Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158317186

Identifier: 158317186

GI number: 158317186

Start: 6571911

End: 6572399

Strand: Reverse

Name: 158317186

Synonym: Franean1_5433

Alternate gene names: NA

Gene position: 6572399-6571911 (Counterclockwise)

Preceding gene: 158317187

Following gene: 158317185

Centisome position: 73.17

GC content: 62.99

Gene sequence:

>489_bases
TTGAGACAAGATCCACTGGAAGCGATCGGAAGCGGTCTGTTCGGTGGTGTTCACGCAGTGCCGGTCGACGGACTCGCGGC
GACCGGTCGACTGGTTGCCGAGCTTTACCACAAGCTCGACCTCAGGACGGCCTCGCCACGAGTGCGGACGCTGCACGTCC
GCGGCTCACGCTGTCGCACCTCCGCTGGTCTGTTTGACGAACTGGCAGCGGTTCTCCAGTTTCCCGCCTATTTCGGTGGT
AACTGGTCGGCTCTCCATGACAGCTTGTACGACTTCCAGGTACCGGCCGACGCTGTCATCCTCGTGTTTTCCGACTTCTC
CCAGGTGCTGTCCGAGGCCAAGAAGGAGGAGCTCGACTGGCTTCTCGAGGAGCTGACCGAGCTCTGTGGCGCGCCGCGGA
CACCCGCTCCCGGAGACCGAAGTGTCACGGCCCTTCTAACCGATCGTGCCGCGGGACTTTCCGTCGTCACAAAGCTGCTG
CCGGGCTGA

Upstream 100 bases:

>100_bases
CGTACGACGGCGTACAGAGAAATGATCGGCGATTCGTCGTCGGCGACGACGACGCGCATTACTACACCGACGACCACTAC
CAGAGCTGGGTGAGGTTCCG

Downstream 100 bases:

>100_bases
ACCAGACCAGCTCCGCGAGATTGAATAACGCAGGGGGTTGCGATGAGGCAGGTCGAGGACGCTGAGGCGCTGCAGGCCGA
GCTGTGTCGGCTTGTCCAGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRTSAGLFDELAAVLQFPAYFGG
NWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDWLLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLL
PG

Sequences:

>Translated_162_residues
MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRTSAGLFDELAAVLQFPAYFGG
NWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDWLLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLL
PG
>Mature_162_residues
MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRTSAGLFDELAAVLQFPAYFGG
NWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDWLLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLL
PG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17416; Mature: 17416

Theoretical pI: Translated: 5.21; Mature: 5.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRT
CCCCHHHHHHCHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
SAGLFDELAAVLQFPAYFGGNWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDW
HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLLPG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRT
CCCCHHHHHHCHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH
SAGLFDELAAVLQFPAYFGGNWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDW
HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
LLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLLPG
HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA