| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317186
Identifier: 158317186
GI number: 158317186
Start: 6571911
End: 6572399
Strand: Reverse
Name: 158317186
Synonym: Franean1_5433
Alternate gene names: NA
Gene position: 6572399-6571911 (Counterclockwise)
Preceding gene: 158317187
Following gene: 158317185
Centisome position: 73.17
GC content: 62.99
Gene sequence:
>489_bases TTGAGACAAGATCCACTGGAAGCGATCGGAAGCGGTCTGTTCGGTGGTGTTCACGCAGTGCCGGTCGACGGACTCGCGGC GACCGGTCGACTGGTTGCCGAGCTTTACCACAAGCTCGACCTCAGGACGGCCTCGCCACGAGTGCGGACGCTGCACGTCC GCGGCTCACGCTGTCGCACCTCCGCTGGTCTGTTTGACGAACTGGCAGCGGTTCTCCAGTTTCCCGCCTATTTCGGTGGT AACTGGTCGGCTCTCCATGACAGCTTGTACGACTTCCAGGTACCGGCCGACGCTGTCATCCTCGTGTTTTCCGACTTCTC CCAGGTGCTGTCCGAGGCCAAGAAGGAGGAGCTCGACTGGCTTCTCGAGGAGCTGACCGAGCTCTGTGGCGCGCCGCGGA CACCCGCTCCCGGAGACCGAAGTGTCACGGCCCTTCTAACCGATCGTGCCGCGGGACTTTCCGTCGTCACAAAGCTGCTG CCGGGCTGA
Upstream 100 bases:
>100_bases CGTACGACGGCGTACAGAGAAATGATCGGCGATTCGTCGTCGGCGACGACGACGCGCATTACTACACCGACGACCACTAC CAGAGCTGGGTGAGGTTCCG
Downstream 100 bases:
>100_bases ACCAGACCAGCTCCGCGAGATTGAATAACGCAGGGGGTTGCGATGAGGCAGGTCGAGGACGCTGAGGCGCTGCAGGCCGA GCTGTGTCGGCTTGTCCAGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 162; Mature: 162
Protein sequence:
>162_residues MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRTSAGLFDELAAVLQFPAYFGG NWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDWLLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLL PG
Sequences:
>Translated_162_residues MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRTSAGLFDELAAVLQFPAYFGG NWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDWLLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLL PG >Mature_162_residues MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRTSAGLFDELAAVLQFPAYFGG NWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDWLLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLL PG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17416; Mature: 17416
Theoretical pI: Translated: 5.21; Mature: 5.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 0.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRT CCCCHHHHHHCHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH SAGLFDELAAVLQFPAYFGGNWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDW HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLLPG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MRQDPLEAIGSGLFGGVHAVPVDGLAATGRLVAELYHKLDLRTASPRVRTLHVRGSRCRT CCCCHHHHHHCHHCCCCEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCHHHH SAGLFDELAAVLQFPAYFGGNWSALHDSLYDFQVPADAVILVFSDFSQVLSEAKKEELDW HCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LLEELTELCGAPRTPAPGDRSVTALLTDRAAGLSVVTKLLPG HHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA