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The map label for this gene is nodI [H]

Identifier: 158317156

GI number: 158317156

Start: 6519021

End: 6519326

Strand: Reverse

Name: nodI [H]

Synonym: Franean1_5403

Alternate gene names: 158317156

Gene position: 6519326-6519021 (Counterclockwise)

Preceding gene: 158317157

Following gene: 158317155

Centisome position: 72.58

GC content: 67.65

Gene sequence:

>306_bases
GTGGCTCCGGTTATCACGACTGGAGCCGCGATCATCGTCGAGGGGTTGACGAAGCGTTACGGCAGGATCACAGCGATCGA
TGACCTGTCGTTCAGTGTGCGTAGGGGCGCCGGCACCGGGTTTTTCGGACCGAACGGAGCCGGCAAGACCACAGCGCTCA
AGGTGATGGCCGGGCTAGCCCGGGCGAGCGCCGGGCAGGTGCTCGTCAACGGCAGCCAGGTGCGGTCTGCGGCACTCGAC
ACCGGGCTGCCCCCACGACGGGTGCCTGAGGTCCTCGCCCTCGTCGGTCTCGAGCAGGTGGCGTGA

Upstream 100 bases:

>100_bases
GTCCACCCTGAGACGAGCCGAGGGATCCGTCCGCGGGCCGATGACCGGGAGATCGGGCAGCCCGATTCTTCTGGCCATGA
GGATTTCACGAGCGGCGGAC

Downstream 100 bases:

>100_bases
CGGCGGGTTGGGAAGTACTCGCTTGGGATGCGGCAGCGGCTCGGGCTTGCGGCGGCGCTGCTCGGTGACCCGGACATCCT
GGTGCTGGACGAGCCGATGA

Product: putative ABC-transporter ATP-binding protein

Products: NA

Alternate protein names: Nodulation ATP-binding protein I [H]

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MAPVITTGAAIIVEGLTKRYGRITAIDDLSFSVRRGAGTGFFGPNGAGKTTALKVMAGLARASAGQVLVNGSQVRSAALD
TGLPPRRVPEVLALVGLEQVA

Sequences:

>Translated_101_residues
MAPVITTGAAIIVEGLTKRYGRITAIDDLSFSVRRGAGTGFFGPNGAGKTTALKVMAGLARASAGQVLVNGSQVRSAALD
TGLPPRRVPEVLALVGLEQVA
>Mature_100_residues
APVITTGAAIIVEGLTKRYGRITAIDDLSFSVRRGAGTGFFGPNGAGKTTALKVMAGLARASAGQVLVNGSQVRSAALDT
GLPPRRVPEVLALVGLEQVA

Specific function: Part of the ABC transporter complex NodIJ involved in the export of the nodulation factors (Nod factors), the bacterial signal molecules that induce symbiosis and subsequent nodulation induction. Nod factors are LCO (lipo-chitin oligosaccharide), a modifi

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell inner membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Escherichia coli, GI87081782, Length=74, Percent_Identity=41.8918918918919, Blast_Score=63, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015851
- InterPro:   IPR005978
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 10247; Mature: 10116

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAPVITTGAAIIVEGLTKRYGRITAIDDLSFSVRRGAGTGFFGPNGAGKTTALKVMAGLA
CCCCCCCCHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
RASAGQVLVNGSQVRSAALDTGLPPRRVPEVLALVGLEQVA
HCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
APVITTGAAIIVEGLTKRYGRITAIDDLSFSVRRGAGTGFFGPNGAGKTTALKVMAGLA
CCCCCCCHHHHHHHHHHHCCCEEEECCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHHH
RASAGQVLVNGSQVRSAALDTGLPPRRVPEVLALVGLEQVA
HCCCCEEEECCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11823852 [H]