Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316916

Identifier: 158316916

GI number: 158316916

Start: 6184875

End: 6185750

Strand: Reverse

Name: 158316916

Synonym: Franean1_5160

Alternate gene names: NA

Gene position: 6185750-6184875 (Counterclockwise)

Preceding gene: 158316917

Following gene: 158316915

Centisome position: 68.87

GC content: 71.58

Gene sequence:

>876_bases
ATGCCCAGGTACACGCCAAGGAGAGTTTCGCCCTACGTGCTGCTCGGCGTGGCATCCCTGGTCGCCATCGCTGTCGCGCT
GGCCGGGATGGCCTTCTGGCCCGGGTCGTCGGATCCACCCCGGCCGCCCCAGGCGGCATCCACGGCGGTGCCCCTGCGTG
ATCCCCATGCGCTGACCGGGCGGACGATCGTGCTCGACCCGGGCCACAACGGCGGGAACGGTGCCGCGGGATCGGCCATC
AACCGCCTCGTCGACGCCGGCGGGTTCCAGAAGGAATGCGACACCGCCGGTGCGGAGACCGACGCCGGATATCCGGAGCA
CGCATTCACCTTCGACGTGGCGACCCGGGCCGCGGGCCTGCTGCGCTCGCGCGGGGCGACGGTGATACTCACCCGCAATG
ACGACACGGGCGTCGGTCCCTGCGTCGACGAGCGGGCCCGGATCGGAAATGCGGCCGGCGCGGAGGCTGTGGTCTCCATT
CACGCCGACGGCGGGCCGTCCGAAGGCAGCGGATTTCACGTCATCGCGCCTGCGGCCAGTCCGGACGGTGGAAACGGGGG
CATTCTCACCGCCTCGGCGCGGCTGGCGGATCTGCTGCGAGGCACCTTCGGTGCGGCGACCGGCCAGCGTCGGGCGGACT
ATCTGGGAGATGACGGGATCACGGTCCGCTCGGATCTCGGCGGGCTCAATCTCTCCCGTGTTCCCAAGGTTTTCCTCGAG
TGCGGAAACATGCACAACCCGGGCGACGCCGGGCGGATCAGCGACGCTGCCTGGCGGCAGCGGGCGGCCGAGGGCATCGT
TGACGGCCTCGCGGCCTTCCTGGTCAGCGCCCCGTCCGGCGCCTCGACCGGCGTGGCCAGGCCGGCCACGGGCTAG

Upstream 100 bases:

>100_bases
TTCCGGTCTTCCGGCCCAGCCCTGCCGATCTCGCTCCAGTCAACGCCGGACGCTGGAGGAGGCCGTGTCCAGGAGGGGGC
GGACAGAATCGGGGGCTGAC

Downstream 100 bases:

>100_bases
CCGGCCCCGAGGGTCGGCGGGCTGGCCGGCTTCGGGCTGTCGCGGTGGGCGCGCCGATGGTCCGGGCTGTGCGCCTCGGC
CGTGTGTCGCAAGTGGACCA

Product: cell wall hydrolase/autolysin

Products: NA

Alternate protein names: N-Acetylmuramoyl-L-Alanine Amidase; N-Acetymuramyl-L-Alanine Amidase; Glutaminase; Hydrolase; N-Acetylmuramoyl-L-Alanine Amidase-Like Protein; N-Acetymuramyl-L-Alanine Amidase-Related Protein; Cell Wall Glycoprotein Hydrolase; Secreted Protein

Number of amino acids: Translated: 291; Mature: 290

Protein sequence:

>291_residues
MPRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTGRTIVLDPGHNGGNGAAGSAI
NRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGLLRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSI
HADGGPSEGSGFHVIAPAASPDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE
CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG

Sequences:

>Translated_291_residues
MPRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTGRTIVLDPGHNGGNGAAGSAI
NRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGLLRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSI
HADGGPSEGSGFHVIAPAASPDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE
CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG
>Mature_290_residues
PRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTGRTIVLDPGHNGGNGAAGSAIN
RLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGLLRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSIH
ADGGPSEGSGFHVIAPAASPDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLEC
GNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG

Specific function: Unknown

COG id: COG0860

COG function: function code M; N-acetylmuramoyl-L-alanine amidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29322; Mature: 29191

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTG
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RTIVLDPGHNGGNGAAGSAINRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGL
CEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHH
LRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSIHADGGPSEGSGFHVIAPAAS
HHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCC
PDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE
CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PRYTPRRVSPYVLLGVASLVAIAVALAGMAFWPGSSDPPRPPQAASTAVPLRDPHALTG
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
RTIVLDPGHNGGNGAAGSAINRLVDAGGFQKECDTAGAETDAGYPEHAFTFDVATRAAGL
CEEEECCCCCCCCCCHHHHHHHHHHCCCCHHHHHCCCCCCCCCCCCCEEEHHHHHHHHHH
LRSRGATVILTRNDDTGVGPCVDERARIGNAAGAEAVVSIHADGGPSEGSGFHVIAPAAS
HHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCCCCCEEEEECCCC
PDGGNGGILTASARLADLLRGTFGAATGQRRADYLGDDGITVRSDLGGLNLSRVPKVFLE
CCCCCCCEEEHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCEEECCCCCCCHHHHHHHHHH
CGNMHNPGDAGRISDAAWRQRAAEGIVDGLAAFLVSAPSGASTGVARPATG
HCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA