Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316629

Identifier: 158316629

GI number: 158316629

Start: 5838535

End: 5838777

Strand: Reverse

Name: 158316629

Synonym: Franean1_4866

Alternate gene names: NA

Gene position: 5838777-5838535 (Counterclockwise)

Preceding gene: 158316630

Following gene: 158316628

Centisome position: 65.01

GC content: 70.37

Gene sequence:

>243_bases
ATGCCCGACTCCGCCGCTTCTTCGCCCGCCGCCACGCCGCTCGCCGGCGGTACCGCTCGTCCCCTGCCGTTGCCTCTTCC
GCTGCGCGACATCGTCCCGTGGGCGGTGCTCGTCGGCGCGCTGATGCTGCTGGGCATCTACTTCGTCGGTTCCGAGGAGG
GGGCGTTCTCCCTCATCGGCGGAACCTGGGTGCACGAGTTCGTGCACGACGGCCGACACCTGCTGGGCTTCCCCTGCCAC
TGA

Upstream 100 bases:

>100_bases
GCCACTGTGACCGCTGGAGCATTCCGTTTCCAGTCCGGAAGTCAGACCCGTTTCATCACGAATCCACCAGCCGGACGCGT
GATCCCTGGGAGGTCTTCGC

Downstream 100 bases:

>100_bases
CCGCCTGTCCCGGAGGATTCTCTCCGGCCTACGGCGGAGGCCGTTTTACATGATGCGCAGGCTGCTTGTCTTTGGCATGC
TCGCAGGTTTCTTCGCCGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 80; Mature: 79

Protein sequence:

>80_residues
MPDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIGGTWVHEFVHDGRHLLGFPCH

Sequences:

>Translated_80_residues
MPDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIGGTWVHEFVHDGRHLLGFPCH
>Mature_79_residues
PDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIGGTWVHEFVHDGRHLLGFPCH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8373; Mature: 8242

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIG
CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
GTWVHEFVHDGRHLLGFPCH
HHHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure 
PDSAASSPAATPLAGGTARPLPLPLPLRDIVPWAVLVGALMLLGIYFVGSEEGAFSLIG
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEHHH
GTWVHEFVHDGRHLLGFPCH
HHHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA