| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317009
Identifier: 158317009
GI number: 158317009
Start: 6314658
End: 6315725
Strand: Reverse
Name: 158317009
Synonym: Franean1_5253
Alternate gene names: NA
Gene position: 6315725-6314658 (Counterclockwise)
Preceding gene: 158317010
Following gene: 158317008
Centisome position: 70.32
GC content: 75.28
Gene sequence:
>1068_bases ATGCCGGACCCGCGCCGCCGCCGGCGCCTGATCCTCGGCGCGGGCGCGCTGCTCGCCGTGATCCTCGGGGTGGGCTTCAT CGCTGCCGGAACGGACGGCGCCGGCACGAACTCGGCGGACACGGCGGCCGTCCCGATGCCGGCGTCCGAGCCCGGTACAC CCGGCGAGATGAGCACGTCGGCGGACTCCAGCGCGTCGGCGTCGGCGTCGGCGCCGTCGTCGGCGCCCGGTGCGGCCCGG GCGGACGGCATCGCCGCGGGAGCGCCGTCGACCGTCCCGGGCGGGCCCGGTGGCACCGGCGGCACCGGCGGCGAGCCCGC CCGGCCCGCCGGCGCCCAGCCGCGGATCGTCCGCAACGGCACGGCCACGCTGTCCGTGCCGGCCGGTGCCGTGGACAAGG CGGTCCAGGATCTCTCCGCGGCGGCGCGGGGGCTTGCGGGGTACACCGAGTCCAGCGAGGTCAGCGGCACTCCGTCGACC ACTGATGACGGCAGCCAGTACGCCACCGTGACCCTGCGGGTGCCGAGCGAGTCGTTCGACGAGCTGCGGTCCGGCCTGAG CCGGATCGGCACGGTGTCGGCGTCGACGATGTCCTCGCGCGACGTGACCGGGGAGTACGTCGATCTCGAGGCGCGCAAGC GCGCGCTGGAGGCCTCCCGCACCGCCTACACGACGCTGCTCTCCAATGCCACCACGGTGGGGGAGACGCTGTCGGTGCAG CAGGCCATCGACGGCGTGCAGATCCAGATCGAGCAGATCGAGGGCCAGCGGATGGTCCTCGCCGACGCCAGCGACCTCGC GACGTTGACGGTGCAGATCGCCGAGGACGGAGCGGACCCCGCACCCGGGCCGGACGATGACGACTCGGGGCTGGTCGCTG CCGCGCGGACATCCTGGAACCGTTTTGTCCGCGGTATCGAGGAGATCATCGCGCTGCTCGGCCCGCTGGCGCTGGTCGGC CTGGTCGCCGCGTGCGTCTACGGGGCCGTCCGGATCGCGCGCCGGTGGGGCTGGATCCCGACGACCCCGGCCCCGCCCGC GCCGCCGCGGGACTCGGCGGGGTCGTAA
Upstream 100 bases:
>100_bases CGCGGGCGGGCAGCCGGGGCAGCCCGGTCCGGCCGCCCCTCCCGGTCCGTTCGGGGCGCCCGGCCGGAACGAGCGGCCCT GGTCGTCCCGCCTGCCGGCC
Downstream 100 bases:
>100_bases ACGGGTCGGTGCGCTCTGGCACGGACGGGGTCCGGAGCGGCACGATGGACGGGCACACGCAGGCCGCCGGCGACCGGCCC CGACACGGACGTCGGTGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: Lipoprotein
Number of amino acids: Translated: 355; Mature: 354
Protein sequence:
>355_residues MPDPRRRRRLILGAGALLAVILGVGFIAAGTDGAGTNSADTAAVPMPASEPGTPGEMSTSADSSASASASAPSSAPGAAR ADGIAAGAPSTVPGGPGGTGGTGGEPARPAGAQPRIVRNGTATLSVPAGAVDKAVQDLSAAARGLAGYTESSEVSGTPST TDDGSQYATVTLRVPSESFDELRSGLSRIGTVSASTMSSRDVTGEYVDLEARKRALEASRTAYTTLLSNATTVGETLSVQ QAIDGVQIQIEQIEGQRMVLADASDLATLTVQIAEDGADPAPGPDDDDSGLVAAARTSWNRFVRGIEEIIALLGPLALVG LVAACVYGAVRIARRWGWIPTTPAPPAPPRDSAGS
Sequences:
>Translated_355_residues MPDPRRRRRLILGAGALLAVILGVGFIAAGTDGAGTNSADTAAVPMPASEPGTPGEMSTSADSSASASASAPSSAPGAAR ADGIAAGAPSTVPGGPGGTGGTGGEPARPAGAQPRIVRNGTATLSVPAGAVDKAVQDLSAAARGLAGYTESSEVSGTPST TDDGSQYATVTLRVPSESFDELRSGLSRIGTVSASTMSSRDVTGEYVDLEARKRALEASRTAYTTLLSNATTVGETLSVQ QAIDGVQIQIEQIEGQRMVLADASDLATLTVQIAEDGADPAPGPDDDDSGLVAAARTSWNRFVRGIEEIIALLGPLALVG LVAACVYGAVRIARRWGWIPTTPAPPAPPRDSAGS >Mature_354_residues PDPRRRRRLILGAGALLAVILGVGFIAAGTDGAGTNSADTAAVPMPASEPGTPGEMSTSADSSASASASAPSSAPGAARA DGIAAGAPSTVPGGPGGTGGTGGEPARPAGAQPRIVRNGTATLSVPAGAVDKAVQDLSAAARGLAGYTESSEVSGTPSTT DDGSQYATVTLRVPSESFDELRSGLSRIGTVSASTMSSRDVTGEYVDLEARKRALEASRTAYTTLLSNATTVGETLSVQQ AIDGVQIQIEQIEGQRMVLADASDLATLTVQIAEDGADPAPGPDDDDSGLVAAARTSWNRFVRGIEEIIALLGPLALVGL VAACVYGAVRIARRWGWIPTTPAPPAPPRDSAGS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35501; Mature: 35369
Theoretical pI: Translated: 4.39; Mature: 4.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDPRRRRRLILGAGALLAVILGVGFIAAGTDGAGTNSADTAAVPMPASEPGTPGEMSTS CCCHHHHHEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADSSASASASAPSSAPGAARADGIAAGAPSTVPGGPGGTGGTGGEPARPAGAQPRIVRNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC TATLSVPAGAVDKAVQDLSAAARGLAGYTESSEVSGTPSTTDDGSQYATVTLRVPSESFD CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHH ELRSGLSRIGTVSASTMSSRDVTGEYVDLEARKRALEASRTAYTTLLSNATTVGETLSVQ HHHHHHHHHHCCCHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QAIDGVQIQIEQIEGQRMVLADASDLATLTVQIAEDGADPAPGPDDDDSGLVAAARTSWN HHHCCEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHH RFVRGIEEIIALLGPLALVGLVAACVYGAVRIARRWGWIPTTPAPPAPPRDSAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure PDPRRRRRLILGAGALLAVILGVGFIAAGTDGAGTNSADTAAVPMPASEPGTPGEMSTS CCHHHHHEEEECHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ADSSASASASAPSSAPGAARADGIAAGAPSTVPGGPGGTGGTGGEPARPAGAQPRIVRNG CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEECC TATLSVPAGAVDKAVQDLSAAARGLAGYTESSEVSGTPSTTDDGSQYATVTLRVPSESFD CEEEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCHHHH ELRSGLSRIGTVSASTMSSRDVTGEYVDLEARKRALEASRTAYTTLLSNATTVGETLSVQ HHHHHHHHHHCCCHHHCCCCCCCCCEECHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH QAIDGVQIQIEQIEGQRMVLADASDLATLTVQIAEDGADPAPGPDDDDSGLVAAARTSWN HHHCCEEEEEEECCCCEEEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCEEEEHHHHHH RFVRGIEEIIALLGPLALVGLVAACVYGAVRIARRWGWIPTTPAPPAPPRDSAGS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA