| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is nhaA2 [H]
Identifier: 158316713
GI number: 158316713
Start: 5943463
End: 5944251
Strand: Reverse
Name: nhaA2 [H]
Synonym: Franean1_4951
Alternate gene names: 158316713
Gene position: 5944251-5943463 (Counterclockwise)
Preceding gene: 158316715
Following gene: 158316701
Centisome position: 66.18
GC content: 71.74
Gene sequence:
>789_bases GTGGAAGTTCCTGAAGGAATGGTAGCCGAAGGAGATGCGGGGGTTCGTGTGGATGCGTCTGCTTGGGCGGGTGGTGCGTT TCGCGAGAATTCGGTGAATGGCACGGGGTTCGATGGGGATCCGGGTGCGACCGGTGTCTGCGACGTGCCGTCGGGGCCGG GTGTCGGCCCACGGGCCGACGCCCGCAAGGCGCACGGGCGAGCTGGGAAGCAGAGCCGGTGCGCCTCGACCGATCCCGGG CGCCACTCCCGGGGCGAGCCGGGCGCGCCGGTGGTGATCGTCGAGTACGGCGACTTCGAGTGCCCCTACTGCGCCCGCGC GGCCGCCATCCTGCACGAGCTGGTCGACTCCTCTGACGGCCAGGTCCGGCAGGTGTTCCGGCACTTCCCGGTCTTCGACA TCCATCCCTACGCACTCACCGCCGCGCTGGCGGCCGAGGTCGCCGGGGCGCACGGCCGGTTCTGGGAGATGCACGACCTG CTGTTCGCGAACCAGGACAAGCTGGCCGACAAGTACCTCATGGCCTTCGCCCGGTCCCTGGGGATCGAGACCGACCTCGT CGTCGGCGACCCGGCCCAGCCCTACGGCGACGCCGTCGAGGCCGACTACGCCGGCGGCGCCGAGCTGCGGGTGCAGGGCA CCCCGACGATCTTCATTGACGGGGTGCGGTACCGCGGCCGGCTCGAGCTCGGGCCGTTGCGGACGGCCGTCGCCCGCACG GGTTCCGGCCGGTCAGCGGATGACCGGGATGACGGCCGGCGTCGGCGAGTGCCATGGGCGCGGCGGTAG
Upstream 100 bases:
>100_bases GGCAAGAATGCTGTGGTTCGAGAGAATTCTGTGGTTAACGGGAATGCTGTGATTCGTGAAGGAGTGCTGGATTCGTGAAG GGTTGCCAACTGGAGAAGGC
Downstream 100 bases:
>100_bases CGCCGGGATCGCCTCGTCGGAGCCCGGCGAGCACAACGACCAGCGTTCCCCGACATAGCGCAGCACGAACGTGCCCAGCA CCGCGGCGGCGAAGGAGCCG
Product: DSBA oxidoreductase
Products: NA
Alternate protein names: Sodium/proton antiporter nhaA 2 [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MEVPEGMVAEGDAGVRVDASAWAGGAFRENSVNGTGFDGDPGATGVCDVPSGPGVGPRADARKAHGRAGKQSRCASTDPG RHSRGEPGAPVVIVEYGDFECPYCARAAAILHELVDSSDGQVRQVFRHFPVFDIHPYALTAALAAEVAGAHGRFWEMHDL LFANQDKLADKYLMAFARSLGIETDLVVGDPAQPYGDAVEADYAGGAELRVQGTPTIFIDGVRYRGRLELGPLRTAVART GSGRSADDRDDGRRRRVPWARR
Sequences:
>Translated_262_residues MEVPEGMVAEGDAGVRVDASAWAGGAFRENSVNGTGFDGDPGATGVCDVPSGPGVGPRADARKAHGRAGKQSRCASTDPG RHSRGEPGAPVVIVEYGDFECPYCARAAAILHELVDSSDGQVRQVFRHFPVFDIHPYALTAALAAEVAGAHGRFWEMHDL LFANQDKLADKYLMAFARSLGIETDLVVGDPAQPYGDAVEADYAGGAELRVQGTPTIFIDGVRYRGRLELGPLRTAVART GSGRSADDRDDGRRRRVPWARR >Mature_262_residues MEVPEGMVAEGDAGVRVDASAWAGGAFRENSVNGTGFDGDPGATGVCDVPSGPGVGPRADARKAHGRAGKQSRCASTDPG RHSRGEPGAPVVIVEYGDFECPYCARAAAILHELVDSSDGQVRQVFRHFPVFDIHPYALTAALAAEVAGAHGRFWEMHDL LFANQDKLADKYLMAFARSLGIETDLVVGDPAQPYGDAVEADYAGGAELRVQGTPTIFIDGVRYRGRLELGPLRTAVART GSGRSADDRDDGRRRRVPWARR
Specific function: Na(+)/H(+) antiporter that extrudes sodium in exchange for external protons [H]
COG id: COG1651
COG function: function code O; Protein-disulfide isomerase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001853 - InterPro: IPR023171 - InterPro: IPR004670 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF01323 DSBA; PF06965 Na_H_antiport_1 [H]
EC number: NA
Molecular weight: Translated: 27918; Mature: 27918
Theoretical pI: Translated: 5.91; Mature: 5.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEVPEGMVAEGDAGVRVDASAWAGGAFRENSVNGTGFDGDPGATGVCDVPSGPGVGPRAD CCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCH ARKAHGRAGKQSRCASTDPGRHSRGEPGAPVVIVEYGDFECPYCARAAAILHELVDSSDG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH QVRQVFRHFPVFDIHPYALTAALAAEVAGAHGRFWEMHDLLFANQDKLADKYLMAFARSL HHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH GIETDLVVGDPAQPYGDAVEADYAGGAELRVQGTPTIFIDGVRYRGRLELGPLRTAVART CCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEECCEEECCHHHHHHHHC GSGRSADDRDDGRRRRVPWARR CCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MEVPEGMVAEGDAGVRVDASAWAGGAFRENSVNGTGFDGDPGATGVCDVPSGPGVGPRAD CCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCH ARKAHGRAGKQSRCASTDPGRHSRGEPGAPVVIVEYGDFECPYCARAAAILHELVDSSDG HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCH QVRQVFRHFPVFDIHPYALTAALAAEVAGAHGRFWEMHDLLFANQDKLADKYLMAFARSL HHHHHHHHCCCEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHH GIETDLVVGDPAQPYGDAVEADYAGGAELRVQGTPTIFIDGVRYRGRLELGPLRTAVART CCCEEEEECCCCCCCCCCCCCCCCCCCEEEECCCCEEEECCCEECCEEECCHHHHHHHHC GSGRSADDRDDGRRRRVPWARR CCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA