| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is nuoL [H]
Identifier: 158317235
GI number: 158317235
Start: 6630503
End: 6633046
Strand: Reverse
Name: nuoL [H]
Synonym: Franean1_5482
Alternate gene names: 158317235
Gene position: 6633046-6630503 (Counterclockwise)
Preceding gene: 158317236
Following gene: 158317234
Centisome position: 73.85
GC content: 76.49
Gene sequence:
>2544_bases GTGACCGCCGGGCCGTCCCACCCCCTGCTCGCCGCCGCGCTGATCACCAGCGTCGCCGCGCCGGGAACGGCGGTGGCCGC GCTGGCGGTGCCCATGTGGTTCGGCCGCCTGCGGTCCGAACGGATCATCGGCATGATCGTGGCCGCCGCGTTCACCGTCT CGACCCTCGCCTGCGCGGTGCTCGCCCTCGGCCTGATGGCGACCGGCCGGGACACGGTCGACGCCAGCATCGGCCCGTGG TTCGGCGCGCACGGCCACACCTTCGCCTGGAGCCTGACGGCGGACATGCTGTCCGTCCCGTTCGCGCTCGTCGCGGCCGT CCTCATCGGGCTCACCGGCGCCGTCTCCGCGCGCTACCTGCACCGAGAACCCGGATTCGCCCGTTTCCACCTCCTCCTCG TCCTGTTCGGGACGGGGGTGGAGCTCACCCTGGTCGCCGGCGAGCTTCCGGCGCTTTTCTTCGGCTGGGAGCTGGTCGGG CTGACCTCGGCGCTGCTCATCGCCTTCTTCGTGGAACGGCCCGGGCCCGTCCGGCACGGCCTGCGGGCCTTCCTCACCTA CCGCGCCGGCGACGCCGGCCTGCTCGTCGCGACGGTCTGGCTCGGGCACCTCGCCGGCACGGCCGGCGGCGACAGCGGCG GCCACGGCGGCAGGCACGGCCTCAGCTGGGACGACGTCCTGTCGTCACCCGGTGCCACCGCCCACGCGGAGATACTGGGC TTCCTGCTGCTGACCGCGGTGCTGGGGAAGTCGGCGCTGGTTCCGGTCGGCGGGTGGCTGCCGCGGGCGATGGAGGGGCC GACGCCGTCCAGCGCCGTGTTCTACGGGGCGGTGTCGATCCACCTGGGCCCCTACCTCCTGCTGCGGGCGCAGCCGATGC TGGACCACGCGCCGGCCGTCCGCGCCGCCCTCGTCTGCGTCGGGGCACTGACGGCGCTGCACGCGACGCTCGTCAGCCGG GCCCAGAGCGACGTCAAGAGCGCGCTCGCCTACGGGTCGATGACCCAGGTGGGGCTGATCGTCGCCGAGATCGGGCTGGG GCTGCACACGCTGGCGGTCCTGCACATCCTCGCCCACGCGACGCTGCGCTGCGCGCAGATCCTGCGCTCGCCCAGCGCGC TGCGCGACAGCCAGCGCCTGGAGCAGGCGCTGGGCGGCCAGGCCCCCGTGCCCGTATCGCGGCTGGGGCGGATCACGCCG GGACGGTGGCAGCCCCGGCTCTACCGGCACGCGTTCGAGAAGGGATACGCAGACGTGGTGCTTCGCCGAGTCGGAGGAGC CGCCGCCCGTGCGCTGACGGCGGTCGACCGCTGGCAGCGACAGGCCGCCGACCTGATCGGCGGCCGGGGCACCGACCCCG GCCTGCCCTCTCCGGCCCGCCCCACCGACGATGCCTCCGCCAGGGCCGCCGGGGACCTCCCGGCCGGGGCCCGGCCGCGG CAGCCTGCCGACACGCGGGCGGAGCCGCCGGCCGCGGCTGGGGCTGGGACCGCGCCCGCGGAACCGGAGCGCCGTCCCTC GGCCGACCCCAGGGCCCGGCACGGATCCGGGCCTTACGGCGCCGATTCCTACGCCCTGGACTTCTACGGCCCTGACCCGT GCGGCTCTGATCCGTGCGGCACGGACAACGCGGTCCCGGGCGAGGCCGCCCTGACGACCCGGCCGATCGTCGGGGAGACG GCGGATCCTGCTGCCGGTGCGGAGGTCGCTGAGGTGGCGGAGGCCTCGGGTCTGCAGGAGGCCCCCGCCGCGGCCGAGAC CGCCGGCAGCGCCGAGATCGCCGAGATCGCCGAGACCGCCGGGGATCCGGCGTGCCCCGGGGCGGGGGAGCATGGCGGGC CTGCCGAGGAGTCTGCGCCGGTGACCCGGCCGGCGGCCTCGTCCCGGCTACCGAACCTGCGCAAGCTTCCCGACCAGGCC CTACCGCCGGCGGTGTCCCGTCCCGGGGCGCCGTCGCGCCATGCGGAACCGTCCGCACCGCCCTGGCTGCCGGGCCCGCG CCCGGCGGCTGACGACCTCGCACCAGGCGCCGCGCCGTCGGATGCTGCGCCATCGGATGTCGCGCTGTCGGGCACCGCGC GGTCGGCCGCACCCTCGGACGGGGCCCCCGACGAGCACGATAGGCCGGGCGCGGCCGACGACCGGGGCTCGGTGAGCGAC CGAAGCCCAGTCGCCGGCCCGGGTCCAGTCGATGGTCTGGAACCGGCCGACGCTCCGGAGGCTGCGGACGATCCGGGCAC GGTTGGCGATCCGGCGGTAGATGTCGTGGGCACGGCGGACGCCCCGGAGGCGGTCGACGGTCCAGGGACTGCCGACGCCG CGGAAACGGTCGACGGTCCGGAGGCGACTCGGGGCCCGGAGGCGCCGGAGACGCCGGGGCCGGGCGGTCTGGCGCGCCGG GACGACGATCCCGCCACGCACCGCCTCCGCGCCAGGAACGGTTCGCCCACCGTCGGCGCCTCGCGTTGGCGCCACCAGGA GGACCGGCCCCGGTTCCCCGCGGATGTCCGCCCCGTCCGCCCCCGGGGAGGAGGGCCCTGGTGA
Upstream 100 bases:
>100_bases GCACGGTGGCCGCGGCGGGCGCGGGAGCCGCCCAGCCCACGCGGGACGCAATCGAGCTGCCGGAGCAGGCGAGCGGGCCG CTGCCCGCGCGGGACGGACA
Downstream 100 bases:
>100_bases CCGTCGCGGTCGTCCCGTTCGTCGCGGCCGCCTTCCTGCTCGCCGGCTCGGTGGCGGCGCGGCGGGCGCCGGACCCTCGG GCCGCCCGGGCCGCCGCGGC
Product: NADH dehydrogenase (quinone)
Products: NA
Alternate protein names: NADH dehydrogenase I subunit L; NDH-1 subunit L [H]
Number of amino acids: Translated: 847; Mature: 846
Protein sequence:
>847_residues MTAGPSHPLLAAALITSVAAPGTAVAALAVPMWFGRLRSERIIGMIVAAAFTVSTLACAVLALGLMATGRDTVDASIGPW FGAHGHTFAWSLTADMLSVPFALVAAVLIGLTGAVSARYLHREPGFARFHLLLVLFGTGVELTLVAGELPALFFGWELVG LTSALLIAFFVERPGPVRHGLRAFLTYRAGDAGLLVATVWLGHLAGTAGGDSGGHGGRHGLSWDDVLSSPGATAHAEILG FLLLTAVLGKSALVPVGGWLPRAMEGPTPSSAVFYGAVSIHLGPYLLLRAQPMLDHAPAVRAALVCVGALTALHATLVSR AQSDVKSALAYGSMTQVGLIVAEIGLGLHTLAVLHILAHATLRCAQILRSPSALRDSQRLEQALGGQAPVPVSRLGRITP GRWQPRLYRHAFEKGYADVVLRRVGGAAARALTAVDRWQRQAADLIGGRGTDPGLPSPARPTDDASARAAGDLPAGARPR QPADTRAEPPAAAGAGTAPAEPERRPSADPRARHGSGPYGADSYALDFYGPDPCGSDPCGTDNAVPGEAALTTRPIVGET ADPAAGAEVAEVAEASGLQEAPAAAETAGSAEIAEIAETAGDPACPGAGEHGGPAEESAPVTRPAASSRLPNLRKLPDQA LPPAVSRPGAPSRHAEPSAPPWLPGPRPAADDLAPGAAPSDAAPSDVALSGTARSAAPSDGAPDEHDRPGAADDRGSVSD RSPVAGPGPVDGLEPADAPEAADDPGTVGDPAVDVVGTADAPEAVDGPGTADAAETVDGPEATRGPEAPETPGPGGLARR DDDPATHRLRARNGSPTVGASRWRHQEDRPRFPADVRPVRPRGGGPW
Sequences:
>Translated_847_residues MTAGPSHPLLAAALITSVAAPGTAVAALAVPMWFGRLRSERIIGMIVAAAFTVSTLACAVLALGLMATGRDTVDASIGPW FGAHGHTFAWSLTADMLSVPFALVAAVLIGLTGAVSARYLHREPGFARFHLLLVLFGTGVELTLVAGELPALFFGWELVG LTSALLIAFFVERPGPVRHGLRAFLTYRAGDAGLLVATVWLGHLAGTAGGDSGGHGGRHGLSWDDVLSSPGATAHAEILG FLLLTAVLGKSALVPVGGWLPRAMEGPTPSSAVFYGAVSIHLGPYLLLRAQPMLDHAPAVRAALVCVGALTALHATLVSR AQSDVKSALAYGSMTQVGLIVAEIGLGLHTLAVLHILAHATLRCAQILRSPSALRDSQRLEQALGGQAPVPVSRLGRITP GRWQPRLYRHAFEKGYADVVLRRVGGAAARALTAVDRWQRQAADLIGGRGTDPGLPSPARPTDDASARAAGDLPAGARPR QPADTRAEPPAAAGAGTAPAEPERRPSADPRARHGSGPYGADSYALDFYGPDPCGSDPCGTDNAVPGEAALTTRPIVGET ADPAAGAEVAEVAEASGLQEAPAAAETAGSAEIAEIAETAGDPACPGAGEHGGPAEESAPVTRPAASSRLPNLRKLPDQA LPPAVSRPGAPSRHAEPSAPPWLPGPRPAADDLAPGAAPSDAAPSDVALSGTARSAAPSDGAPDEHDRPGAADDRGSVSD RSPVAGPGPVDGLEPADAPEAADDPGTVGDPAVDVVGTADAPEAVDGPGTADAAETVDGPEATRGPEAPETPGPGGLARR DDDPATHRLRARNGSPTVGASRWRHQEDRPRFPADVRPVRPRGGGPW >Mature_846_residues TAGPSHPLLAAALITSVAAPGTAVAALAVPMWFGRLRSERIIGMIVAAAFTVSTLACAVLALGLMATGRDTVDASIGPWF GAHGHTFAWSLTADMLSVPFALVAAVLIGLTGAVSARYLHREPGFARFHLLLVLFGTGVELTLVAGELPALFFGWELVGL TSALLIAFFVERPGPVRHGLRAFLTYRAGDAGLLVATVWLGHLAGTAGGDSGGHGGRHGLSWDDVLSSPGATAHAEILGF LLLTAVLGKSALVPVGGWLPRAMEGPTPSSAVFYGAVSIHLGPYLLLRAQPMLDHAPAVRAALVCVGALTALHATLVSRA QSDVKSALAYGSMTQVGLIVAEIGLGLHTLAVLHILAHATLRCAQILRSPSALRDSQRLEQALGGQAPVPVSRLGRITPG RWQPRLYRHAFEKGYADVVLRRVGGAAARALTAVDRWQRQAADLIGGRGTDPGLPSPARPTDDASARAAGDLPAGARPRQ PADTRAEPPAAAGAGTAPAEPERRPSADPRARHGSGPYGADSYALDFYGPDPCGSDPCGTDNAVPGEAALTTRPIVGETA DPAAGAEVAEVAEASGLQEAPAAAETAGSAEIAEIAETAGDPACPGAGEHGGPAEESAPVTRPAASSRLPNLRKLPDQAL PPAVSRPGAPSRHAEPSAPPWLPGPRPAADDLAPGAAPSDAAPSDVALSGTARSAAPSDGAPDEHDRPGAADDRGSVSDR SPVAGPGPVDGLEPADAPEAADDPGTVGDPAVDVVGTADAPEAVDGPGTADAAETVDGPEATRGPEAPETPGPGGLARRD DDPATHRLRARNGSPTVGASRWRHQEDRPRFPADVRPVRPRGGGPW
Specific function: NDH-1 shuttles electrons from NADH, via FMN and iron- sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocat
COG id: COG1009
COG function: function code CP; NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the complex I subunit 5 family [H]
Homologues:
Organism=Homo sapiens, GI251831117, Length=344, Percent_Identity=29.0697674418605, Blast_Score=128, Evalue=2e-29, Organism=Escherichia coli, GI1788614, Length=373, Percent_Identity=27.0777479892761, Blast_Score=115, Evalue=1e-26,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001750 - InterPro: IPR001516 - InterPro: IPR002128 - InterPro: IPR003945 - InterPro: IPR018393 [H]
Pfam domain/function: PF00361 Oxidored_q1; PF01010 Oxidored_q1_C; PF00662 Oxidored_q1_N [H]
EC number: =1.6.99.5 [H]
Molecular weight: Translated: 86071; Mature: 85940
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAGPSHPLLAAALITSVAAPGTAVAALAVPMWFGRLRSERIIGMIVAAAFTVSTLACAV CCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALGLMATGRDTVDASIGPWFGAHGHTFAWSLTADMLSVPFALVAAVLIGLTGAVSARYL HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HREPGFARFHLLLVLFGTGVELTLVAGELPALFFGWELVGLTSALLIAFFVERPGPVRHG HCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LRAFLTYRAGDAGLLVATVWLGHLAGTAGGDSGGHGGRHGLSWDDVLSSPGATAHAEILG HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH FLLLTAVLGKSALVPVGGWLPRAMEGPTPSSAVFYGAVSIHLGPYLLLRAQPMLDHAPAV HHHHHHHHCCCCEECCCCCCCHHCCCCCCCCEEEEEEEEHHHCCEEEEECCHHHHHHHHH RAALVCVGALTALHATLVSRAQSDVKSALAYGSMTQVGLIVAEIGLGLHTLAVLHILAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRCAQILRSPSALRDSQRLEQALGGQAPVPVSRLGRITPGRWQPRLYRHAFEKGYADVV HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LRRVGGAAARALTAVDRWQRQAADLIGGRGTDPGLPSPARPTDDASARAAGDLPAGARPR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPADTRAEPPAAAGAGTAPAEPERRPSADPRARHGSGPYGADSYALDFYGPDPCGSDPCG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC TDNAVPGEAALTTRPIVGETADPAAGAEVAEVAEASGLQEAPAAAETAGSAEIAEIAETA CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHC GDPACPGAGEHGGPAEESAPVTRPAASSRLPNLRKLPDQALPPAVSRPGAPSRHAEPSAP CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCC PWLPGPRPAADDLAPGAAPSDAAPSDVALSGTARSAAPSDGAPDEHDRPGAADDRGSVSD CCCCCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSPVAGPGPVDGLEPADAPEAADDPGTVGDPAVDVVGTADAPEAVDGPGTADAAETVDGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCC EATRGPEAPETPGPGGLARRDDDPATHRLRARNGSPTVGASRWRHQEDRPRFPADVRPVR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC PRGGGPW CCCCCCC >Mature Secondary Structure TAGPSHPLLAAALITSVAAPGTAVAALAVPMWFGRLRSERIIGMIVAAAFTVSTLACAV CCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LALGLMATGRDTVDASIGPWFGAHGHTFAWSLTADMLSVPFALVAAVLIGLTGAVSARYL HHHHHHHCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHH HREPGFARFHLLLVLFGTGVELTLVAGELPALFFGWELVGLTSALLIAFFVERPGPVRHG HCCCCHHHHHHHHHHHCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH LRAFLTYRAGDAGLLVATVWLGHLAGTAGGDSGGHGGRHGLSWDDVLSSPGATAHAEILG HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHH FLLLTAVLGKSALVPVGGWLPRAMEGPTPSSAVFYGAVSIHLGPYLLLRAQPMLDHAPAV HHHHHHHHCCCCEECCCCCCCHHCCCCCCCCEEEEEEEEHHHCCEEEEECCHHHHHHHHH RAALVCVGALTALHATLVSRAQSDVKSALAYGSMTQVGLIVAEIGLGLHTLAVLHILAHA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH TLRCAQILRSPSALRDSQRLEQALGGQAPVPVSRLGRITPGRWQPRLYRHAFEKGYADVV HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHH LRRVGGAAARALTAVDRWQRQAADLIGGRGTDPGLPSPARPTDDASARAAGDLPAGARPR HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC QPADTRAEPPAAAGAGTAPAEPERRPSADPRARHGSGPYGADSYALDFYGPDPCGSDPCG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCC TDNAVPGEAALTTRPIVGETADPAAGAEVAEVAEASGLQEAPAAAETAGSAEIAEIAETA CCCCCCCCHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHHHHHC GDPACPGAGEHGGPAEESAPVTRPAASSRLPNLRKLPDQALPPAVSRPGAPSRHAEPSAP CCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHCCHHHCCCCCCCCCCCCCCCCCCCC PWLPGPRPAADDLAPGAAPSDAAPSDVALSGTARSAAPSDGAPDEHDRPGAADDRGSVSD CCCCCCCCCHHHCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC RSPVAGPGPVDGLEPADAPEAADDPGTVGDPAVDVVGTADAPEAVDGPGTADAAETVDGP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCHHHCCCCC EATRGPEAPETPGPGGLARRDDDPATHRLRARNGSPTVGASRWRHQEDRPRFPADVRPVR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCC PRGGGPW CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 10761919 [H]