Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158317157

Identifier: 158317157

GI number: 158317157

Start: 6519510

End: 6520766

Strand: Reverse

Name: 158317157

Synonym: Franean1_5404

Alternate gene names: NA

Gene position: 6520766-6519510 (Counterclockwise)

Preceding gene: 158317158

Following gene: 158317156

Centisome position: 72.6

GC content: 70.56

Gene sequence:

>1257_bases
ATGAGCGGGCCGTCCGCGCTGCTCGCACTGCGTTCGTCGCCGTTGCGGCGCTACCTGACCGGCCAGGTGCCGTCGGTGAC
CTGTTCCTGGGCGCAGGTCGTCGCGCTCGCCTGGGTGGTGGTCGATCTGGACCCTGCGGCGATGGGCTGGGTGGTGACGC
TGCAGTTCCTGCCCAGTCTGGTCCTGGGACCGTGGTTCGGCGCGGTCGTCGACCGGCACGACCGCCGCTGGCTGCTGATG
GGAGCCGAGGCCGGGCTCGGGCTGGTCGCGCTGGCGTACGCCGCCGCGTCCGCGGTGGGCGGTCTGACACTGCCGGTCGT
CTGCCTGCTCAGCGCCATCTGGGGCGTGGTCAACGCGCTCGACACGCCGGCCCGGCGAGCCCTGATACCGATGCTGGTTC
CGCCCGCTCACGCGCCGAGCGCATCAGCGCTGAGCGGAACCGTCCTGCTGCTCGGCATGACGGCCGGGTCCGGACTCGGC
GCCATCACAGTCGCCCAGGTCGGAGTCACCGTCACGTTCGCCGTGAACGCCGTGTCCTTCCTGGCCGACGTCGTTCTGCT
CGCCACGATCCGTGTCGGGCCCTCGCCGCGGGTCGCGCGGGCGCCCCGGCAGATACGCGAAGGCTTCGGCTATGTGTGGC
ACACGCCGCGCCTCCGGACGCCGTTGATCGGCCTGACGGTGGTCGCGACCTTCGCCTTCACCATCCAGACCTCTGTGCCG
ATCTTTGTTGCTCTCTCCTTCGACGGCGGCGCAAGCATGATCGGCACTGCCTTCATAGCGGTGACCGCGGGCAGCCTCGT
CGGCACGCTGGCCGCGGTCGCTCGGGGCATGCCCGGCCGGCACACCCTGCTGCGGGCCAACCTGGTCATGGCCGGAGCGA
TGACCGTGACCGCCGCTGCTCCCACGGTGCCGACCGCGCTCATCGGCCTGGCGGGCATCGGTCTCGCGTGGTCCTTCTTC
CTCGGGTCCGTGATCGCCATCCTGCAGACCGCCGAACCCGCGATGATGGGCCGAGTCATGTCGCTGTTCGCCGTCGTCCT
GCTTGGGGGCACCGCCGTCGGCGGTCCGATCGCCGCACTGCTGGCCACCGCCACCGGGGTGCGCGCGCCGTTCGTCCTCG
GAGCGGCGGCCGCCGTCGTGGCCGTCGCCATCTCATCGCGACCTCATGGCAACGCGATGTTGCCGAGCGGCTCGATGGTC
TGCTCCCATTTCCATGGACGATCAAGAGATGATCTGATTGCGGGTGGCGGCTGTTGA

Upstream 100 bases:

>100_bases
CCAAACGTCTGTGGCGCGCCACCCGGCGTCACTACTTCTCCGCGTTGGGAACCTACGCCTTCGGCGTCGCCCTCGCTGTC
GCCCTCCTCTTCACCCTGTG

Downstream 100 bases:

>100_bases
CGCTGTGTGACTAACCGTGGATGCGGCGGCAGGCAGTTCAGCTGATCATCTCCGACTCGGGGTGGACGGAACGCCGGCAT
GCCGTCCACCCTGAGACGAG

Product: major facilitator transporter

Products: NA

Alternate protein names: Integral Membrane Efflux Protein; Facilitator Superfamily Protein; Transmembrane Efflux Protein; Arabinose Efflux Permease Family Protein; Multidrug ABC Transporter; Facilitator Superfamily Permease; Mfs Transporter; Facilitator Superfamily Transporter; Facilitator Superfamily Multidrug Efflux Transporter; Drug Resistance Efflux Protein; MFS Superfamily Transporter

Number of amino acids: Translated: 418; Mature: 417

Protein sequence:

>418_residues
MSGPSALLALRSSPLRRYLTGQVPSVTCSWAQVVALAWVVVDLDPAAMGWVVTLQFLPSLVLGPWFGAVVDRHDRRWLLM
GAEAGLGLVALAYAAASAVGGLTLPVVCLLSAIWGVVNALDTPARRALIPMLVPPAHAPSASALSGTVLLLGMTAGSGLG
AITVAQVGVTVTFAVNAVSFLADVVLLATIRVGPSPRVARAPRQIREGFGYVWHTPRLRTPLIGLTVVATFAFTIQTSVP
IFVALSFDGGASMIGTAFIAVTAGSLVGTLAAVARGMPGRHTLLRANLVMAGAMTVTAAAPTVPTALIGLAGIGLAWSFF
LGSVIAILQTAEPAMMGRVMSLFAVVLLGGTAVGGPIAALLATATGVRAPFVLGAAAAVVAVAISSRPHGNAMLPSGSMV
CSHFHGRSRDDLIAGGGC

Sequences:

>Translated_418_residues
MSGPSALLALRSSPLRRYLTGQVPSVTCSWAQVVALAWVVVDLDPAAMGWVVTLQFLPSLVLGPWFGAVVDRHDRRWLLM
GAEAGLGLVALAYAAASAVGGLTLPVVCLLSAIWGVVNALDTPARRALIPMLVPPAHAPSASALSGTVLLLGMTAGSGLG
AITVAQVGVTVTFAVNAVSFLADVVLLATIRVGPSPRVARAPRQIREGFGYVWHTPRLRTPLIGLTVVATFAFTIQTSVP
IFVALSFDGGASMIGTAFIAVTAGSLVGTLAAVARGMPGRHTLLRANLVMAGAMTVTAAAPTVPTALIGLAGIGLAWSFF
LGSVIAILQTAEPAMMGRVMSLFAVVLLGGTAVGGPIAALLATATGVRAPFVLGAAAAVVAVAISSRPHGNAMLPSGSMV
CSHFHGRSRDDLIAGGGC
>Mature_417_residues
SGPSALLALRSSPLRRYLTGQVPSVTCSWAQVVALAWVVVDLDPAAMGWVVTLQFLPSLVLGPWFGAVVDRHDRRWLLMG
AEAGLGLVALAYAAASAVGGLTLPVVCLLSAIWGVVNALDTPARRALIPMLVPPAHAPSASALSGTVLLLGMTAGSGLGA
ITVAQVGVTVTFAVNAVSFLADVVLLATIRVGPSPRVARAPRQIREGFGYVWHTPRLRTPLIGLTVVATFAFTIQTSVPI
FVALSFDGGASMIGTAFIAVTAGSLVGTLAAVARGMPGRHTLLRANLVMAGAMTVTAAAPTVPTALIGLAGIGLAWSFFL
GSVIAILQTAEPAMMGRVMSLFAVVLLGGTAVGGPIAALLATATGVRAPFVLGAAAAVVAVAISSRPHGNAMLPSGSMVC
SHFHGRSRDDLIAGGGC

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42355; Mature: 42223

Theoretical pI: Translated: 11.69; Mature: 11.69

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGPSALLALRSSPLRRYLTGQVPSVTCSWAQVVALAWVVVDLDPAAMGWVVTLQFLPSL
CCCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
VLGPWFGAVVDRHDRRWLLMGAEAGLGLVALAYAAASAVGGLTLPVVCLLSAIWGVVNAL
HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
DTPARRALIPMLVPPAHAPSASALSGTVLLLGMTAGSGLGAITVAQVGVTVTFAVNAVSF
CCCHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHCEEEEHHHHHHHH
LADVVLLATIRVGPSPRVARAPRQIREGFGYVWHTPRLRTPLIGLTVVATFAFTIQTSVP
HHHHHHHHHHCCCCCCCHHCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHEECCCC
IFVALSFDGGASMIGTAFIAVTAGSLVGTLAAVARGMPGRHTLLRANLVMAGAMTVTAAA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECC
PTVPTALIGLAGIGLAWSFFLGSVIAILQTAEPAMMGRVMSLFAVVLLGGTAVGGPIAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LATATGVRAPFVLGAAAAVVAVAISSRPHGNAMLPSGSMVCSHFHGRSRDDLIAGGGC
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHCCCCCCCCEECCCCC
>Mature Secondary Structure 
SGPSALLALRSSPLRRYLTGQVPSVTCSWAQVVALAWVVVDLDPAAMGWVVTLQFLPSL
CCHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHHHHHHHHEECCCHHHHHHHHHHHHHHH
VLGPWFGAVVDRHDRRWLLMGAEAGLGLVALAYAAASAVGGLTLPVVCLLSAIWGVVNAL
HHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHC
DTPARRALIPMLVPPAHAPSASALSGTVLLLGMTAGSGLGAITVAQVGVTVTFAVNAVSF
CCCHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCCEEEEEHHCEEEEHHHHHHHH
LADVVLLATIRVGPSPRVARAPRQIREGFGYVWHTPRLRTPLIGLTVVATFAFTIQTSVP
HHHHHHHHHHCCCCCCCHHCCHHHHHHCCCEEEECCCCCCCHHHHHHHHHHHHHEECCCC
IFVALSFDGGASMIGTAFIAVTAGSLVGTLAAVARGMPGRHTLLRANLVMAGAMTVTAAA
EEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCEEEEECC
PTVPTALIGLAGIGLAWSFFLGSVIAILQTAEPAMMGRVMSLFAVVLLGGTAVGGPIAAL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHH
LATATGVRAPFVLGAAAAVVAVAISSRPHGNAMLPSGSMVCSHFHGRSRDDLIAGGGC
HHHHCCCCCHHHHHHHHHHHHHHHCCCCCCCEECCCCCHHHHHCCCCCCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA