Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316914

Identifier: 158316914

GI number: 158316914

Start: 6182060

End: 6182491

Strand: Direct

Name: 158316914

Synonym: Franean1_5158

Alternate gene names: NA

Gene position: 6182060-6182491 (Clockwise)

Preceding gene: 158316913

Following gene: 158316918

Centisome position: 68.83

GC content: 68.98

Gene sequence:

>432_bases
ATGACTATTCGTCACGATTCGATCACCGCAGAACTCGCCCTTCGGCTCGTCGTTCCCGGCGGCGCCCCGGTTCCGGTCGC
CGCCACCGTCCGATACGAGCCTGCTGACCCTTATGCGGTCAGCATCGGCTTCCGTACCGGCGCCGACGAGGTCGTCGAAT
GGACATTCGCCCGGCAGCTGCTGAGCGACGGCGTGCGCCGGCCAGCCGGCGACGGCGATGTCCAGGTCTGGCCCGCCGCG
CAGTCGGGCGGGCGGATCGTCTGCCTGTCGTTGTCCAGTCCATCCGGTCACGCTCTGTTCGAGATGCCGCGCGCGGAGGT
GCTGGCCTTCCTCCGCCGCACGTACTCCGCTGTACCGCTCGGCGGGGAGAGCGACGTCATCGACCTGGATGCCGAACTCG
CCCTACTGATCTGGGGCGGCCCCGAGCGGTGA

Upstream 100 bases:

>100_bases
ATGTTGTCTTGGCATAACCTTGTTTCCAACGGGACTCAGAGAGGGAACTATCTCGTTACACGGGTGCTCGCCCGCACCAC
GCACCATGAGAGGCCGCCCG

Downstream 100 bases:

>100_bases
TCTCCCCGGGGTCGGCACCGTGTCCGACCCCGGCAAACCGGTGCGGGCACTTCCGGCACAGATCAGGCGCACGATCATTC
GCCTGGTGGGGAGCACTTCC

Product: sporulation and cell division protein SsgA

Products: NA

Alternate protein names: Regulator; Regulatory Protein; Protein Regulatory Protein; SsgA Protein; SsgG Protein; SsgA Family Transcriptional Regulator; SsgA-Like Regulator; SsgA-Like Sporulation/ Regulator; Sporulation And Regulator Protein

Number of amino acids: Translated: 143; Mature: 142

Protein sequence:

>143_residues
MTIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQLLSDGVRRPAGDGDVQVWPAA
QSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPLGGESDVIDLDAELALLIWGGPER

Sequences:

>Translated_143_residues
MTIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQLLSDGVRRPAGDGDVQVWPAA
QSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPLGGESDVIDLDAELALLIWGGPER
>Mature_142_residues
TIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQLLSDGVRRPAGDGDVQVWPAAQ
SGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPLGGESDVIDLDAELALLIWGGPER

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15238; Mature: 15107

Theoretical pI: Translated: 4.56; Mature: 4.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQL
CCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
LSDGVRRPAGDGDVQVWPAAQSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPL
HHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCC
GGESDVIDLDAELALLIWGGPER
CCCCCEEEECCEEEEEEECCCCC
>Mature Secondary Structure 
TIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQL
CCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH
LSDGVRRPAGDGDVQVWPAAQSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPL
HHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCC
GGESDVIDLDAELALLIWGGPER
CCCCCEEEECCEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA