Click here to switch to the map view.

The map label for this gene is 158316762

Identifier: 158316762

GI number: 158316762

Start: 5996403

End: 5996753

Strand: Reverse

Name: 158316762

Synonym: Franean1_5000

Alternate gene names: NA

Gene position: 5996753-5996403 (Counterclockwise)

Preceding gene: 158316763

Following gene: 158316761

Centisome position: 66.76

GC content: 71.79

Gene sequence:

>351_bases
TTGACCCGTGAAGGTGCGATCACCGGCCTGCTCGCGCTCGTTGTCGGCGTCGTCGCCGGGCTCCTCGTCGCGCCGAAGCC
CCCGACCTGGCTGGACCCGTACCTGCCGGTGGCGGTGGTCGCCGCGGTGGACGCGGCGGTCGGGGGCCTGCGCGCGGCGC
TGGAGCGGGTCTTCTCCGACCGTGTCTTCGTCGTGTCCTTCCTGTCGAACGTGCTGCTGGCCGTGGCGCTCGTCGCGCTG
GGCGACGCGCTCGGCGTCGGCGGCGCGATGTCGACCGCGATGGTCGTCGTCCTCGGCATCAGGATCTTCACCAACGCGAG
CGCGGTCCGCCGATCGCTGCTGAAACTGTGA

Upstream 100 bases:

>100_bases
TGGGCGCGCCCCCGAACGCCGTGACCGTCGCCCGCCTGGACGACGTCACCGTGCCGGCGGCCCCCAGCCCGAGCCTCCGA
TATGCCCGAGGGAGCGGATC

Downstream 100 bases:

>100_bases
CCGGCGAGCTGCCGCCCCGCGCTCCTCGGCTCCACGTGCCGCCGCCCGGCGAGTCGCCTCCCGGTGAGCTGCCGCTCGGG
GAGCCGCCGGACACCACGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 116; Mature: 115

Protein sequence:

>116_residues
MTREGAITGLLALVVGVVAGLLVAPKPPTWLDPYLPVAVVAAVDAAVGGLRAALERVFSDRVFVVSFLSNVLLAVALVAL
GDALGVGGAMSTAMVVVLGIRIFTNASAVRRSLLKL

Sequences:

>Translated_116_residues
MTREGAITGLLALVVGVVAGLLVAPKPPTWLDPYLPVAVVAAVDAAVGGLRAALERVFSDRVFVVSFLSNVLLAVALVAL
GDALGVGGAMSTAMVVVLGIRIFTNASAVRRSLLKL
>Mature_115_residues
TREGAITGLLALVVGVVAGLLVAPKPPTWLDPYLPVAVVAAVDAAVGGLRAALERVFSDRVFVVSFLSNVLLAVALVALG
DALGVGGAMSTAMVVVLGIRIFTNASAVRRSLLKL

Specific function: Unknown

COG id: COG3856

COG function: function code S; Uncharacterized conserved protein (small basic protein)

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sbp family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009709 [H]

Pfam domain/function: PF06947 DUF1290 [H]

EC number: NA

Molecular weight: Translated: 11808; Mature: 11677

Theoretical pI: Translated: 10.82; Mature: 10.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTREGAITGLLALVVGVVAGLLVAPKPPTWLDPYLPVAVVAAVDAAVGGLRAALERVFSD
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RVFVVSFLSNVLLAVALVALGDALGVGGAMSTAMVVVLGIRIFTNASAVRRSLLKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC
>Mature Secondary Structure 
TREGAITGLLALVVGVVAGLLVAPKPPTWLDPYLPVAVVAAVDAAVGGLRAALERVFSD
CCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHC
RVFVVSFLSNVLLAVALVALGDALGVGGAMSTAMVVVLGIRIFTNASAVRRSLLKL
HHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]