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The map label for this gene is crtI [H]

Identifier: 158316884

GI number: 158316884

Start: 6142910

End: 6144430

Strand: Direct

Name: crtI [H]

Synonym: Franean1_5128

Alternate gene names: 158316884

Gene position: 6142910-6144430 (Clockwise)

Preceding gene: 158316880

Following gene: 158316885

Centisome position: 68.39

GC content: 74.69

Gene sequence:

>1521_bases
ATGCGAACAGTGACCGGGCCGACGGACCACGTCGTCATCGTCGGAGCCGGGCTGGGCGGACTTTCGGCCGCGCTCCGGCT
GACCGGCGCGGGCCGGCGGGTCACCGTCCTGGAACGTGACGACACCCCCGGTGGGCGCGCGGGGTCGCTGCGGCTGGGCG
GCTACCGGTTCGACACCGGGCCGACCGTGCTCACCATGCCGGACCTGGTGGCGGACGCGCTCGACTGCGTGGGCGAGGAC
CTCGGCCGGTGGCTGCCACTGCGCCGCCTCGACCCGATGTACCGGGCCCGCTTCGCGGACGGGTCCGTGCTGGACGTCCG
CGCCGACCCGGAGCACACCGAGCAGGGGGTGCGGGAGCTGTGCGGGCCGGCCGAGGCGGCCGGATTCCGTGACTTCACCC
GGTTCGCGACCCGCATGTTCCAGGCGCAGATGCGCGACTTCATCGACGCCCAGGTCGACTCGCCGCTGGCGCTGATGCGG
CCCTCGCTGGCCCGGGTGGCGGCGCTCGGCGGGTTCCGCCGCCTGGACACCGTGGTCGGACGGTACCTTCGCGACCCGCG
GACCCGGCGGCTGTTCTCCTTCCAGGCGATGTACGCCGGGCTCGACCCGCACGAGGCGCTCGGGCTGTACGCCGTGATTG
CCTACATGGACTCGGTGGCCGGCGTCTTCCACGCCGACGGCGGCCCGCACGCGGTCGCCGCGGCCATGGCCGGGGCGGCG
GCCCGGCACGGGGCCACCTTCCGCTATGGCACCGAGGTGAACCGGGTGGAGGTCCGCGGCGGGCGGGCGGTCGCCGTGCA
CACGACCGCCGGCGAGCGGGTGCCGGCGGACGTCGTGATCCTCAACCCGGACCTCCCGGTGGCCTACCGTGACCTGCTGC
CCGCCTCCGCCACCCCGGCGCGGCTGGACCGCCTGCGGCACTCGCCGTCCTGCTTCCTGCTGCTCGCCGGTGCCCGGGGC
GCCCACCCGTCCGGCGCGCACCACACGATCCACTTCGGCGGCGCGTGGCGGCGCACCTTCGACGAGATCATTCGACGCGG
GGAGCTGATGAGCGACCCGTCGTTCCTGGTGAGCACGCCGTCGGTCACCGAGCCGGCGGCCGCGCCGGCGGGCGGGCACA
GCTACTACGTCCTGTTCCCCACCCCGAACCTGACCGCGCCGCTGGACTGGTCGGTCCTCGGCCTGCGGTACCGCGACGAG
GTCGTCGCCACGCTGGAGCGTGCCGGCTACCCCGGGTTCGGGACGTCGATCGACGTCGAGCAGGTGACCACCCCGGCGGA
CTGGCGGGCCCGTGGGATGGCCGCCGGCGCGCCGTTCGCGGCGGCGCACACCTTCCGCCAGACCGGCCCGTTCCGGCCGT
CCAACCTGGCGCCGGGACTGGCCAACGTGGTGTTCGTCGGCAGCGGAACCCGGCCGGGGGTGGGAGTTCCGATGGTGCTG
ATATCGGGCCGGCTGGCCGCCGAGCGGGTTCTCGGCCGTGATCGTGGCTACCGCACGCGGACACTGAGGGCTATTCCCTG
A

Upstream 100 bases:

>100_bases
GGGGCCATCGGCGGCGGGCGGAGCGGAGGCCCGCTCGGGCCCGGTGAGACCGTACCCACCCGAGCGGTGGACGGCCGGGC
GGGTGCAGAGAGGACCTCCG

Downstream 100 bases:

>100_bases
CGCCGCAATGTGTCATTGAGCGTTCGGGGCGTCACCCGGGTTTCGTGTCCCCGGAGTTTCGGCGCGGTATTAGGTGAGAA
CTTCCTGAAGGGCACCTTAG

Product: zeta-phytoene desaturase

Products: NA

Alternate protein names: Phytoene desaturase [H]

Number of amino acids: Translated: 506; Mature: 506

Protein sequence:

>506_residues
MRTVTGPTDHVVIVGAGLGGLSAALRLTGAGRRVTVLERDDTPGGRAGSLRLGGYRFDTGPTVLTMPDLVADALDCVGED
LGRWLPLRRLDPMYRARFADGSVLDVRADPEHTEQGVRELCGPAEAAGFRDFTRFATRMFQAQMRDFIDAQVDSPLALMR
PSLARVAALGGFRRLDTVVGRYLRDPRTRRLFSFQAMYAGLDPHEALGLYAVIAYMDSVAGVFHADGGPHAVAAAMAGAA
ARHGATFRYGTEVNRVEVRGGRAVAVHTTAGERVPADVVILNPDLPVAYRDLLPASATPARLDRLRHSPSCFLLLAGARG
AHPSGAHHTIHFGGAWRRTFDEIIRRGELMSDPSFLVSTPSVTEPAAAPAGGHSYYVLFPTPNLTAPLDWSVLGLRYRDE
VVATLERAGYPGFGTSIDVEQVTTPADWRARGMAAGAPFAAAHTFRQTGPFRPSNLAPGLANVVFVGSGTRPGVGVPMVL
ISGRLAAERVLGRDRGYRTRTLRAIP

Sequences:

>Translated_506_residues
MRTVTGPTDHVVIVGAGLGGLSAALRLTGAGRRVTVLERDDTPGGRAGSLRLGGYRFDTGPTVLTMPDLVADALDCVGED
LGRWLPLRRLDPMYRARFADGSVLDVRADPEHTEQGVRELCGPAEAAGFRDFTRFATRMFQAQMRDFIDAQVDSPLALMR
PSLARVAALGGFRRLDTVVGRYLRDPRTRRLFSFQAMYAGLDPHEALGLYAVIAYMDSVAGVFHADGGPHAVAAAMAGAA
ARHGATFRYGTEVNRVEVRGGRAVAVHTTAGERVPADVVILNPDLPVAYRDLLPASATPARLDRLRHSPSCFLLLAGARG
AHPSGAHHTIHFGGAWRRTFDEIIRRGELMSDPSFLVSTPSVTEPAAAPAGGHSYYVLFPTPNLTAPLDWSVLGLRYRDE
VVATLERAGYPGFGTSIDVEQVTTPADWRARGMAAGAPFAAAHTFRQTGPFRPSNLAPGLANVVFVGSGTRPGVGVPMVL
ISGRLAAERVLGRDRGYRTRTLRAIP
>Mature_506_residues
MRTVTGPTDHVVIVGAGLGGLSAALRLTGAGRRVTVLERDDTPGGRAGSLRLGGYRFDTGPTVLTMPDLVADALDCVGED
LGRWLPLRRLDPMYRARFADGSVLDVRADPEHTEQGVRELCGPAEAAGFRDFTRFATRMFQAQMRDFIDAQVDSPLALMR
PSLARVAALGGFRRLDTVVGRYLRDPRTRRLFSFQAMYAGLDPHEALGLYAVIAYMDSVAGVFHADGGPHAVAAAMAGAA
ARHGATFRYGTEVNRVEVRGGRAVAVHTTAGERVPADVVILNPDLPVAYRDLLPASATPARLDRLRHSPSCFLLLAGARG
AHPSGAHHTIHFGGAWRRTFDEIIRRGELMSDPSFLVSTPSVTEPAAAPAGGHSYYVLFPTPNLTAPLDWSVLGLRYRDE
VVATLERAGYPGFGTSIDVEQVTTPADWRARGMAAGAPFAAAHTFRQTGPFRPSNLAPGLANVVFVGSGTRPGVGVPMVL
ISGRLAAERVLGRDRGYRTRTLRAIP

Specific function: This enzyme converts phytoene into zeta-carotene via the intermediary of phytofluene by the symmetrical introduction of two double bonds at the C-11 and C-11' positions of phytoene [H]

COG id: COG1233

COG function: function code Q; Phytoene dehydrogenase and related proteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carotenoid/retinoid oxidoreductase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002937
- InterPro:   IPR008150
- InterPro:   IPR014105 [H]

Pfam domain/function: PF01593 Amino_oxidase [H]

EC number: NA

Molecular weight: Translated: 54231; Mature: 54231

Theoretical pI: Translated: 9.90; Mature: 9.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTVTGPTDHVVIVGAGLGGLSAALRLTGAGRRVTVLERDDTPGGRAGSLRLGGYRFDTG
CCCCCCCCCEEEEEECCCCHHHHHHEEECCCCEEEEEECCCCCCCCCCEEEECCEEECCC
PTVLTMPDLVADALDCVGEDLGRWLPLRRLDPMYRARFADGSVLDVRADPEHTEQGVREL
CEEEECHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCEEEEECCCHHHHHHHHHH
CGPAEAAGFRDFTRFATRMFQAQMRDFIDAQVDSPLALMRPSLARVAALGGFRRLDTVVG
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHCCHHHHHHHHH
RYLRDPRTRRLFSFQAMYAGLDPHEALGLYAVIAYMDSVAGVFHADGGPHAVAAAMAGAA
HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
ARHGATFRYGTEVNRVEVRGGRAVAVHTTAGERVPADVVILNPDLPVAYRDLLPASATPA
HHCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHCCCCCCHH
RLDRLRHSPSCFLLLAGARGAHPSGAHHTIHFGGAWRRTFDEIIRRGELMSDPSFLVSTP
HHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEECC
SVTEPAAAPAGGHSYYVLFPTPNLTAPLDWSVLGLRYRDEVVATLERAGYPGFGTSIDVE
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCEEEHH
QVTTPADWRARGMAAGAPFAAAHTFRQTGPFRPSNLAPGLANVVFVGSGTRPGVGVPMVL
HCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE
ISGRLAAERVLGRDRGYRTRTLRAIP
ECCCHHHHHHHHCCCCCCCCEEECCC
>Mature Secondary Structure
MRTVTGPTDHVVIVGAGLGGLSAALRLTGAGRRVTVLERDDTPGGRAGSLRLGGYRFDTG
CCCCCCCCCEEEEEECCCCHHHHHHEEECCCCEEEEEECCCCCCCCCCEEEECCEEECCC
PTVLTMPDLVADALDCVGEDLGRWLPLRRLDPMYRARFADGSVLDVRADPEHTEQGVREL
CEEEECHHHHHHHHHHHHHHHHHCCCHHHCCHHHHHHCCCCCEEEEECCCHHHHHHHHHH
CGPAEAAGFRDFTRFATRMFQAQMRDFIDAQVDSPLALMRPSLARVAALGGFRRLDTVVG
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHHHHHHHHCCHHHHHHHHH
RYLRDPRTRRLFSFQAMYAGLDPHEALGLYAVIAYMDSVAGVFHADGGPHAVAAAMAGAA
HHHCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHHHHHHH
ARHGATFRYGTEVNRVEVRGGRAVAVHTTAGERVPADVVILNPDLPVAYRDLLPASATPA
HHCCCEEEECCCCCEEEECCCEEEEEEECCCCCCCCCEEEECCCCCCHHHHHCCCCCCHH
RLDRLRHSPSCFLLLAGARGAHPSGAHHTIHFGGAWRRTFDEIIRRGELMSDPSFLVSTP
HHHHHCCCCCEEEEEECCCCCCCCCCCEEEEECCHHHHHHHHHHHCCCCCCCCCEEEECC
SVTEPAAAPAGGHSYYVLFPTPNLTAPLDWSVLGLRYRDEVVATLERAGYPGFGTSIDVE
CCCCCCCCCCCCCEEEEEECCCCCCCCCCCEEEEEEHHHHHHHHHHHCCCCCCCCEEEHH
QVTTPADWRARGMAAGAPFAAAHTFRQTGPFRPSNLAPGLANVVFVGSGTRPGVGVPMVL
HCCCCCCHHHCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEEECCCCCCCCCCEEE
ISGRLAAERVLGRDRGYRTRTLRAIP
ECCCHHHHHHHHCCCCCCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8917308 [H]