Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316660

Identifier: 158316660

GI number: 158316660

Start: 5878303

End: 5879727

Strand: Reverse

Name: 158316660

Synonym: Franean1_4897

Alternate gene names: NA

Gene position: 5879727-5878303 (Counterclockwise)

Preceding gene: 158316666

Following gene: 158316657

Centisome position: 65.46

GC content: 76.84

Gene sequence:

>1425_bases
GTGGGGATCAGCCTCTCCGACGGCCGGTACAGCCCGCTCGCCCTGGTCATGGTGCTCCTGGGGTGTCTCGCGGTGGCCGT
CGCCGTCGCCGTGCCGAGCGGCCGGGGCGACCGGGGCGGCCCGCGGGCCCGGGCCGGCCGCGGCCGGCCGCGGGGCCTTC
CTCCGCGGGCCGCGGGCGTTCGGCTGGCCTGCGCGTCGTGCGGGATCGTGGTCGCCGCCGGGCCGATCCTGCGGCACCCG
CGCTACTACGCCCACGGCCCGGCCGCGACCGCCGCGGACGTGCTGGCCGCCGCCGCCGGTCTGCTCGCCGGCCTGACGCT
CCTGCGCTGCGCCGTGCCACCCGGCGGACGGTGGGCGTACGGGCCCGCACACGGGCGGGCGGCGGGCGGCCGGGTGTTCT
GGGCCGTGCTCGGCCTCGCGCTCGCGGCGGGTGTCGCGACTGTCGCGGCCGCCCCGCAGCCGCGGATCGACGTGTTCCAT
CTCCTCCAGGTCTCCACCTCCGGGCTGGCCCGGGGCACGAACATGTACCGCCAGCAGTGGGCGCCGGATCGGGCCAGCTA
CACCGCCGGCGGGCTGTTCGACGTCTACCCGTACCTGCCGGGGACGTCCCTGCTGCTCGCACCGTTCCGGTGGGTGCTGG
GGGACGTCCGCTACGGGCTGCTGGCCGCGCTCGCCCTGGCGGCGGTGGCCGGCCGCGCGCTCGCGCGGCGGCGGGACGTC
GCCAGGGTCGACGCGGCGGCCGGCCACGGCTTCGGTGTCGGGGGGCATGGCGGGGCGGCGGTCGCCGCCGGTCTGCTCCC
GCTGCTCGTCGTCGTGTTACCGGAGTCCATGTACGCGCTGCAGCAGTCCTGGACCGAGCCGCTGCTGGTCGCGCTGCTCG
CGGTGATGGTCTGGGCGGTCGCCGCGGGCCGGACGGCGCCGGCTGTCGTCGCGTTCGCGCTGGCCCTCGCGAGCAAGCAG
CACGTGGCGTTGCTGGTCCCGCTCGCGGCCTGCTGGCCGGCGTTCGGCCCGCGCCGCACCCTGGCTGCCGCCGGTCTGGG
GGTGGCCGTCGTCGCGCCCTGGGTCATCGCGGCTCCGGGCGACTTCGTCGACGACGCCGTGCGCACCAACCTCGGCTACG
AGGTGCTGGACCACTCGCTGTCCATACCCGGCTGGGCGCACCATTTCGGGATCACCCTCGGCTTCGGCGCGACCGCCGTC
GTGCTGGGCGCGGCCTACCTGCTGGCCTGGCGAGCCCGCGGCGGGGCGGCCGGGTTCTGCGCGGGGTCTGCGCTGGTCCT
CCTCGCTCTCGACGTCATGAACAAGCAGACCTTCTTCAACCACTACACGCTGCCGATGGGGCTGCTCGTGCTGGCGGTGG
CCGCGGGCGCGGCGGCCCCGCCTCAGCGCAGGGTGGAGAACCGCTCGAGGGAGGCACCCTCGTAA

Upstream 100 bases:

>100_bases
CGGGGGGACCACCGCGCCGGCCCCCGCATCAGGCGCCGGGGGCGTGGCGGGGGCCTCGCCCAGCACGGCGGCGCTCCTGC
TGGGCTGGTGTGGGGTCGCC

Downstream 100 bases:

>100_bases
AGATCGCGCTTCTCGACCTGCAACGCCCGGTCCCGTAGGGACGCCAGCTGGTCGGAGAGCACCGCGCACGCGCCCTCCAG
AAAGCGGTACCCGTCCGCCC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 474; Mature: 473

Protein sequence:

>474_residues
MGISLSDGRYSPLALVMVLLGCLAVAVAVAVPSGRGDRGGPRARAGRGRPRGLPPRAAGVRLACASCGIVVAAGPILRHP
RYYAHGPAATAADVLAAAAGLLAGLTLLRCAVPPGGRWAYGPAHGRAAGGRVFWAVLGLALAAGVATVAAAPQPRIDVFH
LLQVSTSGLARGTNMYRQQWAPDRASYTAGGLFDVYPYLPGTSLLLAPFRWVLGDVRYGLLAALALAAVAGRALARRRDV
ARVDAAAGHGFGVGGHGGAAVAAGLLPLLVVVLPESMYALQQSWTEPLLVALLAVMVWAVAAGRTAPAVVAFALALASKQ
HVALLVPLAACWPAFGPRRTLAAAGLGVAVVAPWVIAAPGDFVDDAVRTNLGYEVLDHSLSIPGWAHHFGITLGFGATAV
VLGAAYLLAWRARGGAAGFCAGSALVLLALDVMNKQTFFNHYTLPMGLLVLAVAAGAAAPPQRRVENRSREAPS

Sequences:

>Translated_474_residues
MGISLSDGRYSPLALVMVLLGCLAVAVAVAVPSGRGDRGGPRARAGRGRPRGLPPRAAGVRLACASCGIVVAAGPILRHP
RYYAHGPAATAADVLAAAAGLLAGLTLLRCAVPPGGRWAYGPAHGRAAGGRVFWAVLGLALAAGVATVAAAPQPRIDVFH
LLQVSTSGLARGTNMYRQQWAPDRASYTAGGLFDVYPYLPGTSLLLAPFRWVLGDVRYGLLAALALAAVAGRALARRRDV
ARVDAAAGHGFGVGGHGGAAVAAGLLPLLVVVLPESMYALQQSWTEPLLVALLAVMVWAVAAGRTAPAVVAFALALASKQ
HVALLVPLAACWPAFGPRRTLAAAGLGVAVVAPWVIAAPGDFVDDAVRTNLGYEVLDHSLSIPGWAHHFGITLGFGATAV
VLGAAYLLAWRARGGAAGFCAGSALVLLALDVMNKQTFFNHYTLPMGLLVLAVAAGAAAPPQRRVENRSREAPS
>Mature_473_residues
GISLSDGRYSPLALVMVLLGCLAVAVAVAVPSGRGDRGGPRARAGRGRPRGLPPRAAGVRLACASCGIVVAAGPILRHPR
YYAHGPAATAADVLAAAAGLLAGLTLLRCAVPPGGRWAYGPAHGRAAGGRVFWAVLGLALAAGVATVAAAPQPRIDVFHL
LQVSTSGLARGTNMYRQQWAPDRASYTAGGLFDVYPYLPGTSLLLAPFRWVLGDVRYGLLAALALAAVAGRALARRRDVA
RVDAAAGHGFGVGGHGGAAVAAGLLPLLVVVLPESMYALQQSWTEPLLVALLAVMVWAVAAGRTAPAVVAFALALASKQH
VALLVPLAACWPAFGPRRTLAAAGLGVAVVAPWVIAAPGDFVDDAVRTNLGYEVLDHSLSIPGWAHHFGITLGFGATAVV
LGAAYLLAWRARGGAAGFCAGSALVLLALDVMNKQTFFNHYTLPMGLLVLAVAAGAAAPPQRRVENRSREAPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48432; Mature: 48301

Theoretical pI: Translated: 10.87; Mature: 10.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGISLSDGRYSPLALVMVLLGCLAVAVAVAVPSGRGDRGGPRARAGRGRPRGLPPRAAGV
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
RLACASCGIVVAAGPILRHPRYYAHGPAATAADVLAAAAGLLAGLTLLRCAVPPGGRWAY
EEHHHHCCCCEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GPAHGRAAGGRVFWAVLGLALAAGVATVAAAPQPRIDVFHLLQVSTSGLARGTNMYRQQW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
APDRASYTAGGLFDVYPYLPGTSLLLAPFRWVLGDVRYGLLAALALAAVAGRALARRRDV
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVDAAAGHGFGVGGHGGAAVAAGLLPLLVVVLPESMYALQQSWTEPLLVALLAVMVWAV
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AAGRTAPAVVAFALALASKQHVALLVPLAACWPAFGPRRTLAAAGLGVAVVAPWVIAAPG
HCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHCCCHHHHHCCCEECCC
DFVDDAVRTNLGYEVLDHSLSIPGWAHHFGITLGFGATAVVLGAAYLLAWRARGGAAGFC
HHHHHHHHHCCCHHHHHHCCCCCCHHHHHCEEECCHHHHHHHHHHHHHHHHCCCCCCCHH
AGSALVLLALDVMNKQTFFNHYTLPMGLLVLAVAAGAAAPPQRRVENRSREAPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
GISLSDGRYSPLALVMVLLGCLAVAVAVAVPSGRGDRGGPRARAGRGRPRGLPPRAAGV
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHCC
RLACASCGIVVAAGPILRHPRYYAHGPAATAADVLAAAAGLLAGLTLLRCAVPPGGRWAY
EEHHHHCCCCEECCHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
GPAHGRAAGGRVFWAVLGLALAAGVATVAAAPQPRIDVFHLLQVSTSGLARGTNMYRQQW
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHC
APDRASYTAGGLFDVYPYLPGTSLLLAPFRWVLGDVRYGLLAALALAAVAGRALARRRDV
CCCCCCCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARVDAAAGHGFGVGGHGGAAVAAGLLPLLVVVLPESMYALQQSWTEPLLVALLAVMVWAV
HHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH
AAGRTAPAVVAFALALASKQHVALLVPLAACWPAFGPRRTLAAAGLGVAVVAPWVIAAPG
HCCCCHHHHHHHHHHHHCCCCEEEEEEHHHHCCCCCCHHHHHHHCCCHHHHHCCCEECCC
DFVDDAVRTNLGYEVLDHSLSIPGWAHHFGITLGFGATAVVLGAAYLLAWRARGGAAGFC
HHHHHHHHHCCCHHHHHHCCCCCCHHHHHCEEECCHHHHHHHHHHHHHHHHCCCCCCCHH
AGSALVLLALDVMNKQTFFNHYTLPMGLLVLAVAAGAAAPPQRRVENRSREAPS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA