Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317240

Identifier: 158317240

GI number: 158317240

Start: 6640460

End: 6642262

Strand: Direct

Name: 158317240

Synonym: Franean1_5487

Alternate gene names: NA

Gene position: 6640460-6642262 (Clockwise)

Preceding gene: 158317237

Following gene: 158317241

Centisome position: 73.93

GC content: 76.54

Gene sequence:

>1803_bases
ATGTCAGAACACGCAATCGCTCGTCATCAGGTACAGCGACCAGCGACGGCCCGGGACCTGATCGTGCCGCCGACCGCGGC
CGTGCTCGTCGTCATGGTCATCGGCCTGGTCGCGGCGGCCGTGTCGCCCGCCGAGGGCCGCGGCGCGATCCTGTTCTGCG
TCTCGGTCGCCGCGCTGCTCGTCGGCTTCGCCAGCACCGTGGCCGTCCGCAACCGGCAGACCGTGCGGGAGCTGCGCGGC
CGGGTCGTCGCCCTGGAGACGCGCGCCAGCCGCTCGGCCGCCCAGACCGAACGGCTCGCCCGCGAGGTCCTCCCCGCGGT
GGTGGAACGCCTGCGCGAGGGGTCGTCCGTCCAGACGGCGCTCGGGGAGGCCCCGCGCGGCACCGAGGGCACGCACCAGC
ACATCCTGCGCACCGTCGCGGAGGAGGTCAGCCGCGGGGAGCGGATGCGCGGCGCGGCCATGGCGGCCTGCGCGAACGCG
GCCGGCCGGATGCAGGCGCTGAGCACCAGCATGCTCGCCGACCTTCGGGCCATGGAGGAACGGCACAGCGAGGAGGTCCT
CGGCGACCTGCTCCGGCTCGACCACCTCACCGCCCAGGCCGGCCGGCTCGCGGACAGCATCGCCGTGCTCACCGGCGGGC
GCTCCGGGCGCCGGTGGACGAAGCCGATCGTGATGGAGAGCCTCCTGCGGGGCTCCATGGGACGGATCAGCGCCTACCAG
CGGGTCCGCCTGCACTCGGTGAGCGCGGTCGCGGTGGTCGGCTACGCCGCCGAGGGCATCATGCACGCCCTCGCCGAGCT
GATGGACAACGCGACCAGCTTCTCGCCGCCCTCCGAGGAGGTGCATGTCTACGTCGAGGAGGTGCAGGCCGGGGTCGTCA
TCACCATCGAGGACGGCGGCCTCGTCATGGGGCCGGCCGCCCTCGAGCGGGCCGAGCGCGCGGTGTCGGCGGAGGTCCTC
GACCTGACCACGCTGTCCGGGACGCGGCTCGGCCTGGCGGTCGTCGGCGTCCTCGCCCGCAAGCACGGGCTGACGGTGTC
CTTCCGGCCCTCCTCACGCGGCGGCACCGGGGTCGTCGTCATGATCCCGCGCCAGCTCATCACCGCGCCGAGGTCGGTTG
TCGCCCCGCCGGCGGTCGCCGACTCCGCGGACACGGTCACCGCCGGGCTGCCCACGGTCGTGCCGTCCAGGCTGCCCGCG
CTCCTCTCCCCTGAGGCGAACGCGACGAGCGCGGGGACCACGGGCAAGGTGGGGAGCGCGGCGGGCGCGGCCACGGCGCG
AATCGCGGTCGACCCGGTCACCGAGTTCATCTCGCTGCCCCAGCGGAAGCCGGAGCACCCCGCGCGGCTCGACGCCAGCC
ACGCCGCCGCCTCGGCGCGCGCGGCCGGGGCGGCCCGCGAGGCGGCGCCGGACGCGACCACGGTCGCGAGCGCCGTCCCG
AGCCCGGCGCTGGCCGCGGACGCCGACGGGAGCACCGACGAGGCGGGCGCTCCGCCGCTGCTGACCCTGCCCAAGCGTGA
GCGCGGGCAGTCCCTCGCGGCGAGCGCACGCGCCGCGGCCCTGCTCGCCGCGCCGCCGCGCACCCACCGGCCACGCCGCA
ACTCCAGCGCGAACTTCGCCGCCTTCCGCCGGGCGATGCGCGCCGCCGGAACCAACCACGTCCGGCCCGCCGGGCCGGCG
CCCGGACGCGCGGGCGCGCTGGTCACGGCAGCCGCCACCGGCACCACGGCCAGCCCGTCGACAGCCCCCGGGGATGCGGA
CGTCCCCGATGGCACCGGCGAGCCGGACCAGCAGGACACGTGA

Upstream 100 bases:

>100_bases
GACCATGATCTTCCCGTGGGACGTTGGATTTTCCGTGGTCCCTCCCGACCACGGCAGGCCGGCCCTGGCCCACCGACCAC
CGACGACGAGGACCTGATCG

Downstream 100 bases:

>100_bases
CCTACCAGCGCCGCGTCACGACGAGCGTCCCACATGACGACCAGCGCCCTGCATGACGACCAGCACAGCACTGGACGACC
TGATTGGAGGCAGGGGCACG

Product: ATPase domain-containing protein

Products: NA

Alternate protein names: Histidine Kinase; Sensor Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Sensor With HAMP Domain; Large Secreted Protein; Integral Membrane Protein; Sensor Kinase; Sensor Protein; Sensor Histidine-Kinase; Signal Transduction Histidine Kinase; Two-Component System Histidine Kinase; Membrane C; Two-Component System Sensor Kinase; Signal Transduction Histidine Kinase-Like Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Nitrate And Nitrite Sensing Domain-Containing Protein; HAMP Domain Protein; LOW QUALITY PROTEIN Large Secreted Protein; Two Component Sensor Kinase; Nitrate/Nitrite-Sensing Histidine Kinase; HAMP Domain-Containing Histidine Kinase; LigA Protein; LOW QUALITY PROTEIN Sensor Histidine Kinase; Histidine Kinase HAMP Region Domain-Containing Protein; ATPase Domain-Containing Protein; RarA Histidine Kinase; LOW QUALITY PROTEIN HAMP Domain-Containing Protein; Nitrite/Nitrate Sensor Kinase

Number of amino acids: Translated: 600; Mature: 599

Protein sequence:

>600_residues
MSEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALLVGFASTVAVRNRQTVRELRG
RVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTALGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANA
AGRMQALSTSMLADLRAMEERHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ
RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGGLVMGPAALERAERAVSAEVL
DLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVVMIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPA
LLSPEANATSAGTTGKVGSAAGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP
SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFAAFRRAMRAAGTNHVRPAGPA
PGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT

Sequences:

>Translated_600_residues
MSEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALLVGFASTVAVRNRQTVRELRG
RVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTALGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANA
AGRMQALSTSMLADLRAMEERHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ
RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGGLVMGPAALERAERAVSAEVL
DLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVVMIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPA
LLSPEANATSAGTTGKVGSAAGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP
SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFAAFRRAMRAAGTNHVRPAGPA
PGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT
>Mature_599_residues
SEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALLVGFASTVAVRNRQTVRELRGR
VVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTALGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANAA
GRMQALSTSMLADLRAMEERHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQR
VRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGGLVMGPAALERAERAVSAEVLD
LTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVVMIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPAL
LSPEANATSAGTTGKVGSAAGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVPS
PALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFAAFRRAMRAAGTNHVRPAGPAP
GRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 61597; Mature: 61466

Theoretical pI: Translated: 10.43; Mature: 10.43

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALL
CCCCHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VGFASTVAVRNRQTVRELRGRVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTA
HHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANAAGRMQALSTSMLADLRAMEE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHH
RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEHHCCEEEEECCCC
LVMGPAALERAERAVSAEVLDLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVV
EEECHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE
MIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPALLSPEANATSAGTTGKVGSA
EECHHHHHCCHHHCCCCCCCCCCCCHHCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
AGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP
CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFA
CCCEECCCCCCCCCCCCCCEEECCCHHHCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH
AFRRAMRAAGTNHVRPAGPAPGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALL
CCCHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH
VGFASTVAVRNRQTVRELRGRVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTA
HHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
LGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANAAGRMQALSTSMLADLRAMEE
HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHH
RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEHHCCEEEEECCCC
LVMGPAALERAERAVSAEVLDLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVV
EEECHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE
MIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPALLSPEANATSAGTTGKVGSA
EECHHHHHCCHHHCCCCCCCCCCCCHHCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCC
AGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP
CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFA
CCCEECCCCCCCCCCCCCCEEECCCHHHCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH
AFRRAMRAAGTNHVRPAGPAPGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT
HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA