| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pksS [H]
Identifier: 158317244
GI number: 158317244
Start: 6645147
End: 6646613
Strand: Direct
Name: pksS [H]
Synonym: Franean1_5491
Alternate gene names: 158317244
Gene position: 6645147-6646613 (Clockwise)
Preceding gene: 158317243
Following gene: 158317246
Centisome position: 73.98
GC content: 77.64
Gene sequence:
>1467_bases ATGACCCATCCCAACCCCCGCCAGCTCGGCACGTGCGCGAGCGGCATGCCCCGCGCGTTCGGCGCCGTCCGCCAGCTCGG CGCGCTGCGCCAGTACGGCGCGTCCTGCCCGGCACCGACCACCCGCCGCGGCGGGCCCGAGGACACCCCGTCCGGCGAGC CCGTGCCCGGACCATCCAGCGGCCCGCCGAGCGGACCGCGCGGCGGGCCGGTGCGCGGCACGGCGGGCGCCCACCCGCCG GCCCGGCCGGATCTCGACGCGCGCTGGCCGGCGCACGCCACCGCCGTCCGGCTACCGGCCGACGGCCCCGGGGACGACCG CGCCGCGTTCTACCGGCGTATCCGCGACGAGCACGGCCCGGTCGCCCCGGTCCTGCTCGAGGGGGACGTCCCGGCCTGGC TGGTGCTCGGCTACCGCGAGGTCGTCTACGTCGCCGGCACCCCGGCCCTGTTCGGCCGGGACTGCCGGATCTGGAACGCC TGGGATCTCGTCCCGCCGGCCTGGCCGCTGCAGTCGATGGTCGGCCAGCGGCCGTCGCTACGCGCCCTCGACGGGCCCGC CCACGCCCGCCGGCTGGGCGCCATCGGCGACGTGCTGGGCATGTTCGAGCCGCACGGCCTGCGGGCGCGGGCGGCCAGCG GCGCCGACGCCCTGATCGACGCGATGGCCAGCGACGGCCGCGCCGAACTCATGACCCAGTACGCCAGCCCGCTGCCGGCG ATGGTCGCAGCCGGGATGTGGGGGCTGCCCGACACCGACCTGACCGCGCTCGCCCGGGATCTGACCCTGCTCGTCAGCGG CGGGACGGGGGCCCGCGACGCGCGTCGGCGGGCCCACGCGATGCTCACCCGGGTGGTCCGGCGCCGCCGCGCGCAACCGG GCGACGACGCGGTGTCGGCGCTGCTCACCCATCCGGCCGGCCTGCGCGACGACGAGGTCGTCGAGGACGTCATGGCGACC CTGATCGCCGGCCAGGCGCCGACCGCGGACTGGATCGGGAACACGCTGCGGCTGATGCTGACCGACCCCCGGTTCGCCAC CGACCTCGCCGGTGGACGGCTCAGCGCGGGGGACGCGATGGCCGAGGTGCTGTGGGCGGACCCACCGATCCAGAACCTCG TCGCGCGGTGGGCCCGGCGCGACGTCCGGCTCGGCGGGCGCTGGATCCGCGCGGGCGACCTGCTCATCTTTGGCCTGTCG GCCGCGAACTCCGATCCGTGGGCGCGTCCCCAGCCCTCCGGGCGCCCGTCGGGCAACCACGCCCACCTGGCGTTCGGCCA CGGCGAGCACCGCTGCCCCTTCCCCGCCCAGATGACGGCCGAGACGATCGCGACCACCGCGATCGAGGTGCTCCTGGACC GCCTCCCCGATCTCGAGCTCGCCGTGGAGCCGCGGGACCTGCGCTGGCGCCCGTCGGTGTGGGCGCGTGGGGTCGCCGCG CTCCCGGTGCGCTTCACGCCCCCCTGA
Upstream 100 bases:
>100_bases CGCGCTCTGACGGCGTTGCCGGTCCGGTTCAGTCCCGTGTGAGGACCGCGACAGGCCGCACCGCGCGGCACCACGCTGAC CCTGAGGCCGGAGACAGCAC
Downstream 100 bases:
>100_bases GCGGCCCCGGCCAGGGCGCGTCCGCCCCGCCACCTGTCCCGGGGATCGGCGGGCGCGGCACCCCGACGGCGTCCAGGACC CCGGTCACCTCCGCCAGCAC
Product: putative cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 488; Mature: 487
Protein sequence:
>488_residues MTHPNPRQLGTCASGMPRAFGAVRQLGALRQYGASCPAPTTRRGGPEDTPSGEPVPGPSSGPPSGPRGGPVRGTAGAHPP ARPDLDARWPAHATAVRLPADGPGDDRAAFYRRIRDEHGPVAPVLLEGDVPAWLVLGYREVVYVAGTPALFGRDCRIWNA WDLVPPAWPLQSMVGQRPSLRALDGPAHARRLGAIGDVLGMFEPHGLRARAASGADALIDAMASDGRAELMTQYASPLPA MVAAGMWGLPDTDLTALARDLTLLVSGGTGARDARRRAHAMLTRVVRRRRAQPGDDAVSALLTHPAGLRDDEVVEDVMAT LIAGQAPTADWIGNTLRLMLTDPRFATDLAGGRLSAGDAMAEVLWADPPIQNLVARWARRDVRLGGRWIRAGDLLIFGLS AANSDPWARPQPSGRPSGNHAHLAFGHGEHRCPFPAQMTAETIATTAIEVLLDRLPDLELAVEPRDLRWRPSVWARGVAA LPVRFTPP
Sequences:
>Translated_488_residues MTHPNPRQLGTCASGMPRAFGAVRQLGALRQYGASCPAPTTRRGGPEDTPSGEPVPGPSSGPPSGPRGGPVRGTAGAHPP ARPDLDARWPAHATAVRLPADGPGDDRAAFYRRIRDEHGPVAPVLLEGDVPAWLVLGYREVVYVAGTPALFGRDCRIWNA WDLVPPAWPLQSMVGQRPSLRALDGPAHARRLGAIGDVLGMFEPHGLRARAASGADALIDAMASDGRAELMTQYASPLPA MVAAGMWGLPDTDLTALARDLTLLVSGGTGARDARRRAHAMLTRVVRRRRAQPGDDAVSALLTHPAGLRDDEVVEDVMAT LIAGQAPTADWIGNTLRLMLTDPRFATDLAGGRLSAGDAMAEVLWADPPIQNLVARWARRDVRLGGRWIRAGDLLIFGLS AANSDPWARPQPSGRPSGNHAHLAFGHGEHRCPFPAQMTAETIATTAIEVLLDRLPDLELAVEPRDLRWRPSVWARGVAA LPVRFTPP >Mature_487_residues THPNPRQLGTCASGMPRAFGAVRQLGALRQYGASCPAPTTRRGGPEDTPSGEPVPGPSSGPPSGPRGGPVRGTAGAHPPA RPDLDARWPAHATAVRLPADGPGDDRAAFYRRIRDEHGPVAPVLLEGDVPAWLVLGYREVVYVAGTPALFGRDCRIWNAW DLVPPAWPLQSMVGQRPSLRALDGPAHARRLGAIGDVLGMFEPHGLRARAASGADALIDAMASDGRAELMTQYASPLPAM VAAGMWGLPDTDLTALARDLTLLVSGGTGARDARRRAHAMLTRVVRRRRAQPGDDAVSALLTHPAGLRDDEVVEDVMATL IAGQAPTADWIGNTLRLMLTDPRFATDLAGGRLSAGDAMAEVLWADPPIQNLVARWARRDVRLGGRWIRAGDLLIFGLSA ANSDPWARPQPSGRPSGNHAHLAFGHGEHRCPFPAQMTAETIATTAIEVLLDRLPDLELAVEPRDLRWRPSVWARGVAAL PVRFTPP
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 52018; Mature: 51887
Theoretical pI: Translated: 8.97; Mature: 8.97
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHPNPRQLGTCASGMPRAFGAVRQLGALRQYGASCPAPTTRRGGPEDTPSGEPVPGPSS CCCCCHHHHCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPPSGPRGGPVRGTAGAHPPARPDLDARWPAHATAVRLPADGPGDDRAAFYRRIRDEHGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC VAPVLLEGDVPAWLVLGYREVVYVAGTPALFGRDCRIWNAWDLVPPAWPLQSMVGQRPSL EEEEEECCCCCEEEEECCEEEEEEECCCHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCC RALDGPAHARRLGAIGDVLGMFEPHGLRARAASGADALIDAMASDGRAELMTQYASPLPA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHH MVAAGMWGLPDTDLTALARDLTLLVSGGTGARDARRRAHAMLTRVVRRRRAQPGDDAVSA HHHCCCCCCCCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLTHPAGLRDDEVVEDVMATLIAGQAPTADWIGNTLRLMLTDPRFATDLAGGRLSAGDAM HHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEEECCCHHHHCCCCCCCCHHHH AEVLWADPPIQNLVARWARRDVRLGGRWIRAGDLLIFGLSAANSDPWARPQPSGRPSGNH HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCE AHLAFGHGEHRCPFPAQMTAETIATTAIEVLLDRLPDLELAVEPRDLRWRPSVWARGVAA EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCEE LPVRFTPP CCEEECCC >Mature Secondary Structure THPNPRQLGTCASGMPRAFGAVRQLGALRQYGASCPAPTTRRGGPEDTPSGEPVPGPSS CCCCHHHHCCHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCC GPPSGPRGGPVRGTAGAHPPARPDLDARWPAHATAVRLPADGPGDDRAAFYRRIRDEHGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCC VAPVLLEGDVPAWLVLGYREVVYVAGTPALFGRDCRIWNAWDLVPPAWPLQSMVGQRPSL EEEEEECCCCCEEEEECCEEEEEEECCCHHHCCCCEEECCCCCCCCCCCHHHHHCCCCCC RALDGPAHARRLGAIGDVLGMFEPHGLRARAASGADALIDAMASDGRAELMTQYASPLPA CCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHCCCHHHHHHHHHCCHHH MVAAGMWGLPDTDLTALARDLTLLVSGGTGARDARRRAHAMLTRVVRRRRAQPGDDAVSA HHHCCCCCCCCCHHHHHHHCEEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH LLTHPAGLRDDEVVEDVMATLIAGQAPTADWIGNTLRLMLTDPRFATDLAGGRLSAGDAM HHHCCCCCCHHHHHHHHHHHHHCCCCCCHHHHCCEEEEEEECCCHHHHCCCCCCCCHHHH AEVLWADPPIQNLVARWARRDVRLGGRWIRAGDLLIFGLSAANSDPWARPQPSGRPSGNH HHHHHCCCCHHHHHHHHHHHHHHCCCEEEEECCEEEEEEECCCCCCCCCCCCCCCCCCCE AHLAFGHGEHRCPFPAQMTAETIATTAIEVLLDRLPDLELAVEPRDLRWRPSVWARGVAA EEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHCCCEE LPVRFTPP CCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]