| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316907
Identifier: 158316907
GI number: 158316907
Start: 6172570
End: 6173169
Strand: Reverse
Name: 158316907
Synonym: Franean1_5151
Alternate gene names: NA
Gene position: 6173169-6172570 (Counterclockwise)
Preceding gene: 158316908
Following gene: 158316905
Centisome position: 68.73
GC content: 76.67
Gene sequence:
>600_bases GTGACCTGTCCACCGGGGTTGACTACGCTGCGCGAGATGACAGCCGTGGTGGTCGTGGTGGTGGCCGTAGTGGTGATCGC CACCTACCTGACCTGGCTGGCGAGTCGACTCGACCGGCTGGCCGGCCGGGTCGACGCGGCGCGCGCCGGCCTCGTGGTCC AGCTCATGGCCCGGGCCGACGCGGCGCACGAGCTCGCCCGCCGCCGTGACCTCGCCGAGCTCGCCGACATGGCCGAGCGT GCCCGGGCCGGCCATGTCGCCCTGCTCGCCGGCGCCGGTCTGGGCACCACCGCGGAGGACGCGGAGAACGCGCTGAGCCG GGCGCTGCGCGCCCCGGCCGTCGTCGCCGTGGGGCAGCGCGCCCCGGAGGAGGTACTCGCCGTCGACTCGGCGGCGGCCC GGGTGGCCCTGGCCCGCCAGTTCCACAACGACGCGGTCGGCGACGTCCGCTCGCTCGCCGGCCGGCGCCTGGTGCGGGTC CTGCACCTGTCAGGGCGCCGGCCGCTGCCTGCCTACTTCGAGATCGACGACGCGCTGCCCGCCCGGGAGGAGGACCCCCC GCCCCGTTCGGACGACCCGGCAGGGATCCCCGGAGCCTGA
Upstream 100 bases:
>100_bases CTGAGCCGGCCGGGCGGTATCCCGCGGCGGCCGGACTGCGGCGCCGGCCGGTATCCCGTGCCTGGCGATATCCCGCGCCG GCCGATATCACCGACCGGCC
Downstream 100 bases:
>100_bases GCGCTCGCGTTGCGCGTCGTCCCCTGCTGGTCCGGCACGGCGCTCTGGTCGGGCTGCCCCGCGCCCGCGCTGGGCACCGG CCCGAGACACAGGACGAAGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 199; Mature: 198
Protein sequence:
>199_residues MTCPPGLTTLREMTAVVVVVVAVVVIATYLTWLASRLDRLAGRVDAARAGLVVQLMARADAAHELARRRDLAELADMAER ARAGHVALLAGAGLGTTAEDAENALSRALRAPAVVAVGQRAPEEVLAVDSAAARVALARQFHNDAVGDVRSLAGRRLVRV LHLSGRRPLPAYFEIDDALPAREEDPPPRSDDPAGIPGA
Sequences:
>Translated_199_residues MTCPPGLTTLREMTAVVVVVVAVVVIATYLTWLASRLDRLAGRVDAARAGLVVQLMARADAAHELARRRDLAELADMAER ARAGHVALLAGAGLGTTAEDAENALSRALRAPAVVAVGQRAPEEVLAVDSAAARVALARQFHNDAVGDVRSLAGRRLVRV LHLSGRRPLPAYFEIDDALPAREEDPPPRSDDPAGIPGA >Mature_198_residues TCPPGLTTLREMTAVVVVVVAVVVIATYLTWLASRLDRLAGRVDAARAGLVVQLMARADAAHELARRRDLAELADMAERA RAGHVALLAGAGLGTTAEDAENALSRALRAPAVVAVGQRAPEEVLAVDSAAARVALARQFHNDAVGDVRSLAGRRLVRVL HLSGRRPLPAYFEIDDALPAREEDPPPRSDDPAGIPGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20953; Mature: 20822
Theoretical pI: Translated: 6.96; Mature: 6.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPPGLTTLREMTAVVVVVVAVVVIATYLTWLASRLDRLAGRVDAARAGLVVQLMARAD CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHELARRRDLAELADMAERARAGHVALLAGAGLGTTAEDAENALSRALRAPAVVAVGQR HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCCC APEEVLAVDSAAARVALARQFHNDAVGDVRSLAGRRLVRVLHLSGRRPLPAYFEIDDALP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC AREEDPPPRSDDPAGIPGA CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure TCPPGLTTLREMTAVVVVVVAVVVIATYLTWLASRLDRLAGRVDAARAGLVVQLMARAD CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AAHELARRRDLAELADMAERARAGHVALLAGAGLGTTAEDAENALSRALRAPAVVAVGQR HHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHHHCCHHHHHCCC APEEVLAVDSAAARVALARQFHNDAVGDVRSLAGRRLVRVLHLSGRRPLPAYFEIDDALP CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCC AREEDPPPRSDDPAGIPGA CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA