| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316656
Identifier: 158316656
GI number: 158316656
Start: 5872160
End: 5872939
Strand: Reverse
Name: 158316656
Synonym: Franean1_4893
Alternate gene names: NA
Gene position: 5872939-5872160 (Counterclockwise)
Preceding gene: 158316657
Following gene: 158316655
Centisome position: 65.39
GC content: 73.97
Gene sequence:
>780_bases GTGAGCCTCTCCGCGGCCGGTGCCGACCCTGGGCGGCGTGCGCCGCTGGACCCGCTCGACAGCGGCGGGCTGGGCGTGAG CGAGGCGTTGGCGCTCCTGCGCACCGGCGAGCTGGAGATCACCGGGCGGCTGGTCGACGCCAGCAACGCCACGCTGCTGT GCGAGATCCGGGCCGACGAGCTCTGCGGGCGGTGCGTGTACAAGCCGGTGCGCGGCGAACGCGCCCTGTGGGACTTCCCG GACGGGACGCTGGCGGCCCGTGAGCTGGCCGCCTATGAGGTCGCCGAGGCGATGGACCCGGGCATCGTCCCACCGACCGT CATGCGGGACGGCCCGTTCGGCGCGGGGATGGTCCAGCTCTGGATCGACGTCGACACGACCGTCGACCTCGTCGCGCTGA CCCGGTCGGACGACCCGCAGCTGCGGCGTATCGCGCTGTTCGACGCCGTCATCAACAACGCCGACCGGAAGGGCGGCCAC CTGCTCCCGGCGCCGTCCGGGCGGGTGCACGGCATTGACCACGGCGTGACGTTCCACACGGACGACAAGCTGCGCACGCT GCTGTGGACCTGGCGGGGCCGGCGGCTGGACGCGGCGGAGACCACGCTCCTGCAGGGCGTGGGCGACGCGCTGGGCGCGG ATCTGGGGGAGCGGCTCGAGCCGCTGCTCACCACGACCGAGCTACGGGCACTGGGAGCCCGGGTCGACCGGCTCCTGGCC GAGGGCCGTTTCCCGTTGCCCTCCGGGGACTGGCCGGCCATTCCCTGGCCGCCGTTCTGA
Upstream 100 bases:
>100_bases CCGTGGACGGTGCCCGGCCGGGCACGGTCTCCGAGGCGGCCGGGGCCGGATCGGGCGGGGCCACATCCCCGGTCGCGCCG CCGACGTCCAAACTGGAACC
Downstream 100 bases:
>100_bases GCCGGCGGACGCGGCCCGACGGGGCCGCCGGCCGCGACACGCCCGGGCGGGGGTTGTGCCCTGCTCGTCGCCGGCCTGCC CGGCTTGTCCCGCGGCCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: Phosphatidylinositol 3- And 4-Kinase; Phosphatidylinositol 3- And 4-Kinase Catalytic; Phosphatidylinositol 3-And 4-Kinase Catalytic; Phosphatidylinositol 3- And 4-Kinase Family Protein; Phosphatidylinositol 3-And 4-Kinase Family Protein
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSLSAAGADPGRRAPLDPLDSGGLGVSEALALLRTGELEITGRLVDASNATLLCEIRADELCGRCVYKPVRGERALWDFP DGTLAARELAAYEVAEAMDPGIVPPTVMRDGPFGAGMVQLWIDVDTTVDLVALTRSDDPQLRRIALFDAVINNADRKGGH LLPAPSGRVHGIDHGVTFHTDDKLRTLLWTWRGRRLDAAETTLLQGVGDALGADLGERLEPLLTTTELRALGARVDRLLA EGRFPLPSGDWPAIPWPPF
Sequences:
>Translated_259_residues MSLSAAGADPGRRAPLDPLDSGGLGVSEALALLRTGELEITGRLVDASNATLLCEIRADELCGRCVYKPVRGERALWDFP DGTLAARELAAYEVAEAMDPGIVPPTVMRDGPFGAGMVQLWIDVDTTVDLVALTRSDDPQLRRIALFDAVINNADRKGGH LLPAPSGRVHGIDHGVTFHTDDKLRTLLWTWRGRRLDAAETTLLQGVGDALGADLGERLEPLLTTTELRALGARVDRLLA EGRFPLPSGDWPAIPWPPF >Mature_258_residues SLSAAGADPGRRAPLDPLDSGGLGVSEALALLRTGELEITGRLVDASNATLLCEIRADELCGRCVYKPVRGERALWDFPD GTLAARELAAYEVAEAMDPGIVPPTVMRDGPFGAGMVQLWIDVDTTVDLVALTRSDDPQLRRIALFDAVINNADRKGGHL LPAPSGRVHGIDHGVTFHTDDKLRTLLWTWRGRRLDAAETTLLQGVGDALGADLGERLEPLLTTTELRALGARVDRLLAE GRFPLPSGDWPAIPWPPF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27882; Mature: 27751
Theoretical pI: Translated: 4.63; Mature: 4.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLSAAGADPGRRAPLDPLDSGGLGVSEALALLRTGELEITGRLVDASNATLLCEIRADE CCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECHHH LCGRCVYKPVRGERALWDFPDGTLAARELAAYEVAEAMDPGIVPPTVMRDGPFGAGMVQL HHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE WIDVDTTVDLVALTRSDDPQLRRIALFDAVINNADRKGGHLLPAPSGRVHGIDHGVTFHT EEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCEEEEC DDKLRTLLWTWRGRRLDAAETTLLQGVGDALGADLGERLEPLLTTTELRALGARVDRLLA CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRFPLPSGDWPAIPWPPF CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLSAAGADPGRRAPLDPLDSGGLGVSEALALLRTGELEITGRLVDASNATLLCEIRADE CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEEEEEECCCCEEEEEECHHH LCGRCVYKPVRGERALWDFPDGTLAARELAAYEVAEAMDPGIVPPTVMRDGPFGAGMVQL HHHHHHCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEEE WIDVDTTVDLVALTRSDDPQLRRIALFDAVINNADRKGGHLLPAPSGRVHGIDHGVTFHT EEECCCCEEEEEEECCCCHHHHHHHHHHHHHHCCCCCCCEECCCCCCCEEECCCCEEEEC DDKLRTLLWTWRGRRLDAAETTLLQGVGDALGADLGERLEPLLTTTELRALGARVDRLLA CHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EGRFPLPSGDWPAIPWPPF CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA