Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316827

Identifier: 158316827

GI number: 158316827

Start: 6068838

End: 6069533

Strand: Reverse

Name: 158316827

Synonym: Franean1_5069

Alternate gene names: NA

Gene position: 6069533-6068838 (Counterclockwise)

Preceding gene: 158316828

Following gene: 158316826

Centisome position: 67.57

GC content: 74.43

Gene sequence:

>696_bases
GTGCACGTGCCGGTGTCGGGGCGAGCACCACGGCGCCCTGCTCGACGCCGCGGTGTCCGCCGAGGCCGAGAGGAACGCCG
CATGAAGGACACCGTGAGCTACGACCTCACCCCGACCTCGACGGCGGCCGTGGTGCAGCAGCACGCCGCCGCCACGATCC
GCCGGCATGTGCCGGACCTCGACGGCCGGCTCGAGGTCCTGGCCGCGCTCGGCCTGCCGCCAGGGCTGGCGGAGGACCCG
CCGGTGCCGGGGGTGGCCGACGGGTACCGGGCGCTGGCCGGCGCGGTGCTCGAGCTTATCCGCGACGGGGCGATCAGTGC
CCAGTCGTTCTCCGGCCGGATCATCCGGTCGGACCCGCCGCCCCCGTCGGGCGGGTACCGCCGCTCCGGCGGGAAGCTGC
CGACCGTCCGCCGGCTGGAGATCGACCTACGCGAGTACGGGCCCGCCGTGTTCGCCGCCTATGAAGGAGCCGCCATCATG
AACGTTCGCTCGACGAGCACCGGGTCTCCCCGGAGTGACCTGTCCGCCAGGGCGCGTGACGCCCGCCGGCGGATCGCGGT
GTCGCAGATCCTCGGCACGCCGGAGATGCGGGCGACCGCCGCGCACCGGAACCGGGCCAAGTTCGCGCTGCTGCGGATCG
ACCGGCCGGAACTGTTCAACCCCGCGCTCCGGACCAGCTCCGGGGTGGGGGTTTGA

Upstream 100 bases:

>100_bases
CCACGACCATCCTGATCGTCACCCCGACGACCGCCCGGACCCTGCTCGACACCGGTCTGTGCACCGTCGGGTGCCTGCTC
GCCGGGAGCGGGCCGCGCGG

Downstream 100 bases:

>100_bases
CCAGCCCGCCCTGGGGTAAAAAGTCAAGTCGGGGTGCCGCCGGGCCCTTCCGGAGTGGCGACTGTGTGGCCGACGGTGCC
CCGCCTCGACCGCCGGCCCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 231; Mature: 231

Protein sequence:

>231_residues
MHVPVSGRAPRRPARRRGVRRGREERRMKDTVSYDLTPTSTAAVVQQHAAATIRRHVPDLDGRLEVLAALGLPPGLAEDP
PVPGVADGYRALAGAVLELIRDGAISAQSFSGRIIRSDPPPPSGGYRRSGGKLPTVRRLEIDLREYGPAVFAAYEGAAIM
NVRSTSTGSPRSDLSARARDARRRIAVSQILGTPEMRATAAHRNRAKFALLRIDRPELFNPALRTSSGVGV

Sequences:

>Translated_231_residues
MHVPVSGRAPRRPARRRGVRRGREERRMKDTVSYDLTPTSTAAVVQQHAAATIRRHVPDLDGRLEVLAALGLPPGLAEDP
PVPGVADGYRALAGAVLELIRDGAISAQSFSGRIIRSDPPPPSGGYRRSGGKLPTVRRLEIDLREYGPAVFAAYEGAAIM
NVRSTSTGSPRSDLSARARDARRRIAVSQILGTPEMRATAAHRNRAKFALLRIDRPELFNPALRTSSGVGV
>Mature_231_residues
MHVPVSGRAPRRPARRRGVRRGREERRMKDTVSYDLTPTSTAAVVQQHAAATIRRHVPDLDGRLEVLAALGLPPGLAEDP
PVPGVADGYRALAGAVLELIRDGAISAQSFSGRIIRSDPPPPSGGYRRSGGKLPTVRRLEIDLREYGPAVFAAYEGAAIM
NVRSTSTGSPRSDLSARARDARRRIAVSQILGTPEMRATAAHRNRAKFALLRIDRPELFNPALRTSSGVGV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24934; Mature: 24934

Theoretical pI: Translated: 11.97; Mature: 11.97

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHVPVSGRAPRRPARRRGVRRGREERRMKDTVSYDLTPTSTAAVVQQHAAATIRRHVPDL
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
DGRLEVLAALGLPPGLAEDPPVPGVADGYRALAGAVLELIRDGAISAQSFSGRIIRSDPP
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
PPSGGYRRSGGKLPTVRRLEIDLREYGPAVFAAYEGAAIMNVRSTSTGSPRSDLSARARD
CCCCCCCCCCCCCCCEEEEEEEHHHHCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHH
ARRRIAVSQILGTPEMRATAAHRNRAKFALLRIDRPELFNPALRTSSGVGV
HHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHHCHHHHCCCCCCC
>Mature Secondary Structure
MHVPVSGRAPRRPARRRGVRRGREERRMKDTVSYDLTPTSTAAVVQQHAAATIRRHVPDL
CCCCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCC
DGRLEVLAALGLPPGLAEDPPVPGVADGYRALAGAVLELIRDGAISAQSFSGRIIRSDPP
CCHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCCC
PPSGGYRRSGGKLPTVRRLEIDLREYGPAVFAAYEGAAIMNVRSTSTGSPRSDLSARARD
CCCCCCCCCCCCCCCEEEEEEEHHHHCCEEEEEECCEEEEEEECCCCCCCHHHHHHHHHH
ARRRIAVSQILGTPEMRATAAHRNRAKFALLRIDRPELFNPALRTSSGVGV
HHHHHHHHHHHCCCHHHHHHHHCCCCEEEEEEECCCHHHCHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA