| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cyp123 [H]
Identifier: 158316550
GI number: 158316550
Start: 5711653
End: 5712660
Strand: Reverse
Name: cyp123 [H]
Synonym: Franean1_4786
Alternate gene names: 158316550
Gene position: 5712660-5711653 (Counterclockwise)
Preceding gene: 158316554
Following gene: 158316549
Centisome position: 63.6
GC content: 66.87
Gene sequence:
>1008_bases ATGAGTCGTAGCGGTCCGGTCTACTGGGATCCCTTCGACCGCGATATCGCCGGCGACCCCTACCCGGTCTACCAACGGCT GCGCGCGGAGGCGCCGCTCTACTACAATGACCGGCAAGACTTCTACGCCCTCAGCCGCCACGAGGACATCGACCGCTGCC TGACCGACTGGAAGACGTTCTCGTCGGCCCGCGGGCCGATCCTGGAAATCATCAAGGCGAACGTCGAAATTCCGCCGGGC ACGTTGCTGATGGAGGACCCGCCGGCTCACGACATCCACCGCGCTCTTCTCGCGCGCGTTTTCACCCCGCGGCGGGTCAC CTCGCTCGAGCCGCAGGTCCGGGACTTCTGCCGGCGCTGCCTTGACAGACTCGTCGACGTCGACAGCTTCGACCTCATGG CGGAGTTCGCCAACGAGGTGCCGATGCGCGTGATCGGGATGCTGCTCGGCATCCCGGAGTCGGACCAGCCGGCGATCCGC GAGCGCGCGGACGCGAAACTGCGCACCGAGCCGGGGCAGCAGATGAAGGTGTCCCAGCAGGCACTCATGGACTCGGACCT GTTCGCGGAGTACATCGACTGGCGGGCCGAGCATCCGTCGGACGACCTGATGACGGAGCTGCTACGCGCCGAGTTCGAGG AGACGCTGCGGTTCGAGCCGACCGGTCACGCGATCGCCCGCTACGTCACGACCGGCGTCGAGTTACATGGCCGCACGGTG CCTGCCGGCAGCGCGATGATGCTCCTCATCGCCTCGGCGAACCGGGACGAGAACAGCTGGTCGGACCCTGACCGGTTCGA CGTCCACCGCGGAACCGGTCACCTCCGGACCTTCGGCCTCGGAACCCATTACTGCCTCGGAGCCGCGCTGGCCCGGCTTG AAGCCAGGGTGGCGCTCGAGGAGATCCTGAAACGCTTCCCGCGATGGAACGTCGACTGGGAGAACTCCGCGCTTTCGTCG ACGTCGACGATGCGCGGCTGGGAGACGCTGCCGATCACCGTCGGTTAG
Upstream 100 bases:
>100_bases GACAGCGGCGTCCCATCAAGTTAGAACGACCGTTAAAATTTCGTTTTCGGGTCGTGGCTGACCGGCCGCGGCGCGGCGCG GATCGAAGGAGGCTCGCCAG
Downstream 100 bases:
>100_bases CTCGAGTTACGCCGGTCCGCACGGCACGGCTCGCCCGCACCACCGCACCACGACTCAGGGAGAAACAGATGGGAAAGCTC GACGGCAAGGTCGCGTTCAT
Product: cytochrome P450 monooxygenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSRSGPVYWDPFDRDIAGDPYPVYQRLRAEAPLYYNDRQDFYALSRHEDIDRCLTDWKTFSSARGPILEIIKANVEIPPG TLLMEDPPAHDIHRALLARVFTPRRVTSLEPQVRDFCRRCLDRLVDVDSFDLMAEFANEVPMRVIGMLLGIPESDQPAIR ERADAKLRTEPGQQMKVSQQALMDSDLFAEYIDWRAEHPSDDLMTELLRAEFEETLRFEPTGHAIARYVTTGVELHGRTV PAGSAMMLLIASANRDENSWSDPDRFDVHRGTGHLRTFGLGTHYCLGAALARLEARVALEEILKRFPRWNVDWENSALSS TSTMRGWETLPITVG
Sequences:
>Translated_335_residues MSRSGPVYWDPFDRDIAGDPYPVYQRLRAEAPLYYNDRQDFYALSRHEDIDRCLTDWKTFSSARGPILEIIKANVEIPPG TLLMEDPPAHDIHRALLARVFTPRRVTSLEPQVRDFCRRCLDRLVDVDSFDLMAEFANEVPMRVIGMLLGIPESDQPAIR ERADAKLRTEPGQQMKVSQQALMDSDLFAEYIDWRAEHPSDDLMTELLRAEFEETLRFEPTGHAIARYVTTGVELHGRTV PAGSAMMLLIASANRDENSWSDPDRFDVHRGTGHLRTFGLGTHYCLGAALARLEARVALEEILKRFPRWNVDWENSALSS TSTMRGWETLPITVG >Mature_334_residues SRSGPVYWDPFDRDIAGDPYPVYQRLRAEAPLYYNDRQDFYALSRHEDIDRCLTDWKTFSSARGPILEIIKANVEIPPGT LLMEDPPAHDIHRALLARVFTPRRVTSLEPQVRDFCRRCLDRLVDVDSFDLMAEFANEVPMRVIGMLLGIPESDQPAIRE RADAKLRTEPGQQMKVSQQALMDSDLFAEYIDWRAEHPSDDLMTELLRAEFEETLRFEPTGHAIARYVTTGVELHGRTVP AGSAMMLLIASANRDENSWSDPDRFDVHRGTGHLRTFGLGTHYCLGAALARLEARVALEEILKRFPRWNVDWENSALSST STMRGWETLPITVG
Specific function: Unknown
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 38220; Mature: 38088
Theoretical pI: Translated: 4.97; Mature: 4.97
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSGPVYWDPFDRDIAGDPYPVYQRLRAEAPLYYNDRQDFYALSRHEDIDRCLTDWKTF CCCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH SSARGPILEIIKANVEIPPGTLLMEDPPAHDIHRALLARVFTPRRVTSLEPQVRDFCRRC HCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHH LDRLVDVDSFDLMAEFANEVPMRVIGMLLGIPESDQPAIRERADAKLRTEPGQQMKVSQQ HHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHH ALMDSDLFAEYIDWRAEHPSDDLMTELLRAEFEETLRFEPTGHAIARYVTTGVELHGRTV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCC PAGSAMMLLIASANRDENSWSDPDRFDVHRGTGHLRTFGLGTHYCLGAALARLEARVALE CCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH EILKRFPRWNVDWENSALSSTSTMRGWETLPITVG HHHHHCCCCCCCCCCCHHCCCHHHCCCEEECEECC >Mature Secondary Structure SRSGPVYWDPFDRDIAGDPYPVYQRLRAEAPLYYNDRQDFYALSRHEDIDRCLTDWKTF CCCCCCEECCCCCCCCCCCHHHHHHHHHCCCCEECCCHHHHHHHHHHHHHHHHHHHHHH SSARGPILEIIKANVEIPPGTLLMEDPPAHDIHRALLARVFTPRRVTSLEPQVRDFCRRC HCCCCHHHHHHHHCCCCCCCEEEECCCCHHHHHHHHHHHHCCCCHHCCCCHHHHHHHHHH LDRLVDVDSFDLMAEFANEVPMRVIGMLLGIPESDQPAIRERADAKLRTEPGQQMKVSQQ HHHHHCCCHHHHHHHHHHHCHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCHHHHHHHH ALMDSDLFAEYIDWRAEHPSDDLMTELLRAEFEETLRFEPTGHAIARYVTTGVELHGRTV HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCHHCCCCCC PAGSAMMLLIASANRDENSWSDPDRFDVHRGTGHLRTFGLGTHYCLGAALARLEARVALE CCCCEEEEEEEECCCCCCCCCCCCCCEECCCCCCEEEECCCHHHHHHHHHHHHHHHHHHH EILKRFPRWNVDWENSALSSTSTMRGWETLPITVG HHHHHCCCCCCCCCCCHHCCCHHHCCCEEECEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12788972 [H]