| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317041
Identifier: 158317041
GI number: 158317041
Start: 6357875
End: 6358309
Strand: Direct
Name: 158317041
Synonym: Franean1_5285
Alternate gene names: NA
Gene position: 6357875-6358309 (Clockwise)
Preceding gene: 158317040
Following gene: 158317046
Centisome position: 70.78
GC content: 72.64
Gene sequence:
>435_bases ATGACGACTGCCGACTCACCACTCGGCGGCAGGCCGGCCGCGCCAGCACCCGGGCCCTCCCGGGAACCCCTGGCTTCCCG GGAGCCTGAGCCGCCGCCGGCGTCCGCGCCGTTCGCCGAGAAGATGGCCTACTACCGGTCCCAGCACACCACGCGGGGAA TCCGGGCGACCCATCTCGTGGGTATCCCCGGCGTGGCCTTCTCCCTGCCGCTGCTCGTCGGCCGACCCAAGGTGGGCCTG CCGATGTTCGTGGCGAGCTGGGCACTGCAGGTCGCCGGGCACTCGGTCTTCGAGCAGAACAGCCCCACGCTGGCCAAGGG CTTCGTCACCTACCAGCTGTGCGGGCTGGCGTTCTGGTGCGAGGAAGTCGCCGATCTGCTCGCCGGGCGCGGCCTGGGCG GTCAGACCCGCCCGCCACGCCGCTCCCGGACCTAG
Upstream 100 bases:
>100_bases CGCCCGCCGTGCCGGATGTAGGCGACCCACCAGCTCGGCTGGAGCTGCCCGCCCTCGTCGCCGATGATGTTCGGGGACGA GACGAAGCGAGGGGGCATCC
Downstream 100 bases:
>100_bases GTCCCGGACCTTGCGGGATCGGCCCAGCGGGACGCGCCTAGTTGCAACGGCACTTGTGCGTGACCTCGTCGTTGGTAATG GCGGCGTCGGGCCTGGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 144; Mature: 143
Protein sequence:
>144_residues MTTADSPLGGRPAAPAPGPSREPLASREPEPPPASAPFAEKMAYYRSQHTTRGIRATHLVGIPGVAFSLPLLVGRPKVGL PMFVASWALQVAGHSVFEQNSPTLAKGFVTYQLCGLAFWCEEVADLLAGRGLGGQTRPPRRSRT
Sequences:
>Translated_144_residues MTTADSPLGGRPAAPAPGPSREPLASREPEPPPASAPFAEKMAYYRSQHTTRGIRATHLVGIPGVAFSLPLLVGRPKVGL PMFVASWALQVAGHSVFEQNSPTLAKGFVTYQLCGLAFWCEEVADLLAGRGLGGQTRPPRRSRT >Mature_143_residues TTADSPLGGRPAAPAPGPSREPLASREPEPPPASAPFAEKMAYYRSQHTTRGIRATHLVGIPGVAFSLPLLVGRPKVGLP MFVASWALQVAGHSVFEQNSPTLAKGFVTYQLCGLAFWCEEVADLLAGRGLGGQTRPPRRSRT
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15289; Mature: 15158
Theoretical pI: Translated: 10.43; Mature: 10.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTADSPLGGRPAAPAPGPSREPLASREPEPPPASAPFAEKMAYYRSQHTTRGIRATHLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE GIPGVAFSLPLLVGRPKVGLPMFVASWALQVAGHSVFEQNSPTLAKGFVTYQLCGLAFWC CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH EEVADLLAGRGLGGQTRPPRRSRT HHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure TTADSPLGGRPAAPAPGPSREPLASREPEPPPASAPFAEKMAYYRSQHTTRGIRATHLV CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEE GIPGVAFSLPLLVGRPKVGLPMFVASWALQVAGHSVFEQNSPTLAKGFVTYQLCGLAFWC CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH EEVADLLAGRGLGGQTRPPRRSRT HHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA