| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is 158316870
Identifier: 158316870
GI number: 158316870
Start: 6124144
End: 6124281
Strand: Reverse
Name: 158316870
Synonym: Franean1_5113
Alternate gene names: NA
Gene position: 6124281-6124144 (Counterclockwise)
Preceding gene: 158316871
Following gene: 158316869
Centisome position: 68.18
GC content: 71.01
Gene sequence:
>138_bases GTGGCACTGATCGTGCGCGGCCGGCTGGAGAGCGCGGAAGGCGTGGTGGACATGATCGTCGAGAGCCTGCTGCTGCTGCT GCTGCTGCCGCTGCCGCTGCCGCTGGCGGTGGGCGGGCGCTCCAGGGACTTCCGATGA
Upstream 100 bases:
>100_bases CCGTGGGCATGACCCCGTGCGAGCGGGTCAGACCGGGGGTGCCTCACCGAGAGGCGAGGCGGCATGACCGGGCGCTACCA GGCGCTCACATGCAACGGCG
Downstream 100 bases:
>100_bases CGCCCCACTGATGACGGCCCACTCTTGCGTCGAGACCCACGTTCGGTCACCATCGGTTACAGCTTGGGGTTTGATGATTA CTGAGGGTGGTGGTTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 45; Mature: 44
Protein sequence:
>45_residues MALIVRGRLESAEGVVDMIVESLLLLLLLPLPLPLAVGGRSRDFR
Sequences:
>Translated_45_residues MALIVRGRLESAEGVVDMIVESLLLLLLLPLPLPLAVGGRSRDFR >Mature_44_residues ALIVRGRLESAEGVVDMIVESLLLLLLLPLPLPLAVGGRSRDFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 4900; Mature: 4769
Theoretical pI: Translated: 6.73; Mature: 6.73
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.4 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALIVRGRLESAEGVVDMIVESLLLLLLLPLPLPLAVGGRSRDFR CEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC >Mature Secondary Structure ALIVRGRLESAEGVVDMIVESLLLLLLLPLPLPLAVGGRSRDFR EEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA