| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is pksS [H]
Identifier: 158317243
GI number: 158317243
Start: 6643775
End: 6645088
Strand: Direct
Name: pksS [H]
Synonym: Franean1_5490
Alternate gene names: 158317243
Gene position: 6643775-6645088 (Clockwise)
Preceding gene: 158317242
Following gene: 158317244
Centisome position: 73.97
GC content: 75.72
Gene sequence:
>1314_bases GTGACGACCGCCCGCGAGCCGGCGCGCGAGTCACTCCGCGGGCCGGCTCGCGAGCCGGCCCGCGAGCCGGCCCGCGCGGC GCGGGAGCGGCCGCCCGGCGGCCGGACCCCGCCCTGCCACCTGGGCGAGGCGCAGTTCCAGGGTGGGCCGGCGCGGGCCT ACCGCGACCTGCGCCGGAAGCACGGCGCCGTCGCGCCCGTGCTGCTCGACGGCGGCCTGCCGGCCTGGCTGGTCCTCGGC TACCGGGAGCTGCACTACGTCCTGAGCCATCCGGAGATCTTCGCCCATGACCCGCGTCACTGGGCCGGCTGGGACGACGT CCCGCCCGACTGGGCCGCCCTGCCCGGTGTCGGACACCGCCCGTCCGTGCTCCGCGCCGAGGGAGCGGAGCACCGGCGGC GCTACACCGCCATCCAGGACGTCCTCGGCGCGGTGGATCTCTTCGAGCTCCGGGCCCGCGCCGAGGAGATCACCGACGAC GTGATCGACGCCTTCGCCGGGCGCGGGGAGACCGATCTGATCGACTCGTTCGCGCACCGGGTGCCCGCCCTCGTCCTGGC GTCGCTGTGCGGGCCGCCGGAGGTCGACACCGCGGGCCTGGTGCACGACCTGATCGTCCTGATCGACGACGGCCCGGACG CGGCCGAGAGCCACCAGCGGGTCCTGGACCGGCTGCGGTGGCTGCTCGCCGACCGGCGCGAGCATCCCGACGACGACATC GTCTCGCGCCTGATCGCCCACCCGGCCGGGCTCGCCGACGAGGAGGTCGTCGAGGACCTCGCCGTGGTGTTCGGGTTCGG CGCGCGCGCCGTGGCCGGCTGGATCGGCAACTCGCTGCGCCTGCTGCTCACCGACGGGTCGTTCGCCCTCGACCTGTCCG GCGGACGGCGCAGCGTCATGCAGGCGCTGAACCAGGTCCTGTGGGAGGACACGCCGATGCAGGTCGTCGCCGGCCGGTGG GCGACCCGCAACACCCAGCTCGGCGGGCAGCGCATCGAGGCCGGCGACATGATCGCGCTCGGGCTCGGGGCCGGCAACGC CGATCCGCAGGTCCGCCGCGGCCACGCCCCGGACACCCAGACGGGCGCGGGGACCAGCGCCAACAGCGCCCACCTGTCCT TCGGCCACGGCGAGCACCGCTGCCCGTACCCCGCGCAGGAGATCGCCGAGGTCGTCACCCGGACCGCGGTCGAGGCACTC CTCGACCGCCTGCCCAACATGTGGATCGCCGTCCCGGCCGATGCCCTCGGCTGGCGGCGGACCGCGTGGAACCGCGCTCT GACGGCGTTGCCGGTCCGGTTCAGTCCCGTGTGA
Upstream 100 bases:
>100_bases ACGCCCGGGCCCGGTCGTCCAGCAAGGACGTGCTGATCACCCTCGTGCGCCACCTCTGCGAGCTGTCCGCGGCGCGCGAG GAGCGCGAGGCGGAGGCGTC
Downstream 100 bases:
>100_bases GGACCGCGACAGGCCGCACCGCGCGGCACCACGCTGACCCTGAGGCCGGAGACAGCACATGACCCATCCCAACCCCCGCC AGCTCGGCACGTGCGCGAGC
Product: putative cytochrome P450
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 437; Mature: 436
Protein sequence:
>437_residues MTTAREPARESLRGPAREPAREPARAARERPPGGRTPPCHLGEAQFQGGPARAYRDLRRKHGAVAPVLLDGGLPAWLVLG YRELHYVLSHPEIFAHDPRHWAGWDDVPPDWAALPGVGHRPSVLRAEGAEHRRRYTAIQDVLGAVDLFELRARAEEITDD VIDAFAGRGETDLIDSFAHRVPALVLASLCGPPEVDTAGLVHDLIVLIDDGPDAAESHQRVLDRLRWLLADRREHPDDDI VSRLIAHPAGLADEEVVEDLAVVFGFGARAVAGWIGNSLRLLLTDGSFALDLSGGRRSVMQALNQVLWEDTPMQVVAGRW ATRNTQLGGQRIEAGDMIALGLGAGNADPQVRRGHAPDTQTGAGTSANSAHLSFGHGEHRCPYPAQEIAEVVTRTAVEAL LDRLPNMWIAVPADALGWRRTAWNRALTALPVRFSPV
Sequences:
>Translated_437_residues MTTAREPARESLRGPAREPAREPARAARERPPGGRTPPCHLGEAQFQGGPARAYRDLRRKHGAVAPVLLDGGLPAWLVLG YRELHYVLSHPEIFAHDPRHWAGWDDVPPDWAALPGVGHRPSVLRAEGAEHRRRYTAIQDVLGAVDLFELRARAEEITDD VIDAFAGRGETDLIDSFAHRVPALVLASLCGPPEVDTAGLVHDLIVLIDDGPDAAESHQRVLDRLRWLLADRREHPDDDI VSRLIAHPAGLADEEVVEDLAVVFGFGARAVAGWIGNSLRLLLTDGSFALDLSGGRRSVMQALNQVLWEDTPMQVVAGRW ATRNTQLGGQRIEAGDMIALGLGAGNADPQVRRGHAPDTQTGAGTSANSAHLSFGHGEHRCPYPAQEIAEVVTRTAVEAL LDRLPNMWIAVPADALGWRRTAWNRALTALPVRFSPV >Mature_436_residues TTAREPARESLRGPAREPAREPARAARERPPGGRTPPCHLGEAQFQGGPARAYRDLRRKHGAVAPVLLDGGLPAWLVLGY RELHYVLSHPEIFAHDPRHWAGWDDVPPDWAALPGVGHRPSVLRAEGAEHRRRYTAIQDVLGAVDLFELRARAEEITDDV IDAFAGRGETDLIDSFAHRVPALVLASLCGPPEVDTAGLVHDLIVLIDDGPDAAESHQRVLDRLRWLLADRREHPDDDIV SRLIAHPAGLADEEVVEDLAVVFGFGARAVAGWIGNSLRLLLTDGSFALDLSGGRRSVMQALNQVLWEDTPMQVVAGRWA TRNTQLGGQRIEAGDMIALGLGAGNADPQVRRGHAPDTQTGAGTSANSAHLSFGHGEHRCPYPAQEIAEVVTRTAVEALL DRLPNMWIAVPADALGWRRTAWNRALTALPVRFSPV
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 47538; Mature: 47407
Theoretical pI: Translated: 6.17; Mature: 6.17
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTAREPARESLRGPAREPAREPARAARERPPGGRTPPCHLGEAQFQGGPARAYRDLRRK CCCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHH HGAVAPVLLDGGLPAWLVLGYRELHYVLSHPEIFAHDPRHWAGWDDVPPDWAALPGVGHR CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCHHHCCCCCCC PSVLRAEGAEHRRRYTAIQDVLGAVDLFELRARAEEITDDVIDAFAGRGETDLIDSFAHR CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VPALVLASLCGPPEVDTAGLVHDLIVLIDDGPDAAESHQRVLDRLRWLLADRREHPDDDI HHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH VSRLIAHPAGLADEEVVEDLAVVFGFGARAVAGWIGNSLRLLLTDGSFALDLSGGRRSVM HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHH QALNQVLWEDTPMQVVAGRWATRNTQLGGQRIEAGDMIALGLGAGNADPQVRRGHAPDTQ HHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCC TGAGTSANSAHLSFGHGEHRCPYPAQEIAEVVTRTAVEALLDRLPNMWIAVPADALGWRR CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH TAWNRALTALPVRFSPV HHHHHHHHHCCCCCCCC >Mature Secondary Structure TTAREPARESLRGPAREPAREPARAARERPPGGRTPPCHLGEAQFQGGPARAYRDLRRK CCCCCHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCHHHHHHHHHHH HGAVAPVLLDGGLPAWLVLGYRELHYVLSHPEIFAHDPRHWAGWDDVPPDWAALPGVGHR CCCCCEEEECCCCHHHHHHHHHHHHHHHCCCHHEECCCCCCCCCCCCCCCHHHCCCCCCC PSVLRAEGAEHRRRYTAIQDVLGAVDLFELRARAEEITDDVIDAFAGRGETDLIDSFAHR CCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH VPALVLASLCGPPEVDTAGLVHDLIVLIDDGPDAAESHQRVLDRLRWLLADRREHPDDDI HHHHHHHHHCCCCCCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHH VSRLIAHPAGLADEEVVEDLAVVFGFGARAVAGWIGNSLRLLLTDGSFALDLSGGRRSVM HHHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCEEEEEECCCEEEECCCCHHHHH QALNQVLWEDTPMQVVAGRWATRNTQLGGQRIEAGDMIALGLGAGNADPQVRRGHAPDTQ HHHHHHHCCCCCHHHHHCCCCCCCCCCCCCEECCCCEEEEEECCCCCCCCCCCCCCCCCC TGAGTSANSAHLSFGHGEHRCPYPAQEIAEVVTRTAVEALLDRLPNMWIAVPADALGWRR CCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHHHH TAWNRALTALPVRFSPV HHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]