| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316629
Identifier: 158316629
GI number: 158316629
Start: 5838535
End: 5838777
Strand: Reverse
Name: 158316629
Synonym: Franean1_4866
Alternate gene names: NA
Gene position: 5838777-5838535 (Counterclockwise)
Preceding gene: 158316630
Following gene: 158316628
Centisome position: 65.01
GC content: 70.37
Gene sequence:
>243_bases ATGCCCGACTCCGCCGCTTCTTCGCCCGCCGCCACGCCGCTCGCCGGCGGTACCGCTCGTCCCCTGCCGTTGCCTCTTCC GCTGCGCGACATCGTCCCGTGGGCGGTGCTCGTCGGCGCGCTGATGCTGCTGGGCATCTACTTCGTCGGTTCCGAGGAGG GGGCGTTCTCCCTCATCGGCGGAACCTGGGTGCACGAGTTCGTGCACGACGGCCGACACCTGCTGGGCTTCCCCTGCCAC TGA
Upstream 100 bases:
>100_bases GCCACTGTGACCGCTGGAGCATTCCGTTTCCAGTCCGGAAGTCAGACCCGTTTCATCACGAATCCACCAGCCGGACGCGT GATCCCTGGGAGGTCTTCGC
Downstream 100 bases:
>100_bases CCGCCTGTCCCGGAGGATTCTCTCCGGCCTACGGCGGAGGCCGTTTTACATGATGCGCAGGCTGCTTGTCTTTGGCATGC TCGCAGGTTTCTTCGCCGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 80; Mature: 79
Protein sequence:
>80_residues MPDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIGGTWVHEFVHDGRHLLGFPCH
Sequences:
>Translated_80_residues MPDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIGGTWVHEFVHDGRHLLGFPCH >Mature_79_residues PDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIGGTWVHEFVHDGRHLLGFPCH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8373; Mature: 8242
Theoretical pI: Translated: 6.05; Mature: 6.05
Prosite motif: PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIG CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH GTWVHEFVHDGRHLLGFPCH HHHHHHHHHCCCCCCCCCCC >Mature Secondary Structure PDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIG CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH GTWVHEFVHDGRHLLGFPCH HHHHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA