Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316697

Identifier: 158316697

GI number: 158316697

Start: 5924538

End: 5926526

Strand: Reverse

Name: 158316697

Synonym: Franean1_4935

Alternate gene names: NA

Gene position: 5926526-5924538 (Counterclockwise)

Preceding gene: 158316698

Following gene: 158316696

Centisome position: 65.98

GC content: 71.49

Gene sequence:

>1989_bases
GTGACGCCGTGGCGGGAGGGTCTGCGCGGCTGGCTGCTCGCCGGGACGGAGCAGGCCCGCCGCCATCCCGGTCCGCACGC
GCAGCCCGAACCGCACCATCCCCGCCACCACTGGTGGCGGGTCATGTGCCTGACCGGCGTCGACTACTTCTCCACGCTGG
GCTACCAGCCGGGCATCGCCATCCTCGCGGCCGGCGCGGTGAGCCCGATCGCCACAGCGGTGCTCGTCGCCGTGACCCTG
TTCGGGGCGCTGCCGGTCTACCGGCGGGTCGCCGGCGAGAGCCCGCGTGGTGAGGGCTCGATCGCGATCCTGGAGAAGCA
GCTCTCCTGGTGGAAGGGCAAGCTGCTGGTCCTGGTGCTCCTCGGCTTCGCCTGCACCGACTTCCTGATCACGATCACCC
TCTCGGCCGCGGACGCCACCGCGCACATCCTGGAGAACCCGTACGCGCCGGACCTGCTCGCCGGCCATGAGGTCGCCGTC
ACGCTGGTGCTCCTGGCCCTGCTCGCGGCCGTGTTCCTGCGCGGGTTCACCGAGGCGGTGGGGATCGCCGTCGTCCTGGT
CGTGGTGTACCTGGCGCTGAACGTGGTCGTCATCGTGGTGTCGCTGTACAAGGTCGCCACCCATCCCTCCCTGCTCGACG
ACTGGCACGCGCTGCTGGTGGCCGAGCATCCCGACGCGTTCGCGCTGGTGGGCGTGGCCCTGATCGTCTTCCCGAAGCTC
GCGCTGGGACTCTCCGGCTTCGAGACCGGTGTAGCGGTGATGCCGCTGATCCGCGGCGGCCCCGATAGCCCCGACGACAC
CGCCGACACCGCCGACACCGCCGACACCGCCGACACCGACGACACCGACGCGAACCCCGCCGGCCGGATCCGCGGCGCGC
GGCGGCTGCTCACCACGGCAGCGCTGATCATGGCCGTGCTGCTGCTCACCAGCAGCCTCGCGACAACGGTCCTCATCCCC
GAGCGGCTCGCGGAGCCCGGCGGCCCGGCGAACGGGCGGGCGCTGGCGTACCTGGCGCACCAGGAGCTGGGTAACGCCTT
CGGCACCGCGTATGACGTCAGCACGATCGCGATCCTGTGGTTCGCCGGCGCCTCGGCGCTGGCCGGCCTGCTCAACCTCG
TGCCCCGCTACCTCCCCAGGTACGGGATGGCACCGCACTGGGCCCGGGCGGTGCGCCCGCTGGTCCTGGTCTTCACCGCC
ATCGGCTTCGCGGTCACGATCATCTTCCGGGCGAGCGTGGACAAGCAGGGCGGCGCCTACGCCACCGGGGTGCTCGTCCT
GATCACCTCGGCGTCGGTCGCTGTCACGATCTCCGCCGCGCGCCGCGGGCGGCGGCGGGCGGCCTTCGGGTTCGGCGCCA
TCGCCGCCGTGTTCGTCTACACGACCGTCGCGAACGTCATCGAGCGGCCGGACGGGCTCATCATCGGTTCGATCTTCATC
CTGTCAATCCTGGTGATCTCCTTCCTCTCCCGGGCCGTGCGGTCCTTCGAGTTGCGGGTCACCGGCGTGCGCCTCGACGA
GACGGCCACCCGGTGGGTCACCGAGGCGGCCCGTTGCGGGGCGCTGCACCTGGTCGCCAACGAGTTCGACACCGGCGACG
CCGCCGAGTACGCCGACAAGGCCAGCAAGGCACACGAGGTGCTGCACGTCCCGCGCGCGGCCCGCCTGCTGTTCCTCGAG
GTGGTCGTCCCGGACTCGTCGGAGTTCGAGGGGCGGCTCGACGTCTGCGGACGGGAGCGGCACGGGTACCGGATCCTGCA
GCTGACCAGCAACTCCGTCCCGAACGCGATCGCGGCCCTGCTCCTGCACCTGCGCGACCTCACCGGGACCAGGCCGAACG
TGTACTTCGAGTGGTCCGAGGGCAACCCGCTGCAGAATCTGGCGCGCTTCGTGTTCTTCGGAGTCGGCGAGGTCGCCTCG
ACGACCCGGGAGATCCTCCGCGAGGCCGAGCCCGACCCACAGCGCCGCCCGTTCGTCCACGTGGCCTGA

Upstream 100 bases:

>100_bases
CGGCTTTACTACGAGCAGGCCCGTCCCGACGGTTCGCACGAGCTGCGCACCGACCTGCACCCCCCGCGCTGACCCGGCCC
CGGCCCACCAGGGCAGCGGG

Downstream 100 bases:

>100_bases
GCGGCTCCGGCGAGGGGGTGTGGCGCTCGCCCATGGCGCCGGCCCGAGGACGGTCGACCGCCGTAGCCTCGTCCCTCGTG
AGACGAGGCGGCAACGGCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Regulatory Protein LysR Family Signature Domain Protein; Integral Membrane Protein; Regulatory Protein

Number of amino acids: Translated: 662; Mature: 661

Protein sequence:

>662_residues
MTPWREGLRGWLLAGTEQARRHPGPHAQPEPHHPRHHWWRVMCLTGVDYFSTLGYQPGIAILAAGAVSPIATAVLVAVTL
FGALPVYRRVAGESPRGEGSIAILEKQLSWWKGKLLVLVLLGFACTDFLITITLSAADATAHILENPYAPDLLAGHEVAV
TLVLLALLAAVFLRGFTEAVGIAVVLVVVYLALNVVVIVVSLYKVATHPSLLDDWHALLVAEHPDAFALVGVALIVFPKL
ALGLSGFETGVAVMPLIRGGPDSPDDTADTADTADTADTDDTDANPAGRIRGARRLLTTAALIMAVLLLTSSLATTVLIP
ERLAEPGGPANGRALAYLAHQELGNAFGTAYDVSTIAILWFAGASALAGLLNLVPRYLPRYGMAPHWARAVRPLVLVFTA
IGFAVTIIFRASVDKQGGAYATGVLVLITSASVAVTISAARRGRRRAAFGFGAIAAVFVYTTVANVIERPDGLIIGSIFI
LSILVISFLSRAVRSFELRVTGVRLDETATRWVTEAARCGALHLVANEFDTGDAAEYADKASKAHEVLHVPRAARLLFLE
VVVPDSSEFEGRLDVCGRERHGYRILQLTSNSVPNAIAALLLHLRDLTGTRPNVYFEWSEGNPLQNLARFVFFGVGEVAS
TTREILREAEPDPQRRPFVHVA

Sequences:

>Translated_662_residues
MTPWREGLRGWLLAGTEQARRHPGPHAQPEPHHPRHHWWRVMCLTGVDYFSTLGYQPGIAILAAGAVSPIATAVLVAVTL
FGALPVYRRVAGESPRGEGSIAILEKQLSWWKGKLLVLVLLGFACTDFLITITLSAADATAHILENPYAPDLLAGHEVAV
TLVLLALLAAVFLRGFTEAVGIAVVLVVVYLALNVVVIVVSLYKVATHPSLLDDWHALLVAEHPDAFALVGVALIVFPKL
ALGLSGFETGVAVMPLIRGGPDSPDDTADTADTADTADTDDTDANPAGRIRGARRLLTTAALIMAVLLLTSSLATTVLIP
ERLAEPGGPANGRALAYLAHQELGNAFGTAYDVSTIAILWFAGASALAGLLNLVPRYLPRYGMAPHWARAVRPLVLVFTA
IGFAVTIIFRASVDKQGGAYATGVLVLITSASVAVTISAARRGRRRAAFGFGAIAAVFVYTTVANVIERPDGLIIGSIFI
LSILVISFLSRAVRSFELRVTGVRLDETATRWVTEAARCGALHLVANEFDTGDAAEYADKASKAHEVLHVPRAARLLFLE
VVVPDSSEFEGRLDVCGRERHGYRILQLTSNSVPNAIAALLLHLRDLTGTRPNVYFEWSEGNPLQNLARFVFFGVGEVAS
TTREILREAEPDPQRRPFVHVA
>Mature_661_residues
TPWREGLRGWLLAGTEQARRHPGPHAQPEPHHPRHHWWRVMCLTGVDYFSTLGYQPGIAILAAGAVSPIATAVLVAVTLF
GALPVYRRVAGESPRGEGSIAILEKQLSWWKGKLLVLVLLGFACTDFLITITLSAADATAHILENPYAPDLLAGHEVAVT
LVLLALLAAVFLRGFTEAVGIAVVLVVVYLALNVVVIVVSLYKVATHPSLLDDWHALLVAEHPDAFALVGVALIVFPKLA
LGLSGFETGVAVMPLIRGGPDSPDDTADTADTADTADTDDTDANPAGRIRGARRLLTTAALIMAVLLLTSSLATTVLIPE
RLAEPGGPANGRALAYLAHQELGNAFGTAYDVSTIAILWFAGASALAGLLNLVPRYLPRYGMAPHWARAVRPLVLVFTAI
GFAVTIIFRASVDKQGGAYATGVLVLITSASVAVTISAARRGRRRAAFGFGAIAAVFVYTTVANVIERPDGLIIGSIFIL
SILVISFLSRAVRSFELRVTGVRLDETATRWVTEAARCGALHLVANEFDTGDAAEYADKASKAHEVLHVPRAARLLFLEV
VVPDSSEFEGRLDVCGRERHGYRILQLTSNSVPNAIAALLLHLRDLTGTRPNVYFEWSEGNPLQNLARFVFFGVGEVAST
TREILREAEPDPQRRPFVHVA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 70995; Mature: 70864

Theoretical pI: Translated: 7.06; Mature: 7.06

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPWREGLRGWLLAGTEQARRHPGPHAQPEPHHPRHHWWRVMCLTGVDYFSTLGYQPGIA
CCCHHHHHHHHEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHH
ILAAGAVSPIATAVLVAVTLFGALPVYRRVAGESPRGEGSIAILEKQLSWWKGKLLVLVL
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGFACTDFLITITLSAADATAHILENPYAPDLLAGHEVAVTLVLLALLAAVFLRGFTEAV
HHHHHHHHHHEEEEECCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GIAVVLVVVYLALNVVVIVVSLYKVATHPSLLDDWHALLVAEHPDAFALVGVALIVFPKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHH
ALGLSGFETGVAVMPLIRGGPDSPDDTADTADTADTADTDDTDANPAGRIRGARRLLTTA
HHCCCCHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALIMAVLLLTSSLATTVLIPERLAEPGGPANGRALAYLAHQELGNAFGTAYDVSTIAILW
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHH
FAGASALAGLLNLVPRYLPRYGMAPHWARAVRPLVLVFTAIGFAVTIIFRASVDKQGGAY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ATGVLVLITSASVAVTISAARRGRRRAAFGFGAIAAVFVYTTVANVIERPDGLIIGSIFI
HHHHHHEEECCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
LSILVISFLSRAVRSFELRVTGVRLDETATRWVTEAARCGALHLVANEFDTGDAAEYADK
HHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH
ASKAHEVLHVPRAARLLFLEVVVPDSSEFEGRLDVCGRERHGYRILQLTSNSVPNAIAAL
HHHHHHHHHCCHHHHEEEEEEECCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHH
LLHLRDLTGTRPNVYFEWSEGNPLQNLARFVFFGVGEVASTTREILREAEPDPQRRPFVH
HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEE
VA
CC
>Mature Secondary Structure 
TPWREGLRGWLLAGTEQARRHPGPHAQPEPHHPRHHWWRVMCLTGVDYFSTLGYQPGIA
CCHHHHHHHHEECCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHCCCCCCHH
ILAAGAVSPIATAVLVAVTLFGALPVYRRVAGESPRGEGSIAILEKQLSWWKGKLLVLVL
HEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
LGFACTDFLITITLSAADATAHILENPYAPDLLAGHEVAVTLVLLALLAAVFLRGFTEAV
HHHHHHHHHHEEEEECCHHHHHHHCCCCCCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
GIAVVLVVVYLALNVVVIVVSLYKVATHPSLLDDWHALLVAEHPDAFALVGVALIVFPKL
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHEEEECCCCHHHHHHHHHHHHHHH
ALGLSGFETGVAVMPLIRGGPDSPDDTADTADTADTADTDDTDANPAGRIRGARRLLTTA
HHCCCCHHCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
ALIMAVLLLTSSLATTVLIPERLAEPGGPANGRALAYLAHQELGNAFGTAYDVSTIAILW
HHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCEEEEHHHHHHHHHHCCHHHHHHHHHHH
FAGASALAGLLNLVPRYLPRYGMAPHWARAVRPLVLVFTAIGFAVTIIFRASVDKQGGAY
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCH
ATGVLVLITSASVAVTISAARRGRRRAAFGFGAIAAVFVYTTVANVIERPDGLIIGSIFI
HHHHHHEEECCCCEEEEHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEHHHHH
LSILVISFLSRAVRSFELRVTGVRLDETATRWVTEAARCGALHLVANEFDTGDAAEYADK
HHHHHHHHHHHHHHHHEEEEEEEEECHHHHHHHHHHHHCCEEEEEECCCCCCCHHHHHHH
ASKAHEVLHVPRAARLLFLEVVVPDSSEFEGRLDVCGRERHGYRILQLTSNSVPNAIAAL
HHHHHHHHHCCHHHHEEEEEEECCCCCCCCCCHHCCCCCCCCEEEEEECCCCCHHHHHHH
LLHLRDLTGTRPNVYFEWSEGNPLQNLARFVFFGVGEVASTTREILREAEPDPQRRPFVH
HHHHHHHCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCEE
VA
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA