| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316757
Identifier: 158316757
GI number: 158316757
Start: 5992627
End: 5993112
Strand: Reverse
Name: 158316757
Synonym: Franean1_4995
Alternate gene names: NA
Gene position: 5993112-5992627 (Counterclockwise)
Preceding gene: 158316758
Following gene: 158316756
Centisome position: 66.72
GC content: 67.9
Gene sequence:
>486_bases GTGCATCGGCTGGACATCGTCGGCGTGCGTGTCGAGCTTCCGTCGAAGCAGCCGATCGTCCTGCTCAAGGAGGTGGGCGG GGAGCGGTACCTGCCAATCTGGATCGGCGCGGTCGAGGCGACGGCGATCGCCTTCGCCCAGGAGGGCATCACCACGGCCC GGCCGATGACCCACGACCTGATGCGGGATGTGCTGCGGGCACTCCAGACGGAGCTGACCCAGGTCACCATCACCGACCTG CAGGACGGAGTCTTCTTCGCCACGCTGGTGTTCGGTAACGGCGTGGAGGTCTCCGCCCGTCCCTCGGACGCGATCGCCCT GGCCATGCGGATGGGCGCGCCCGTGTACGGGGTCGAGGCGGTCCTGGCCGAGGCCGGGATCACCGTCCCAGAGGAGCAGG AACAGGAGCAGGAGAGCGAGCTGGAGAAGTTCCGGGAGTTCCTGGACACCATCTCGCCGGAGGACTTCAACACGCCGGGC TCCTGA
Upstream 100 bases:
>100_bases GCTGACGCGGGGCGGTAGCGGGGATACTGTCTCCCCGTGGGGTTTTCTGGCTCCGGTCACAGCGTCCCGCCCTACCCCAC CTGCGCTAGGAGGTAGATCG
Downstream 100 bases:
>100_bases ACCAGGCTCGGAGGGCCGCGAGGCCCCGGTGCCGCGCCGGATGTGACCCGGGCGGGGTAGCTCGTCCGGTTGGGCGCACA CTTGTCCTGGTGCGGCCAGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MHRLDIVGVRVELPSKQPIVLLKEVGGERYLPIWIGAVEATAIAFAQEGITTARPMTHDLMRDVLRALQTELTQVTITDL QDGVFFATLVFGNGVEVSARPSDAIALAMRMGAPVYGVEAVLAEAGITVPEEQEQEQESELEKFREFLDTISPEDFNTPG S
Sequences:
>Translated_161_residues MHRLDIVGVRVELPSKQPIVLLKEVGGERYLPIWIGAVEATAIAFAQEGITTARPMTHDLMRDVLRALQTELTQVTITDL QDGVFFATLVFGNGVEVSARPSDAIALAMRMGAPVYGVEAVLAEAGITVPEEQEQEQESELEKFREFLDTISPEDFNTPG S >Mature_161_residues MHRLDIVGVRVELPSKQPIVLLKEVGGERYLPIWIGAVEATAIAFAQEGITTARPMTHDLMRDVLRALQTELTQVTITDL QDGVFFATLVFGNGVEVSARPSDAIALAMRMGAPVYGVEAVLAEAGITVPEEQEQEQESELEKFREFLDTISPEDFNTPG S
Specific function: Unknown
COG id: COG1259
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003729 [H]
Pfam domain/function: PF02577 DUF151 [H]
EC number: NA
Molecular weight: Translated: 17626; Mature: 17626
Theoretical pI: Translated: 4.12; Mature: 4.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHRLDIVGVRVELPSKQPIVLLKEVGGERYLPIWIGAVEATAIAFAQEGITTARPMTHDL CCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCHHHHH MRDVLRALQTELTQVTITDLQDGVFFATLVFGNGVEVSARPSDAIALAMRMGAPVYGVEA HHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHCCCHHHHHH VLAEAGITVPEEQEQEQESELEKFREFLDTISPEDFNTPGS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MHRLDIVGVRVELPSKQPIVLLKEVGGERYLPIWIGAVEATAIAFAQEGITTARPMTHDL CCCCEEEEEEEECCCCCCEEEEEECCCCEEEEEEEEHHHHHHHHHHHCCCCCCCCHHHHH MRDVLRALQTELTQVTITDLQDGVFFATLVFGNGVEVSARPSDAIALAMRMGAPVYGVEA HHHHHHHHHHHHHEEEEECCCCCCEEEEEEECCCEEEECCCCHHHHHHHHHCCCHHHHHH VLAEAGITVPEEQEQEQESELEKFREFLDTISPEDFNTPGS HHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]