| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316558
Identifier: 158316558
GI number: 158316558
Start: 5724547
End: 5725323
Strand: Reverse
Name: 158316558
Synonym: Franean1_4794
Alternate gene names: NA
Gene position: 5725323-5724547 (Counterclockwise)
Preceding gene: 158316559
Following gene: 158316557
Centisome position: 63.74
GC content: 72.33
Gene sequence:
>777_bases ATGAAGGCTGACGACGCCTACCAGGCAGGTCGCCTGCTCGCGCTCGCGCTCGACCACACCGCACGGCCGGGGAGCAAACA TCCGGACTACGAACGGCTGCTGACCCGCTGGCGTACCGATGCCCCGTTCCACGAGGTGGTGCGGACCTTCGCCGAGGGCC TCGGTGTGGAGATCCTCGGTGCCACCCCGCAGGGCCTCACGGTGTCAGGAGGGCTGGACGGTCCGTTCGCCGTTCGGGCC GATGACCTCCCGTCGGTCCGCGCCGCGTCCCGGTCGACCGACCGGCTGCTCGCCGGGCTGGTCCTGCTCGCCACCGCCGC GTACGCCTACCCGACGGGCAGCGACCTCGTCGAGGCGTCCACGCCAGCGGTGCGACCACGGGAGCTGATGGCGTTCATCA CCCGTGCGGCCGAGCGGGTGAAGAACCTGACCAGCGAGGACGACCTCGATCGCGGCGCGGCGCTCGCGGCCAGGGCATGG CTGGAGCTGCCACCAGTGCTGCCCGGGGAACGCGGTCGGCTGAAGCGGGAGTGCCAGCTGTGGCATACCCGTACCTATCT CGGCTGGCTGGCCGAGCAGGGGCGGGCACGGCCGATCGCCGCCATCGCCGGGGACGGCGAATCCGCCTACCAGCTCACCG ACCGGTTCCGGCTCGGCGTCTCCGACGTCGTCGACCACATCGCCTTCACGGTCCTCGCCGAGGCCCGGGTCGCCGAGCGC GAGGGCACCTCGCCGCCCGATCTCGACGGTCTGGCCGCGGATCCTGGAGGGGCGTGA
Upstream 100 bases:
>100_bases GCGGTGACGATCTGCTGGTGGGGCGGGCCTCCGGCCTGGCCGTACGGGAGGCCGAGGGGACAGCGGGCGGCGCGGTCGTG GCGTCGGGGGAGAGGTTGCC
Downstream 100 bases:
>100_bases TGTACAAGCTTCGCCGTCTGCACCTGGACACCGTCGGCGTGCGTGAGAACCGGTTCGCCGCGCTGACCCTGGACACCGTC GACGTGGATGGGAACCCGGC
Product: membrane protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 258; Mature: 258
Protein sequence:
>258_residues MKADDAYQAGRLLALALDHTARPGSKHPDYERLLTRWRTDAPFHEVVRTFAEGLGVEILGATPQGLTVSGGLDGPFAVRA DDLPSVRAASRSTDRLLAGLVLLATAAYAYPTGSDLVEASTPAVRPRELMAFITRAAERVKNLTSEDDLDRGAALAARAW LELPPVLPGERGRLKRECQLWHTRTYLGWLAEQGRARPIAAIAGDGESAYQLTDRFRLGVSDVVDHIAFTVLAEARVAER EGTSPPDLDGLAADPGGA
Sequences:
>Translated_258_residues MKADDAYQAGRLLALALDHTARPGSKHPDYERLLTRWRTDAPFHEVVRTFAEGLGVEILGATPQGLTVSGGLDGPFAVRA DDLPSVRAASRSTDRLLAGLVLLATAAYAYPTGSDLVEASTPAVRPRELMAFITRAAERVKNLTSEDDLDRGAALAARAW LELPPVLPGERGRLKRECQLWHTRTYLGWLAEQGRARPIAAIAGDGESAYQLTDRFRLGVSDVVDHIAFTVLAEARVAER EGTSPPDLDGLAADPGGA >Mature_258_residues MKADDAYQAGRLLALALDHTARPGSKHPDYERLLTRWRTDAPFHEVVRTFAEGLGVEILGATPQGLTVSGGLDGPFAVRA DDLPSVRAASRSTDRLLAGLVLLATAAYAYPTGSDLVEASTPAVRPRELMAFITRAAERVKNLTSEDDLDRGAALAARAW LELPPVLPGERGRLKRECQLWHTRTYLGWLAEQGRARPIAAIAGDGESAYQLTDRFRLGVSDVVDHIAFTVLAEARVAER EGTSPPDLDGLAADPGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27716; Mature: 27716
Theoretical pI: Translated: 5.41; Mature: 5.41
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKADDAYQAGRLLALALDHTARPGSKHPDYERLLTRWRTDAPFHEVVRTFAEGLGVEILG CCCCCHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEC ATPQGLTVSGGLDGPFAVRADDLPSVRAASRSTDRLLAGLVLLATAAYAYPTGSDLVEAS CCCCCEEEECCCCCCEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHCC TPAVRPRELMAFITRAAERVKNLTSEDDLDRGAALAARAWLELPPVLPGERGRLKRECQL CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WHTRTYLGWLAEQGRARPIAAIAGDGESAYQLTDRFRLGVSDVVDHIAFTVLAEARVAER HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EGTSPPDLDGLAADPGGA CCCCCCCCCCCCCCCCCC >Mature Secondary Structure MKADDAYQAGRLLALALDHTARPGSKHPDYERLLTRWRTDAPFHEVVRTFAEGLGVEILG CCCCCHHHHCCEEEEEECCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHHCCCEEEEC ATPQGLTVSGGLDGPFAVRADDLPSVRAASRSTDRLLAGLVLLATAAYAYPTGSDLVEAS CCCCCEEEECCCCCCEEEECCCCCCHHHHHCHHHHHHHHHHHHHHHHHCCCCCCCHHHCC TPAVRPRELMAFITRAAERVKNLTSEDDLDRGAALAARAWLELPPVLPGERGRLKRECQL CCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHH WHTRTYLGWLAEQGRARPIAAIAGDGESAYQLTDRFRLGVSDVVDHIAFTVLAEARVAER HHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH EGTSPPDLDGLAADPGGA CCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA