| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316914
Identifier: 158316914
GI number: 158316914
Start: 6182060
End: 6182491
Strand: Direct
Name: 158316914
Synonym: Franean1_5158
Alternate gene names: NA
Gene position: 6182060-6182491 (Clockwise)
Preceding gene: 158316913
Following gene: 158316918
Centisome position: 68.83
GC content: 68.98
Gene sequence:
>432_bases ATGACTATTCGTCACGATTCGATCACCGCAGAACTCGCCCTTCGGCTCGTCGTTCCCGGCGGCGCCCCGGTTCCGGTCGC CGCCACCGTCCGATACGAGCCTGCTGACCCTTATGCGGTCAGCATCGGCTTCCGTACCGGCGCCGACGAGGTCGTCGAAT GGACATTCGCCCGGCAGCTGCTGAGCGACGGCGTGCGCCGGCCAGCCGGCGACGGCGATGTCCAGGTCTGGCCCGCCGCG CAGTCGGGCGGGCGGATCGTCTGCCTGTCGTTGTCCAGTCCATCCGGTCACGCTCTGTTCGAGATGCCGCGCGCGGAGGT GCTGGCCTTCCTCCGCCGCACGTACTCCGCTGTACCGCTCGGCGGGGAGAGCGACGTCATCGACCTGGATGCCGAACTCG CCCTACTGATCTGGGGCGGCCCCGAGCGGTGA
Upstream 100 bases:
>100_bases ATGTTGTCTTGGCATAACCTTGTTTCCAACGGGACTCAGAGAGGGAACTATCTCGTTACACGGGTGCTCGCCCGCACCAC GCACCATGAGAGGCCGCCCG
Downstream 100 bases:
>100_bases TCTCCCCGGGGTCGGCACCGTGTCCGACCCCGGCAAACCGGTGCGGGCACTTCCGGCACAGATCAGGCGCACGATCATTC GCCTGGTGGGGAGCACTTCC
Product: sporulation and cell division protein SsgA
Products: NA
Alternate protein names: Regulator; Regulatory Protein; Protein Regulatory Protein; SsgA Protein; SsgG Protein; SsgA Family Transcriptional Regulator; SsgA-Like Regulator; SsgA-Like Sporulation/ Regulator; Sporulation And Regulator Protein
Number of amino acids: Translated: 143; Mature: 142
Protein sequence:
>143_residues MTIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQLLSDGVRRPAGDGDVQVWPAA QSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPLGGESDVIDLDAELALLIWGGPER
Sequences:
>Translated_143_residues MTIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQLLSDGVRRPAGDGDVQVWPAA QSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPLGGESDVIDLDAELALLIWGGPER >Mature_142_residues TIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQLLSDGVRRPAGDGDVQVWPAAQ SGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPLGGESDVIDLDAELALLIWGGPER
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15238; Mature: 15107
Theoretical pI: Translated: 4.56; Mature: 4.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQL CCCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH LSDGVRRPAGDGDVQVWPAAQSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPL HHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCC GGESDVIDLDAELALLIWGGPER CCCCCEEEECCEEEEEEECCCCC >Mature Secondary Structure TIRHDSITAELALRLVVPGGAPVPVAATVRYEPADPYAVSIGFRTGADEVVEWTFARQL CCCCCCEEEEEEEEEEECCCCCCCEEEEEEECCCCCEEEEEECCCCHHHHHHHHHHHHH LSDGVRRPAGDGDVQVWPAAQSGGRIVCLSLSSPSGHALFEMPRAEVLAFLRRTYSAVPL HHHHCCCCCCCCCEEEEECCCCCCEEEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCC GGESDVIDLDAELALLIWGGPER CCCCCEEEECCEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA