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The map label for this gene is 158316756

Identifier: 158316756

GI number: 158316756

Start: 5991637

End: 5992263

Strand: Reverse

Name: 158316756

Synonym: Franean1_4994

Alternate gene names: NA

Gene position: 5992263-5991637 (Counterclockwise)

Preceding gene: 158316757

Following gene: 158316755

Centisome position: 66.71

GC content: 72.89

Gene sequence:

>627_bases
GTGAATGGTGGCACCTCGATCGGAGCAGCCGCGCGGGTGGCGCCGGACGAAGCCGATCCCGCCTGGGTGGATGCCGAGCG
GACGACCATGATCGAGCAGGGTCAGCTCTTCGGCGACGAGATCCCGCAGCCGCCCGGTGACGACGTCGGATACCGCGGGC
CGACGGCCTGCTCGGCGGCCGGCATCACCTACCGCCAGCTCGACTACTGGGCGCGCACGGGCCTGGTCGTGCCCAGCGTG
CGCGGGGCGAGCGGGTCCGGCAGCCAGCGCCTCTACTCATTCCGCGACGTGCTGGTCCTGCGGGTCGTCCGCAAGCTGCT
GGAAGCCGGGGTGTCGCTGCAGAACATCCGGGCCGCCGTCGACCATCTGCGGACCAGGGGAGTGGCGGACCTCGCCCACC
TGACCCTCATCAGCGACGGCTCGACCGTCTACGAGTGCACATCGGACGACGAGGTGATCGACCTGGTCCGGGGTGGTCAG
GGCGTCTTCGCGATCGCGGTCGGGCGGGCACTGGAGGACATGCGCGGCCAGCTCGCGGAGCTGCCCTGCGAGCGCCCCGG
CAACCCGGCGGCGACGCACCCCGGCGACGAGCTGGCCCACCGCCGGCGGCGGCGCAGCTCGGCCTGA

Upstream 100 bases:

>100_bases
CGCGGGCCCGGGCCGGTGGGCGTGTGGCGCGGCGCCGGTGTGGGTGGTGTCGTCAGCGGGCGGGCCGTGAGGCTCCCGGA
CTGTCCGGAGGATGGGACTG

Downstream 100 bases:

>100_bases
TCGGCACGCCCCGCGGGGAAAAACCGTTGGGGAACTGTCGGTGGCCTGGCGTACGGTCCCCGTGTGACGGATCATCCTGC
GGTCCTCGTCGAGGGCCTTC

Product: MerR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 208

Protein sequence:

>208_residues
MNGGTSIGAAARVAPDEADPAWVDAERTTMIEQGQLFGDEIPQPPGDDVGYRGPTACSAAGITYRQLDYWARTGLVVPSV
RGASGSGSQRLYSFRDVLVLRVVRKLLEAGVSLQNIRAAVDHLRTRGVADLAHLTLISDGSTVYECTSDDEVIDLVRGGQ
GVFAIAVGRALEDMRGQLAELPCERPGNPAATHPGDELAHRRRRRSSA

Sequences:

>Translated_208_residues
MNGGTSIGAAARVAPDEADPAWVDAERTTMIEQGQLFGDEIPQPPGDDVGYRGPTACSAAGITYRQLDYWARTGLVVPSV
RGASGSGSQRLYSFRDVLVLRVVRKLLEAGVSLQNIRAAVDHLRTRGVADLAHLTLISDGSTVYECTSDDEVIDLVRGGQ
GVFAIAVGRALEDMRGQLAELPCERPGNPAATHPGDELAHRRRRRSSA
>Mature_208_residues
MNGGTSIGAAARVAPDEADPAWVDAERTTMIEQGQLFGDEIPQPPGDDVGYRGPTACSAAGITYRQLDYWARTGLVVPSV
RGASGSGSQRLYSFRDVLVLRVVRKLLEAGVSLQNIRAAVDHLRTRGVADLAHLTLISDGSTVYECTSDDEVIDLVRGGQ
GVFAIAVGRALEDMRGQLAELPCERPGNPAATHPGDELAHRRRRRSSA

Specific function: Unknown

COG id: COG0789

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH merR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009061
- InterPro:   IPR000551 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 22221; Mature: 22221

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: PS50937 HTH_MERR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNGGTSIGAAARVAPDEADPAWVDAERTTMIEQGQLFGDEIPQPPGDDVGYRGPTACSAA
CCCCCCCCCCEECCCCCCCCCEECCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHC
GITYRQLDYWARTGLVVPSVRGASGSGSQRLYSFRDVLVLRVVRKLLEAGVSLQNIRAAV
CCHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DHLRTRGVADLAHLTLISDGSTVYECTSDDEVIDLVRGGQGVFAIAVGRALEDMRGQLAE
HHHHHCCHHHHHHEEEECCCCEEEEECCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
LPCERPGNPAATHPGDELAHRRRRRSSA
CCCCCCCCCCCCCCCHHHHHHHHHHCCC
>Mature Secondary Structure
MNGGTSIGAAARVAPDEADPAWVDAERTTMIEQGQLFGDEIPQPPGDDVGYRGPTACSAA
CCCCCCCCCCEECCCCCCCCCEECCHHHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHC
GITYRQLDYWARTGLVVPSVRGASGSGSQRLYSFRDVLVLRVVRKLLEAGVSLQNIRAAV
CCHHHHHHHHHHCCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHH
DHLRTRGVADLAHLTLISDGSTVYECTSDDEVIDLVRGGQGVFAIAVGRALEDMRGQLAE
HHHHHCCHHHHHHEEEECCCCEEEEECCCCHHHHHHHCCCCEEEHHHHHHHHHHHHHHHH
LPCERPGNPAATHPGDELAHRRRRRSSA
CCCCCCCCCCCCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]