| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317240
Identifier: 158317240
GI number: 158317240
Start: 6640460
End: 6642262
Strand: Direct
Name: 158317240
Synonym: Franean1_5487
Alternate gene names: NA
Gene position: 6640460-6642262 (Clockwise)
Preceding gene: 158317237
Following gene: 158317241
Centisome position: 73.93
GC content: 76.54
Gene sequence:
>1803_bases ATGTCAGAACACGCAATCGCTCGTCATCAGGTACAGCGACCAGCGACGGCCCGGGACCTGATCGTGCCGCCGACCGCGGC CGTGCTCGTCGTCATGGTCATCGGCCTGGTCGCGGCGGCCGTGTCGCCCGCCGAGGGCCGCGGCGCGATCCTGTTCTGCG TCTCGGTCGCCGCGCTGCTCGTCGGCTTCGCCAGCACCGTGGCCGTCCGCAACCGGCAGACCGTGCGGGAGCTGCGCGGC CGGGTCGTCGCCCTGGAGACGCGCGCCAGCCGCTCGGCCGCCCAGACCGAACGGCTCGCCCGCGAGGTCCTCCCCGCGGT GGTGGAACGCCTGCGCGAGGGGTCGTCCGTCCAGACGGCGCTCGGGGAGGCCCCGCGCGGCACCGAGGGCACGCACCAGC ACATCCTGCGCACCGTCGCGGAGGAGGTCAGCCGCGGGGAGCGGATGCGCGGCGCGGCCATGGCGGCCTGCGCGAACGCG GCCGGCCGGATGCAGGCGCTGAGCACCAGCATGCTCGCCGACCTTCGGGCCATGGAGGAACGGCACAGCGAGGAGGTCCT CGGCGACCTGCTCCGGCTCGACCACCTCACCGCCCAGGCCGGCCGGCTCGCGGACAGCATCGCCGTGCTCACCGGCGGGC GCTCCGGGCGCCGGTGGACGAAGCCGATCGTGATGGAGAGCCTCCTGCGGGGCTCCATGGGACGGATCAGCGCCTACCAG CGGGTCCGCCTGCACTCGGTGAGCGCGGTCGCGGTGGTCGGCTACGCCGCCGAGGGCATCATGCACGCCCTCGCCGAGCT GATGGACAACGCGACCAGCTTCTCGCCGCCCTCCGAGGAGGTGCATGTCTACGTCGAGGAGGTGCAGGCCGGGGTCGTCA TCACCATCGAGGACGGCGGCCTCGTCATGGGGCCGGCCGCCCTCGAGCGGGCCGAGCGCGCGGTGTCGGCGGAGGTCCTC GACCTGACCACGCTGTCCGGGACGCGGCTCGGCCTGGCGGTCGTCGGCGTCCTCGCCCGCAAGCACGGGCTGACGGTGTC CTTCCGGCCCTCCTCACGCGGCGGCACCGGGGTCGTCGTCATGATCCCGCGCCAGCTCATCACCGCGCCGAGGTCGGTTG TCGCCCCGCCGGCGGTCGCCGACTCCGCGGACACGGTCACCGCCGGGCTGCCCACGGTCGTGCCGTCCAGGCTGCCCGCG CTCCTCTCCCCTGAGGCGAACGCGACGAGCGCGGGGACCACGGGCAAGGTGGGGAGCGCGGCGGGCGCGGCCACGGCGCG AATCGCGGTCGACCCGGTCACCGAGTTCATCTCGCTGCCCCAGCGGAAGCCGGAGCACCCCGCGCGGCTCGACGCCAGCC ACGCCGCCGCCTCGGCGCGCGCGGCCGGGGCGGCCCGCGAGGCGGCGCCGGACGCGACCACGGTCGCGAGCGCCGTCCCG AGCCCGGCGCTGGCCGCGGACGCCGACGGGAGCACCGACGAGGCGGGCGCTCCGCCGCTGCTGACCCTGCCCAAGCGTGA GCGCGGGCAGTCCCTCGCGGCGAGCGCACGCGCCGCGGCCCTGCTCGCCGCGCCGCCGCGCACCCACCGGCCACGCCGCA ACTCCAGCGCGAACTTCGCCGCCTTCCGCCGGGCGATGCGCGCCGCCGGAACCAACCACGTCCGGCCCGCCGGGCCGGCG CCCGGACGCGCGGGCGCGCTGGTCACGGCAGCCGCCACCGGCACCACGGCCAGCCCGTCGACAGCCCCCGGGGATGCGGA CGTCCCCGATGGCACCGGCGAGCCGGACCAGCAGGACACGTGA
Upstream 100 bases:
>100_bases GACCATGATCTTCCCGTGGGACGTTGGATTTTCCGTGGTCCCTCCCGACCACGGCAGGCCGGCCCTGGCCCACCGACCAC CGACGACGAGGACCTGATCG
Downstream 100 bases:
>100_bases CCTACCAGCGCCGCGTCACGACGAGCGTCCCACATGACGACCAGCGCCCTGCATGACGACCAGCACAGCACTGGACGACC TGATTGGAGGCAGGGGCACG
Product: ATPase domain-containing protein
Products: NA
Alternate protein names: Histidine Kinase; Sensor Histidine Kinase; Periplasmic Sensor Signal Transduction Histidine Kinase; Sensor With HAMP Domain; Large Secreted Protein; Integral Membrane Protein; Sensor Kinase; Sensor Protein; Sensor Histidine-Kinase; Signal Transduction Histidine Kinase; Two-Component System Histidine Kinase; Membrane C; Two-Component System Sensor Kinase; Signal Transduction Histidine Kinase-Like Protein; LOW QUALITY PROTEIN Integral Membrane Protein; Nitrate And Nitrite Sensing Domain-Containing Protein; HAMP Domain Protein; LOW QUALITY PROTEIN Large Secreted Protein; Two Component Sensor Kinase; Nitrate/Nitrite-Sensing Histidine Kinase; HAMP Domain-Containing Histidine Kinase; LigA Protein; LOW QUALITY PROTEIN Sensor Histidine Kinase; Histidine Kinase HAMP Region Domain-Containing Protein; ATPase Domain-Containing Protein; RarA Histidine Kinase; LOW QUALITY PROTEIN HAMP Domain-Containing Protein; Nitrite/Nitrate Sensor Kinase
Number of amino acids: Translated: 600; Mature: 599
Protein sequence:
>600_residues MSEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALLVGFASTVAVRNRQTVRELRG RVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTALGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANA AGRMQALSTSMLADLRAMEERHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGGLVMGPAALERAERAVSAEVL DLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVVMIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPA LLSPEANATSAGTTGKVGSAAGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFAAFRRAMRAAGTNHVRPAGPA PGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT
Sequences:
>Translated_600_residues MSEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALLVGFASTVAVRNRQTVRELRG RVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTALGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANA AGRMQALSTSMLADLRAMEERHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGGLVMGPAALERAERAVSAEVL DLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVVMIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPA LLSPEANATSAGTTGKVGSAAGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFAAFRRAMRAAGTNHVRPAGPA PGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT >Mature_599_residues SEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALLVGFASTVAVRNRQTVRELRGR VVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTALGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANAA GRMQALSTSMLADLRAMEERHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQR VRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGGLVMGPAALERAERAVSAEVLD LTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVVMIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPAL LSPEANATSAGTTGKVGSAAGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVPS PALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFAAFRRAMRAAGTNHVRPAGPAP GRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61597; Mature: 61466
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALL CCCCHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VGFASTVAVRNRQTVRELRGRVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTA HHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANAAGRMQALSTSMLADLRAMEE HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHH RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEHHCCEEEEECCCC LVMGPAALERAERAVSAEVLDLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVV EEECHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE MIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPALLSPEANATSAGTTGKVGSA EECHHHHHCCHHHCCCCCCCCCCCCHHCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCC AGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFA CCCEECCCCCCCCCCCCCCEEECCCHHHCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH AFRRAMRAAGTNHVRPAGPAPGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SEHAIARHQVQRPATARDLIVPPTAAVLVVMVIGLVAAAVSPAEGRGAILFCVSVAALL CCCHHHHHHHCCCCCCCCEECCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH VGFASTVAVRNRQTVRELRGRVVALETRASRSAAQTERLAREVLPAVVERLREGSSVQTA HHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LGEAPRGTEGTHQHILRTVAEEVSRGERMRGAAMAACANAAGRMQALSTSMLADLRAMEE HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RHSEEVLGDLLRLDHLTAQAGRLADSIAVLTGGRSGRRWTKPIVMESLLRGSMGRISAYQ HHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCHHHHHHHHHCCCHHHHHHHH RVRLHSVSAVAVVGYAAEGIMHALAELMDNATSFSPPSEEVHVYVEEVQAGVVITIEDGG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEHHCCEEEEECCCC LVMGPAALERAERAVSAEVLDLTTLSGTRLGLAVVGVLARKHGLTVSFRPSSRGGTGVVV EEECHHHHHHHHHHHHHHHHEEEECCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCEEEE MIPRQLITAPRSVVAPPAVADSADTVTAGLPTVVPSRLPALLSPEANATSAGTTGKVGSA EECHHHHHCCHHHCCCCCCCCCCCCHHCCCCHHHHHHCCHHCCCCCCCCCCCCCCCCCCC AGAATARIAVDPVTEFISLPQRKPEHPARLDASHAAASARAAGAAREAAPDATTVASAVP CCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHCC SPALAADADGSTDEAGAPPLLTLPKRERGQSLAASARAAALLAAPPRTHRPRRNSSANFA CCCEECCCCCCCCCCCCCCEEECCCHHHCHHHHHHHHHHHHEECCCCCCCCCCCCCCHHH AFRRAMRAAGTNHVRPAGPAPGRAGALVTAAATGTTASPSTAPGDADVPDGTGEPDQQDT HHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA