Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316793

Identifier: 158316793

GI number: 158316793

Start: 6033731

End: 6036532

Strand: Reverse

Name: 158316793

Synonym: Franean1_5035

Alternate gene names: NA

Gene position: 6036532-6033731 (Counterclockwise)

Preceding gene: 158316797

Following gene: 158316788

Centisome position: 67.21

GC content: 71.88

Gene sequence:

>2802_bases
GTGTCGGCGCGCCTCGTCGCTGTTGCACCGCCGCTGCTCGCGCGCTGGCGGGAGGCCCGGCAGCGCCGGCTGTGGGCGGC
GGCGGACCATCCAGCCCCCCCGGGGGCCACCACGCCACTGGTGATCGATCCCGACCTGCTGGTCGCGGCCGACCTGCGTA
ACCGGGTGGCCGGTGATCCGGCGTTCGACCTGTGGACCGCCCGCCGGCAGTGGGTCGACGCCACCTTCGCAGCCGTCCGC
GCCAGCCGGGCGGCACTCGGCGGGGCTGCCCCGGCCGACGTATTCGACAGGGTCGTCGCCGACGTCGTGGGCGCACCCCT
CAGCGAGCTGACGGAGCTCGACCAGCGGCGTCGGCGCGCGAGCTCGATTGATGCCGAACTGGACGCGCTCCATCTGCTCC
CGGCGGAGCTGGCGCGGCTGGTGCGGCTGCGTGAGATGGCCGCCACCGGCATCGTCACCGACGACGAGTGGCGGGAACTC
GACCACCTGCTCACGCAGGTGCGTAAGCGCCAGCGGAGGGCGGACTGGCTCGCAGCAGAGGCCGCGATCGCGCTGACGCC
GGAGCACTTCGTGCTGTCGACCGGGCCGTGGTCGCCGGTTGCGTGGCGCGCCAGCGCCGTCGAGCGGGCGGATTGGCTGG
ACCGCCTGCAGGCGCGGATGGACCAGGAGAGCGCGGTCCGCGAAGCCCTGCGGACGGCGGTCAGCGAGGTCGAGCAGGCG
GCGCTGCCCCGGTGCCGGGACGGCCTGATCTCGCTGCTCGGCACGACCGGACCGGCCGAGGAGGCTGACCGGCTGACCGA
ACTGCTGCTGGTCGACTTCAGCGGCGGCGGCACGGAACTGACGACCCGTGTGGACCAGGCAATCGAGACGGTGCAGTTGC
TGTTCCTCGGCCTGCGGTCCGGCCGACTGCCGTCGGCGCACCCGGCGCTGGCCTGGACCATCGAGCCGGGCGGCGCGGCC
AGTCTCGACGAGGAATGGGCGTGGATGGGGGGCTACGACTCCTGGCGCGCGGCCCTGTTCCTGTTCACCTATCCCCAGGA
CCTGCTCGCCCCCTCGGTCCGCGACACCAGCGCCGCGGTCCCCGAGACGGCCCGCCCCACGCCCCCCTTCCGAACGCTGG
TCACCGCGCTGCGCGGCCAGCAGCGGCCACGTCGCGACATCGTGCTGACCGCGGCAAACGAGTTCCTGGCGACGATCCGG
CCGACGCTGGTGAACTTCCCGATCCGGCCCCTGCCCTACACCGCCGGCGACGAGGGCCTGCGCGACGGCCTGCTGGCGTT
CGGGTACACCGACCGTCCGACCGCGGCTGACCTGGCCCGCATCCGCGACCTGTCCGCGCGTGTGCTGATCACCCTTGCGG
TCGGACACCCGGGACTTCCGAACTACCTGCAGGAGCTCTTCTACTATGTGCCGCTGCTGGTGGCGCAGAACCTGCAACGT
GGCGGCGACTACGTGGCCGCGCTCGACTGGTACCGCACGATCTACGCCTTCGACCAGACTGACCTGCCCGACTTCTTCGT
ACCCTCGGACGAACGCAAGATCTACTACGGGCTTCAGCAGGAAGGGAACGCGCCGGACGCCCTGTCGCGTGGCATCCACT
GGCTGCGCGACGAGGTCAATCCGCACGCCCTGGCCGGTCAGTGGTCCAATCCCTACACGCGGTACACCTTCACCTCGATC
GCGCGCTGCTTCCTGGAATACGGGGACTTCGAGTTCACCCGGGACACCGGCGAGTCCCGGGCCAGGGCCCGGTCGTTGTA
CCTGACGGCGCGGTCGCTGCTGCGCGCGCCGGAGCTGGCGAACCTCGCGGGCCCGGGCCTGGGCGTGGCGGTCCCGAGCC
CCGTGCTGACCGCGTTACTCACCCGGGTTGACAACCAGCTCCGCAAGCTTCGGCAGGGCCGTAACATCGCCGGCCTGCGC
CGTCCGGTCGAGCCTCCGGACGCGGCCGCGTCGACGTCGGCCGGCATGCCCTATATCGGCGCTGGCGGTCAGCTGGTCAT
CCCCGCGCTGAACCCACCGCGACCCACGCCGTACCACTTCACGGTGTTGCTGGAGCGAGCCCGGCAGCTTGCCGCCACCG
CCGCCCAGGTGGAGGCGTCCTACCTGAGCGCGCTGGAGAAGCGCGACGCCGAGGCCTACGGCCGGTTGACCGCCGGCCTG
GATCTGGACGTCGCTCGGGCCGGCGAGGCCCTCCAGTCGTTGCGGGTCAGCGAGGCCCAGAAGGGCACCGAGCTTGCCCG
CCGGCAGAAGGCCGCCAGCGACGTACGCGCGACCACGTTCCAGCAGTGGATCGACGACGGCCCGAACGAATGGGAGCGCA
GCCTCGTCCGGGACTACGACGAGGCCCGGGTCTACCGTGACTGGATGGTGGGACTGGACGCGGCCATCACGGCGGCGCAG
GCTGTCGCCTCCGTCTCCTCCATCCCGGGTGCGGCCGCCGCGTCGACGGTTGGCGGGCTTGCCGTGGGCCGGGCCGTGAA
CGCGACGAGCCTCAACCGCACCGAGCAGGACATCGCGCTGAACACGCTGCGCGCCAGCCAGGAACGCCGCCAGGACGAGT
GGGAGCTCCAGCTCGCGACGGCCACCCAGGACGGCCTGGTCGCGCAGGAGGCGATCCTGCTCGCGCTCGACCACGAGGCC
ATCGTCGGACAGGAGGCCCGGATCGCCGGCCTCCAGGCGTTCGAGGCCCAGTCGGTGACCGACTTCCTGACCCGCAAGTT
CACCAGTGCCGAGCTCTACGAATGGATGAGCGGCGTCCTGGGGAACACTTCCTCCAGCAGGCCACCGGCACGGCGCTGCT
AG

Upstream 100 bases:

>100_bases
CCCGGAGGAGCGCCTTTCGTTTGTGGCGTGACCAGGGATTGGCGACCGCCGCCGGAGCCTGTGGAACCGCGCCTTGTGTC
CCGCGCCCCGGCGAGGCATC

Downstream 100 bases:

>100_bases
CCCAGAGCCAGCTTTCCTTCGAGCGCCAGCAGGCGTCCCCCAACTACGTCCAGAACGACTACTGGACGCCGACCGAGGAC
ACCGCGACCGTGCCGCGGCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 933; Mature: 932

Protein sequence:

>933_residues
MSARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDPAFDLWTARRQWVDATFAAVR
ASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRASSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWREL
DHLLTQVRKRQRRADWLAAEAAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA
ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRSGRLPSAHPALAWTIEPGGAA
SLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAVPETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIR
PTLVNFPIRPLPYTAGDEGLRDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR
GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVNPHALAGQWSNPYTRYTFTSI
ARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELANLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLR
RPVEPPDAAASTSAGMPYIGAGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL
DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYDEARVYRDWMVGLDAAITAAQ
AVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIALNTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEA
IVGQEARIAGLQAFEAQSVTDFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC

Sequences:

>Translated_933_residues
MSARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDPAFDLWTARRQWVDATFAAVR
ASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRASSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWREL
DHLLTQVRKRQRRADWLAAEAAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA
ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRSGRLPSAHPALAWTIEPGGAA
SLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAVPETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIR
PTLVNFPIRPLPYTAGDEGLRDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR
GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVNPHALAGQWSNPYTRYTFTSI
ARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELANLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLR
RPVEPPDAAASTSAGMPYIGAGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL
DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYDEARVYRDWMVGLDAAITAAQ
AVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIALNTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEA
IVGQEARIAGLQAFEAQSVTDFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC
>Mature_932_residues
SARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDPAFDLWTARRQWVDATFAAVRA
SRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRASSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWRELD
HLLTQVRKRQRRADWLAAEAAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQAA
LPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRSGRLPSAHPALAWTIEPGGAAS
LDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAVPETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIRP
TLVNFPIRPLPYTAGDEGLRDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQRG
GDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVNPHALAGQWSNPYTRYTFTSIA
RCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELANLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLRR
PVEPPDAAASTSAGMPYIGAGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGLD
LDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYDEARVYRDWMVGLDAAITAAQA
VASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIALNTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEAI
VGQEARIAGLQAFEAQSVTDFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 102227; Mature: 102096

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDP
CCCCEEEECCHHHHHHHHHHHHHHECCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCC
AFDLWTARRQWVDATFAAVRASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWRELDHLLTQVRKRQRRADWLAAE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA
HEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRS
HCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
GRLPSAHPALAWTIEPGGAASLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAV
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEEECCHHHHCCCCCCCCCCC
PETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIRPTLVNFPIRPLPYTAGDEGL
CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
RDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR
HCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVN
CCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
PHALAGQWSNPYTRYTFTSIARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELA
CCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHH
NLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLRRPVEPPDAAASTSAGMPYIG
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
AGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
EARVYRDWMVGLDAAITAAQAVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHH
NTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEAIVGQEARIAGLQAFEAQSVT
HHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHEEECCHHHHCCCHHHHHHHHHHHHHHH
DFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC
>Mature Secondary Structure 
SARLVAVAPPLLARWREARQRRLWAAADHPAPPGATTPLVIDPDLLVAADLRNRVAGDP
CCCEEEECCHHHHHHHHHHHHHHECCCCCCCCCCCCCCEEECCCHHHHHHHHHHCCCCC
AFDLWTARRQWVDATFAAVRASRAALGGAAPADVFDRVVADVVGAPLSELTELDQRRRRA
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
SSIDAELDALHLLPAELARLVRLREMAATGIVTDDEWRELDHLLTQVRKRQRRADWLAAE
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
AAIALTPEHFVLSTGPWSPVAWRASAVERADWLDRLQARMDQESAVREALRTAVSEVEQA
HEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALPRCRDGLISLLGTTGPAEEADRLTELLLVDFSGGGTELTTRVDQAIETVQLLFLGLRS
HCCHHHHHHHHHHCCCCCHHHHHHHHHEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCC
GRLPSAHPALAWTIEPGGAASLDEEWAWMGGYDSWRAALFLFTYPQDLLAPSVRDTSAAV
CCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCHHHHHEEEEEECCHHHHCCCCCCCCCCC
PETARPTPPFRTLVTALRGQQRPRRDIVLTAANEFLATIRPTLVNFPIRPLPYTAGDEGL
CCCCCCCCHHHHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHH
RDGLLAFGYTDRPTAADLARIRDLSARVLITLAVGHPGLPNYLQELFYYVPLLVAQNLQR
HCCCEEECCCCCCCHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHC
GGDYVAALDWYRTIYAFDQTDLPDFFVPSDERKIYYGLQQEGNAPDALSRGIHWLRDEVN
CCCEEHHHHHHHHHHCCCCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHCCC
PHALAGQWSNPYTRYTFTSIARCFLEYGDFEFTRDTGESRARARSLYLTARSLLRAPELA
CCEECCCCCCCCCHHHHHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHCCCCHH
NLAGPGLGVAVPSPVLTALLTRVDNQLRKLRQGRNIAGLRRPVEPPDAAASTSAGMPYIG
HHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
AGGQLVIPALNPPRPTPYHFTVLLERARQLAATAAQVEASYLSALEKRDAEAYGRLTAGL
CCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
DLDVARAGEALQSLRVSEAQKGTELARRQKAASDVRATTFQQWIDDGPNEWERSLVRDYD
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH
EARVYRDWMVGLDAAITAAQAVASVSSIPGAAAASTVGGLAVGRAVNATSLNRTEQDIAL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCHHCCCCHHHHHH
NTLRASQERRQDEWELQLATATQDGLVAQEAILLALDHEAIVGQEARIAGLQAFEAQSVT
HHHHHHHHHCCCHHEEEEEECCCCCHHHHHHHHEEECCHHHHCCCHHHHHHHHHHHHHHH
DFLTRKFTSAELYEWMSGVLGNTSSSRPPARRC
HHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA