| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317129
Identifier: 158317129
GI number: 158317129
Start: 6477492
End: 6478448
Strand: Reverse
Name: 158317129
Synonym: Franean1_5373
Alternate gene names: NA
Gene position: 6478448-6477492 (Counterclockwise)
Preceding gene: 158317130
Following gene: 158317128
Centisome position: 72.13
GC content: 70.74
Gene sequence:
>957_bases ATGTCAGAGAACCGCACATATCTGGTGATCGGAGCGCGTGGCTTCCAGGGAGACGCCGTGGCCCGAGCCCTGCTCGCCGA GGGCCTCGATGTCCGCGGGTTCGCCCGGGGCTCTGGTGCACCGGTCCCCGGCGCACCAGAGCTTCCGACCGTTCTGGGCG ACCTCGCCGAGCTCGACGACGTCCGCAAGGCCTTTGTCGGCGTCACGCACGCATCCGTGGTGCTGCCGCTGGTCTACGAC GTGGACCTGGTCCAGACCTATGCGCGCAATGTGGCCGCCGCCGCGCGTGAGGCGGGCGTGACCCGACTGGTCTACAACAC CAACACCCCATTGCCGGGGCAGGTCACCCCATACGCGGCCTATGAGACCCGCCGCGCCGCCGAGGCCGTGCTGGCGGACG GTGATCTGCCGACGGTCGTGCTGCGCCCGCCGGTGTACCTGGACAACCTGTTCAGCCCGTGGAACGGGCCCGCGCTGATC AACGACGGGGTGCTGGCCTATCCGCTGCCCGAGGGGTGCAGGGTCTCCTGGCTCTCGCACGCGGACCTGGCCACGGCCAC CCTCGCGGCCCTGCACGGTGAGGGGCTCGAGGGAACGGTGCTGTCGTTGGGCGGCCCCGACACGGTGACGGGAGGAGAGC TGGCACAGGTGTTCGCCGCCGCGCTCGGCAGGGACGTCGCCTACGTTCCGCTGGAGGTGAACGACTTCGAGACGGGGCTG CGGACGGTGCTCGCCACGCCTGCCGCGGCAGGCGTGGCGGGAATCTACCGGTGGGCCTGCACCGGCGGTGACGCCGAGCT CTTCGTCGCCGACCACGACGAGGTCGAGCGTGTCCTGGGCGTCCGCCTCACCCCGATCAACGAGTGGGTCGCTGCCCAGC CCTGGAAAATATGGGCGGCCGCCCGCTCGAACGGCGCCGGGACGCCGGATCCGGTCAGAGCCGACCATGGCAGTTGA
Upstream 100 bases:
>100_bases GGAGAGCTGAGCCCCCTGGGGGCGCATCACGACACAGCGACCGGTGCGTCCGCGGCCGCCGCCGGCCCACGACAGCACAG CGACGAAAGGGCGAGAAACC
Downstream 100 bases:
>100_bases GCGTCCCGGGGAGAGGCGGGAGGGCTCGGTCACCGTCGAAGGACGGGAGAGCGCGGTTGCCGTCATCGGCATGGGCTGTG AGCTGCCGTCCGCCCGTGGT
Product: NmrA family protein
Products: NA
Alternate protein names: Nucleoside-Diphosphate-Sugar Epimerase
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSENRTYLVIGARGFQGDAVARALLAEGLDVRGFARGSGAPVPGAPELPTVLGDLAELDDVRKAFVGVTHASVVLPLVYD VDLVQTYARNVAAAAREAGVTRLVYNTNTPLPGQVTPYAAYETRRAAEAVLADGDLPTVVLRPPVYLDNLFSPWNGPALI NDGVLAYPLPEGCRVSWLSHADLATATLAALHGEGLEGTVLSLGGPDTVTGGELAQVFAAALGRDVAYVPLEVNDFETGL RTVLATPAAAGVAGIYRWACTGGDAELFVADHDEVERVLGVRLTPINEWVAAQPWKIWAAARSNGAGTPDPVRADHGS
Sequences:
>Translated_318_residues MSENRTYLVIGARGFQGDAVARALLAEGLDVRGFARGSGAPVPGAPELPTVLGDLAELDDVRKAFVGVTHASVVLPLVYD VDLVQTYARNVAAAAREAGVTRLVYNTNTPLPGQVTPYAAYETRRAAEAVLADGDLPTVVLRPPVYLDNLFSPWNGPALI NDGVLAYPLPEGCRVSWLSHADLATATLAALHGEGLEGTVLSLGGPDTVTGGELAQVFAAALGRDVAYVPLEVNDFETGL RTVLATPAAAGVAGIYRWACTGGDAELFVADHDEVERVLGVRLTPINEWVAAQPWKIWAAARSNGAGTPDPVRADHGS >Mature_317_residues SENRTYLVIGARGFQGDAVARALLAEGLDVRGFARGSGAPVPGAPELPTVLGDLAELDDVRKAFVGVTHASVVLPLVYDV DLVQTYARNVAAAAREAGVTRLVYNTNTPLPGQVTPYAAYETRRAAEAVLADGDLPTVVLRPPVYLDNLFSPWNGPALIN DGVLAYPLPEGCRVSWLSHADLATATLAALHGEGLEGTVLSLGGPDTVTGGELAQVFAAALGRDVAYVPLEVNDFETGLR TVLATPAAAGVAGIYRWACTGGDAELFVADHDEVERVLGVRLTPINEWVAAQPWKIWAAARSNGAGTPDPVRADHGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33267; Mature: 33136
Theoretical pI: Translated: 4.43; Mature: 4.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 0.3 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSENRTYLVIGARGFQGDAVARALLAEGLDVRGFARGSGAPVPGAPELPTVLGDLAELDD CCCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH VRKAFVGVTHASVVLPLVYDVDLVQTYARNVAAAAREAGVTRLVYNTNTPLPGQVTPYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH YETRRAAEAVLADGDLPTVVLRPPVYLDNLFSPWNGPALINDGVLAYPLPEGCRVSWLSH HHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCEEECCCEEEEECCCCCEEEEECC ADLATATLAALHGEGLEGTVLSLGGPDTVTGGELAQVFAAALGRDVAYVPLEVNDFETGL CHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHH RTVLATPAAAGVAGIYRWACTGGDAELFVADHDEVERVLGVRLTPINEWVAAQPWKIWAA HHHHHCCHHHHHHHHHHEEEECCCEEEEEECHHHHHHHHCCEECCCHHHHCCCCEEEEEE ARSNGAGTPDPVRADHGS ECCCCCCCCCCCCCCCCC >Mature Secondary Structure SENRTYLVIGARGFQGDAVARALLAEGLDVRGFARGSGAPVPGAPELPTVLGDLAELDD CCCCEEEEEECCCCCHHHHHHHHHHCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHH VRKAFVGVTHASVVLPLVYDVDLVQTYARNVAAAAREAGVTRLVYNTNTPLPGQVTPYAA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCHH YETRRAAEAVLADGDLPTVVLRPPVYLDNLFSPWNGPALINDGVLAYPLPEGCRVSWLSH HHHHHHHHHHHCCCCCCEEEECCCHHHHHCCCCCCCCEEECCCEEEEECCCCCEEEEECC ADLATATLAALHGEGLEGTVLSLGGPDTVTGGELAQVFAAALGRDVAYVPLEVNDFETGL CHHHHHHHHHHHCCCCCCEEEECCCCCCCCCHHHHHHHHHHHCCCEEEEEEECCCHHHHH RTVLATPAAAGVAGIYRWACTGGDAELFVADHDEVERVLGVRLTPINEWVAAQPWKIWAA HHHHHCCHHHHHHHHHHEEEECCCEEEEEECHHHHHHHHCCEECCCHHHHCCCCEEEEEE ARSNGAGTPDPVRADHGS ECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA