Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158316628

Identifier: 158316628

GI number: 158316628

Start: 5837685

End: 5838485

Strand: Reverse

Name: 158316628

Synonym: Franean1_4865

Alternate gene names: NA

Gene position: 5838485-5837685 (Counterclockwise)

Preceding gene: 158316629

Following gene: 158316627

Centisome position: 65.0

GC content: 74.28

Gene sequence:

>801_bases
ATGATGCGCAGGCTGCTTGTCTTTGGCATGCTCGCAGGTTTCTTCGCCGGTCTGCTGGCTTTCGGGTTCGCGTCGATCAC
CGGCGAGCCCCAGGTGGACGCCTCGATCGCCATCGAGGAGGCGTCGGCGCCCCCGCCGGCTCCCGGTGAGCACGCCGAGG
AGGAGGTCGTCTCCCGGAGCACCCAGAAGGGTCTGGGTCTCGCGGTCGCGACCGGGGTGTACGGCATCGCGATCGGTGGG
CTGTTCGCGATCGCGTGCGCGGTCGCCTACGGCCGCATCGGCACCGGCGGGATGCGGCCCACCGCCGCGGTGGTCGCGGT
GGTCGGTTTCGTCGCGGTGGCCGTGGTGCCGTTCCTGAAGTACCCGGCGAACCCGCCGGCGGTCGGCAACCCGGACACGA
TCGACCGCCGGACCGGCCTCTACGTCGTCATGGTCCTGGTGGCGGTGCTCGCCGCGCTCATCGCGGCCCAGGCCGGGCGC
CTGGTGTCGGCCCGTCTCGGCACCTGGAACGCCGCGCTCGCGGCGGCGGCGGTGTTCGCCGTGCTGGTGACCGTGGCCGC
GGTCGTCATGCCGGTGATCAACGAGGTGCCGGCGTCCTTCCCGGCCGAGCTGCTGTGGCGGTTCCGGCTGGCCTCGCTGG
GCACCCAGGCGGTGCTGTGGGCGACGCTCGGACTGGTGTTCGGGCCCCTCGCCCACCGGGTGCTGAGCCCGGCGCCGGCA
CCGGCGCGCCAGGCCGGCACCGTCGCCCGCGCGGACGAGACCCGCGCCTCCAGCCAGGCCACGGCGCCGTCGGCCGGGTG
A

Upstream 100 bases:

>100_bases
CACGAGTTCGTGCACGACGGCCGACACCTGCTGGGCTTCCCCTGCCACTGACCGCCTGTCCCGGAGGATTCTCTCCGGCC
TACGGCGGAGGCCGTTTTAC

Downstream 100 bases:

>100_bases
GCCGCGCCCGCACGGTGGGGCTCGTCCTCGGCGCGGCCCTCGACGCGGTGCTCGCCGACCCTGCCCGCGGCCATCCCGTG
GCCGGTTTCGGGCGGGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 266; Mature: 266

Protein sequence:

>266_residues
MMRRLLVFGMLAGFFAGLLAFGFASITGEPQVDASIAIEEASAPPPAPGEHAEEEVVSRSTQKGLGLAVATGVYGIAIGG
LFAIACAVAYGRIGTGGMRPTAAVVAVVGFVAVAVVPFLKYPANPPAVGNPDTIDRRTGLYVVMVLVAVLAALIAAQAGR
LVSARLGTWNAALAAAAVFAVLVTVAAVVMPVINEVPASFPAELLWRFRLASLGTQAVLWATLGLVFGPLAHRVLSPAPA
PARQAGTVARADETRASSQATAPSAG

Sequences:

>Translated_266_residues
MMRRLLVFGMLAGFFAGLLAFGFASITGEPQVDASIAIEEASAPPPAPGEHAEEEVVSRSTQKGLGLAVATGVYGIAIGG
LFAIACAVAYGRIGTGGMRPTAAVVAVVGFVAVAVVPFLKYPANPPAVGNPDTIDRRTGLYVVMVLVAVLAALIAAQAGR
LVSARLGTWNAALAAAAVFAVLVTVAAVVMPVINEVPASFPAELLWRFRLASLGTQAVLWATLGLVFGPLAHRVLSPAPA
PARQAGTVARADETRASSQATAPSAG
>Mature_266_residues
MMRRLLVFGMLAGFFAGLLAFGFASITGEPQVDASIAIEEASAPPPAPGEHAEEEVVSRSTQKGLGLAVATGVYGIAIGG
LFAIACAVAYGRIGTGGMRPTAAVVAVVGFVAVAVVPFLKYPANPPAVGNPDTIDRRTGLYVVMVLVAVLAALIAAQAGR
LVSARLGTWNAALAAAAVFAVLVTVAAVVMPVINEVPASFPAELLWRFRLASLGTQAVLWATLGLVFGPLAHRVLSPAPA
PARQAGTVARADETRASSQATAPSAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26950; Mature: 26950

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRRLLVFGMLAGFFAGLLAFGFASITGEPQVDASIAIEEASAPPPAPGEHAEEEVVSRS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCHHHHHHHHHH
TQKGLGLAVATGVYGIAIGGLFAIACAVAYGRIGTGGMRPTAAVVAVVGFVAVAVVPFLK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YPANPPAVGNPDTIDRRTGLYVVMVLVAVLAALIAAQAGRLVSARLGTWNAALAAAAVFA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHH
VLVTVAAVVMPVINEVPASFPAELLWRFRLASLGTQAVLWATLGLVFGPLAHRVLSPAPA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
PARQAGTVARADETRASSQATAPSAG
CHHHHCCHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MMRRLLVFGMLAGFFAGLLAFGFASITGEPQVDASIAIEEASAPPPAPGEHAEEEVVSRS
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHEEEECCCCCCCCCCCHHHHHHHHHH
TQKGLGLAVATGVYGIAIGGLFAIACAVAYGRIGTGGMRPTAAVVAVVGFVAVAVVPFLK
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
YPANPPAVGNPDTIDRRTGLYVVMVLVAVLAALIAAQAGRLVSARLGTWNAALAAAAVFA
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHCCHHHHHHHHHHHH
VLVTVAAVVMPVINEVPASFPAELLWRFRLASLGTQAVLWATLGLVFGPLAHRVLSPAPA
HHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHCCCCC
PARQAGTVARADETRASSQATAPSAG
CHHHHCCHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA