| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is acoA [H]
Identifier: 158316487
GI number: 158316487
Start: 5636531
End: 5637529
Strand: Reverse
Name: acoA [H]
Synonym: Franean1_4722
Alternate gene names: 158316487
Gene position: 5637529-5636531 (Counterclockwise)
Preceding gene: 158316488
Following gene: 158316486
Centisome position: 62.76
GC content: 68.37
Gene sequence:
>999_bases ATGACGACGGATCGAACGGCGGGCATCTCGGGACAGGTGTGGCGCCGGTTATACGAGCTGATGACGCTCATGAAGGCGGC CGACGACCGGCTGAGCAGGGGGATCGCGTCGGGTGAGCTGCAGTGCGTGTACTGGCCTCCTCGTGGTCAGGAGGCGATTG CCGCGGCGATGGGGGTGTGTCTTCGGTCGGACGATCAGTTGGTCACGACCTATCGGGGGTTGCATGACCTGATCGGCAAG GGTGTGCCGTTGGTGGAGATCTACGGAGAGATGCTGGGCCGGCAGGTGGGATCGGGCCGGGGTAAGGGCGGGACGATGCA CATTGCCCGCCCCGACTCAGGCGTCATGTTGTCGACGGGGATTGTGGGATCCGGGCCGCCGGTCGCGGTGGGGATGGCCA TGGCGGCGCGGCGCAAGGGCCTGGATCGGGTGACGGCCGTGAGTTTCGGTGACGGGGCGACGAACACCGGCTCGTTTCAC GAGGCGGCGAACATGGCGGCGCTGTGGGATCTGCCGTTGGTGCTGGTGTGCCAGAACAACCAGTACGGCGAGATGACGCC AACTGAGCACACGATGAAGATCGCCCAGGTCGCGGACCGGGCGGGCGGGTACGGGATGCCGGGTGTCCGCGTCGACGGCA ACGACCCTCTCGCCGTCCTTGCCGTGTTGACGCAGGCCGTGGAGCGGGCGAGGAGCGGAGGGGGCCCGACGCTGGTGGAG TGCGTGACGTTCCGGTTCCGTGGTCACTACTTCGGGGATCCCATGGCGTACATCCCAGCCGAACGGATGGCCGCCGCTGT CGAGGCTGATCCGATCCCGCGGTTCCGGTCGCGCCTGCTGGAGACGGGGGTCTGCGATGAGCACGAGCTCGACGAGATCG AGGCGGCCGCCGTCGCGGCGGTCGAGGAGGCGTTGACCGCGGTCCTGGCGGCGCCGGTCGCGGCACTCGACGAGCTGGAT CGTGACGTGTACGCCGACCCGCGGAACTGCCCCGCCTAG
Upstream 100 bases:
>100_bases CGCGGCTCGTCACCCCGACAGACATGCACGAGGCTCCCGCCTCTCAGCCGCTTCGCGTGTCGCCGTCTGGCGGTGGTGCA CCGGTCGTAGGAGGAGGAAC
Downstream 100 bases:
>100_bases ACCCATATCCCGCTGGCGTCACGGTAAGAGCGGCTCCGGGCAATGCCGGCCTCGTGATGACTGTTCGCCTTCTCGATCAT TGGACCTGCATAGAGGTGGA
Product: pyruvate dehydrogenase
Products: [dihydrolipoyllysine-residue acetyltransferase] ; $S-acetyldihydrolipoyllysine; CO2
Alternate protein names: Acetoin:DCPIP oxidoreductase-alpha; Ao:DCPIP OR; TPP-dependent acetoin dehydrogenase E1 subunit alpha [H]
Number of amino acids: Translated: 332; Mature: 331
Protein sequence:
>332_residues MTTDRTAGISGQVWRRLYELMTLMKAADDRLSRGIASGELQCVYWPPRGQEAIAAAMGVCLRSDDQLVTTYRGLHDLIGK GVPLVEIYGEMLGRQVGSGRGKGGTMHIARPDSGVMLSTGIVGSGPPVAVGMAMAARRKGLDRVTAVSFGDGATNTGSFH EAANMAALWDLPLVLVCQNNQYGEMTPTEHTMKIAQVADRAGGYGMPGVRVDGNDPLAVLAVLTQAVERARSGGGPTLVE CVTFRFRGHYFGDPMAYIPAERMAAAVEADPIPRFRSRLLETGVCDEHELDEIEAAAVAAVEEALTAVLAAPVAALDELD RDVYADPRNCPA
Sequences:
>Translated_332_residues MTTDRTAGISGQVWRRLYELMTLMKAADDRLSRGIASGELQCVYWPPRGQEAIAAAMGVCLRSDDQLVTTYRGLHDLIGK GVPLVEIYGEMLGRQVGSGRGKGGTMHIARPDSGVMLSTGIVGSGPPVAVGMAMAARRKGLDRVTAVSFGDGATNTGSFH EAANMAALWDLPLVLVCQNNQYGEMTPTEHTMKIAQVADRAGGYGMPGVRVDGNDPLAVLAVLTQAVERARSGGGPTLVE CVTFRFRGHYFGDPMAYIPAERMAAAVEADPIPRFRSRLLETGVCDEHELDEIEAAAVAAVEEALTAVLAAPVAALDELD RDVYADPRNCPA >Mature_331_residues TTDRTAGISGQVWRRLYELMTLMKAADDRLSRGIASGELQCVYWPPRGQEAIAAAMGVCLRSDDQLVTTYRGLHDLIGKG VPLVEIYGEMLGRQVGSGRGKGGTMHIARPDSGVMLSTGIVGSGPPVAVGMAMAARRKGLDRVTAVSFGDGATNTGSFHE AANMAALWDLPLVLVCQNNQYGEMTPTEHTMKIAQVADRAGGYGMPGVRVDGNDPLAVLAVLTQAVERARSGGGPTLVEC VTFRFRGHYFGDPMAYIPAERMAAAVEADPIPRFRSRLLETGVCDEHELDEIEAAAVAAVEEALTAVLAAPVAALDELDR DVYADPRNCPA
Specific function: Catalyzes the 2,6-dichlorophenolindophenol-dependent cleavage of acetoin into acetate and acetaldehyde. The alpha subunit is probably the catalytic subunit of the enzyme [H]
COG id: COG1071
COG function: function code C; Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI4885543, Length=279, Percent_Identity=34.7670250896057, Blast_Score=163, Evalue=2e-40, Organism=Homo sapiens, GI291084742, Length=283, Percent_Identity=36.3957597173145, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI4505685, Length=283, Percent_Identity=36.3957597173145, Blast_Score=150, Evalue=2e-36, Organism=Homo sapiens, GI291084744, Length=288, Percent_Identity=35.7638888888889, Blast_Score=149, Evalue=3e-36, Organism=Homo sapiens, GI11386135, Length=314, Percent_Identity=29.6178343949045, Blast_Score=119, Evalue=3e-27, Organism=Homo sapiens, GI258645172, Length=314, Percent_Identity=29.6178343949045, Blast_Score=115, Evalue=4e-26, Organism=Homo sapiens, GI291084757, Length=283, Percent_Identity=32.1554770318021, Blast_Score=111, Evalue=1e-24, Organism=Caenorhabditis elegans, GI32564172, Length=288, Percent_Identity=36.1111111111111, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI17536047, Length=288, Percent_Identity=36.1111111111111, Blast_Score=159, Evalue=2e-39, Organism=Caenorhabditis elegans, GI86563357, Length=313, Percent_Identity=28.1150159744409, Blast_Score=115, Evalue=3e-26, Organism=Caenorhabditis elegans, GI86563355, Length=313, Percent_Identity=28.1150159744409, Blast_Score=115, Evalue=3e-26, Organism=Saccharomyces cerevisiae, GI6321026, Length=287, Percent_Identity=33.7979094076655, Blast_Score=154, Evalue=2e-38, Organism=Drosophila melanogaster, GI24639748, Length=279, Percent_Identity=36.5591397849462, Blast_Score=162, Evalue=4e-40, Organism=Drosophila melanogaster, GI24639746, Length=280, Percent_Identity=33.5714285714286, Blast_Score=144, Evalue=7e-35, Organism=Drosophila melanogaster, GI24639740, Length=280, Percent_Identity=33.5714285714286, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI24639744, Length=280, Percent_Identity=33.5714285714286, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI28571106, Length=280, Percent_Identity=33.5714285714286, Blast_Score=144, Evalue=1e-34, Organism=Drosophila melanogaster, GI21355903, Length=282, Percent_Identity=28.3687943262411, Blast_Score=98, Evalue=6e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001017 [H]
Pfam domain/function: PF00676 E1_dh [H]
EC number: 1.2.4.1
Molecular weight: Translated: 35288; Mature: 35157
Theoretical pI: Translated: 4.96; Mature: 4.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 4.5 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTDRTAGISGQVWRRLYELMTLMKAADDRLSRGIASGELQCVYWPPRGQEAIAAAMGVC CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH LRSDDQLVTTYRGLHDLIGKGVPLVEIYGEMLGRQVGSGRGKGGTMHIARPDSGVMLSTG HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECC IVGSGPPVAVGMAMAARRKGLDRVTAVSFGDGATNTGSFHEAANMAALWDLPLVLVCQNN CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCHHHHCCCCEEEEECCC QYGEMTPTEHTMKIAQVADRAGGYGMPGVRVDGNDPLAVLAVLTQAVERARSGGGPTLVE CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH CVTFRFRGHYFGDPMAYIPAERMAAAVEADPIPRFRSRLLETGVCDEHELDEIEAAAVAA HHHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH VEEALTAVLAAPVAALDELDRDVYADPRNCPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC >Mature Secondary Structure TTDRTAGISGQVWRRLYELMTLMKAADDRLSRGIASGELQCVYWPPRGQEAIAAAMGVC CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHH LRSDDQLVTTYRGLHDLIGKGVPLVEIYGEMLGRQVGSGRGKGGTMHIARPDSGVMLSTG HCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCEEEECC IVGSGPPVAVGMAMAARRKGLDRVTAVSFGDGATNTGSFHEAANMAALWDLPLVLVCQNN CCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHHHHCHHHHCCCCEEEEECCC QYGEMTPTEHTMKIAQVADRAGGYGMPGVRVDGNDPLAVLAVLTQAVERARSGGGPTLVE CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHH CVTFRFRGHYFGDPMAYIPAERMAAAVEADPIPRFRSRLLETGVCDEHELDEIEAAAVAA HHHHHHCCCCCCCCHHHCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHH VEEALTAVLAAPVAALDELDRDVYADPRNCPA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: pyruvate; [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine
Specific reaction: pyruvate + [dihydrolipoyllysine-residue acetyltransferase] lipoyllysine = [dihydrolipoyllysine-residue acetyltransferase] S- $acetyldihydrolipoyllysine + CO2
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969503; 10368162; 9384377 [H]