWTINAHYSQNPASHNP
EEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCCC
LDLYPGDAWVDIVGIDAYDHYPPSRTLAEFNNQANAVGGITWLYNFARAHNKLFGVGEWG
CEECCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCHHHHHHHHHHHHHHHCCEEECCCCC
VVSGRNENGAGDNPNFIQFMRDWMNARAGQGMFYENYYSTCEPPNVGSNLYRPTGPSCLF
EEECCCCCCCCCCCHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCEEE
INNASAQRYTDLWSSP
EECCCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA