Click here to switch to the map view.

The map label for this gene is 158317241

Identifier: 158317241

GI number: 158317241

Start: 6642315

End: 6642821

Strand: Direct

Name: 158317241

Synonym: Franean1_5488

Alternate gene names: NA

Gene position: 6642315-6642821 (Clockwise)

Preceding gene: 158317240

Following gene: 158317242

Centisome position: 73.95

GC content: 69.43

Gene sequence:

>507_bases
ATGACGACCAGCACAGCACTGGACGACCTGATTGGAGGCAGGGGCACGACCGGATGGGACCCACCCGCCCGGCGCCCCGC
GATCCCGATGAACACCACTGAGCGCGATCTCGACTGGCTGCTGGAAAACCTCCTCGCCCGCACCCCGGGGACCCGCCACG
CCCTGGTGCTATCCAGGGACGGGCTCAAGCTGTGCCGCTCGTCCGGACTGAGCATCGACCAGGCCGACCAACTGTCCGCG
ATCGCTTCGGGGATCCAGAGCCTCGCGCACGGCGCGTCGATCGAGTTCGGGGACGGCACCGGCGGCGTGCGGCAGTCGAT
GACCGAGTACCACGGCGGGCTGCTGTTCATCGTCGACGCCGGCCAGGGCGCGCACCTCGCGGTGATCGCCACCGACGACG
CCGACGCCGGCATCATCGGCCACAACATGAGCGAGCTCGTCGAACAGATCGGCGAGTACCTGAGCGCGGCGCCACGCGAT
CCCGTCCAGCCCGCGCTACTGCCATGA

Upstream 100 bases:

>100_bases
GCGGACGTCCCCGATGGCACCGGCGAGCCGGACCAGCAGGACACGTGACCTACCAGCGCCGCGTCACGACGAGCGTCCCA
CATGACGACCAGCGCCCTGC

Downstream 100 bases:

>100_bases
TCCGTCGGCTCGTCGACAGCGAGGACCCGGACCGCCTCTACACCGTCACCGGCGGCCGCAGCCGGGCCGGAGACACCGCC
TTCGACCTCGTCACGCTCGT

Product: roadblock/LC7 family protein

Products: NA

Alternate protein names: Roadblock/LC7 Domain-Containing Protein; Roadblock/LC7 Domain Protein; LC7 Family Protein; RarB Protein; Sensor Histidine Kinase; Sensor-Like Histidine Kinase; Roadblock Family Protein; RarB Roadblock/LC7 Protein

Number of amino acids: Translated: 168; Mature: 167

Protein sequence:

>168_residues
MTTSTALDDLIGGRGTTGWDPPARRPAIPMNTTERDLDWLLENLLARTPGTRHALVLSRDGLKLCRSSGLSIDQADQLSA
IASGIQSLAHGASIEFGDGTGGVRQSMTEYHGGLLFIVDAGQGAHLAVIATDDADAGIIGHNMSELVEQIGEYLSAAPRD
PVQPALLP

Sequences:

>Translated_168_residues
MTTSTALDDLIGGRGTTGWDPPARRPAIPMNTTERDLDWLLENLLARTPGTRHALVLSRDGLKLCRSSGLSIDQADQLSA
IASGIQSLAHGASIEFGDGTGGVRQSMTEYHGGLLFIVDAGQGAHLAVIATDDADAGIIGHNMSELVEQIGEYLSAAPRD
PVQPALLP
>Mature_167_residues
TTSTALDDLIGGRGTTGWDPPARRPAIPMNTTERDLDWLLENLLARTPGTRHALVLSRDGLKLCRSSGLSIDQADQLSAI
ASGIQSLAHGASIEFGDGTGGVRQSMTEYHGGLLFIVDAGQGAHLAVIATDDADAGIIGHNMSELVEQIGEYLSAAPRDP
VQPALLP

Specific function: Unknown

COG id: COG2018

COG function: function code R; Uncharacterized distant relative of homeotic protein bithoraxoid

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17609; Mature: 17478

Theoretical pI: Translated: 4.48; Mature: 4.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTSTALDDLIGGRGTTGWDPPARRPAIPMNTTERDLDWLLENLLARTPGTRHALVLSRD
CCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
GLKLCRSSGLSIDQADQLSAIASGIQSLAHGASIEFGDGTGGVRQSMTEYHGGLLFIVDA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEEC
GQGAHLAVIATDDADAGIIGHNMSELVEQIGEYLSAAPRDPVQPALLP
CCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TTSTALDDLIGGRGTTGWDPPARRPAIPMNTTERDLDWLLENLLARTPGTRHALVLSRD
CCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECC
GLKLCRSSGLSIDQADQLSAIASGIQSLAHGASIEFGDGTGGVRQSMTEYHGGLLFIVDA
HHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHHHHHCCCEEEEEEC
GQGAHLAVIATDDADAGIIGHNMSELVEQIGEYLSAAPRDPVQPALLP
CCCCEEEEEEECCCCCCEECCCHHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA