| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158317008
Identifier: 158317008
GI number: 158317008
Start: 6314054
End: 6314530
Strand: Reverse
Name: 158317008
Synonym: Franean1_5252
Alternate gene names: NA
Gene position: 6314530-6314054 (Counterclockwise)
Preceding gene: 158317009
Following gene: 158317007
Centisome position: 70.3
GC content: 74.21
Gene sequence:
>477_bases ATGCCCGAGGCAGGCGAGGAATCCGGATCGGGGCTGACCAGCGCCCGCTGGACGCACGTCGCCCTGCCCTCCAGCGACCT CGACGCCTCGATCGCCTTCTACACGTCGATGACCCCGCTGGTCGTCGTGGCGGTCCGCGAGGACGCCGCCGGCCGCAGCG CCTGGCTCTCCAACGAGGGGCAGTGGCGGACGCCGTTCGTCCTGGTGCTGGTGGACTTCGCCCGGGAGCGCGGCGCCCGG CATCCGATCATGACGCCGTTCGCGCACCTCGGGATCGAGGTCCCGCGCCGGGCCGACGTGGACGACGCGGCGGCGCGGGC CCGGGCCGCCGGCTGCCTGCACTGGGAGCCGCAGGACCTGCCGGACCCGGTCGGCTACGTCTGCGCGCTGACGGACCCCG ACGGCAACGTGATCGAGATCAGCCACGGCCAGCGGGTCTTCTCGACGGTGCGTGACCTGTGGGGGCCGCGCGGCTGA
Upstream 100 bases:
>100_bases GGGTCCGGAGCGGCACGATGGACGGGCACACGCAGGCCGCCGGCGACCGGCCCCGACACGGACGTCGGTGCCGGTGCCGG CCGGGGACGGGAGCGCCGGG
Downstream 100 bases:
>100_bases CCGTCCAGCGCCGCGCCTTGACGTGGTCTCGTTCGGCGATCGCGGTGCGTGACGGGGAGCGGGGCCGGTCCGGTGGGGTG GGGGAGCGGAATCATCCGGG
Product: glyoxalase/bleomycin resistance protein/dioxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 158; Mature: 157
Protein sequence:
>158_residues MPEAGEESGSGLTSARWTHVALPSSDLDASIAFYTSMTPLVVVAVREDAAGRSAWLSNEGQWRTPFVLVLVDFARERGAR HPIMTPFAHLGIEVPRRADVDDAAARARAAGCLHWEPQDLPDPVGYVCALTDPDGNVIEISHGQRVFSTVRDLWGPRG
Sequences:
>Translated_158_residues MPEAGEESGSGLTSARWTHVALPSSDLDASIAFYTSMTPLVVVAVREDAAGRSAWLSNEGQWRTPFVLVLVDFARERGAR HPIMTPFAHLGIEVPRRADVDDAAARARAAGCLHWEPQDLPDPVGYVCALTDPDGNVIEISHGQRVFSTVRDLWGPRG >Mature_157_residues PEAGEESGSGLTSARWTHVALPSSDLDASIAFYTSMTPLVVVAVREDAAGRSAWLSNEGQWRTPFVLVLVDFARERGARH PIMTPFAHLGIEVPRRADVDDAAARARAAGCLHWEPQDLPDPVGYVCALTDPDGNVIEISHGQRVFSTVRDLWGPRG
Specific function: Unknown
COG id: COG0346
COG function: function code E; Lactoylglutathione lyase and related lyases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004360 [H]
Pfam domain/function: PF00903 Glyoxalase [H]
EC number: NA
Molecular weight: Translated: 17145; Mature: 17014
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPEAGEESGSGLTSARWTHVALPSSDLDASIAFYTSMTPLVVVAVREDAAGRSAWLSNEG CCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEECCCC QWRTPFVLVLVDFARERGARHPIMTPFAHLGIEVPRRADVDDAAARARAAGCLHWEPQDL CCCCCEEEEEEHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC PDPVGYVCALTDPDGNVIEISHGQRVFSTVRDLWGPRG CCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCC >Mature Secondary Structure PEAGEESGSGLTSARWTHVALPSSDLDASIAFYTSMTPLVVVAVREDAAGRSAWLSNEG CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCEEEEEEECCCCCCCCEEECCCC QWRTPFVLVLVDFARERGARHPIMTPFAHLGIEVPRRADVDDAAARARAAGCLHWEPQDL CCCCCEEEEEEHHHHHCCCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHCCCCCCCCCCC PDPVGYVCALTDPDGNVIEISHGQRVFSTVRDLWGPRG CCCCCEEEEEECCCCCEEEECCCHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043; 1849605 [H]