| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is cutM [H]
Identifier: 158316476
GI number: 158316476
Start: 5625899
End: 5626819
Strand: Reverse
Name: cutM [H]
Synonym: Franean1_4711
Alternate gene names: 158316476
Gene position: 5626819-5625899 (Counterclockwise)
Preceding gene: 158316477
Following gene: 158316475
Centisome position: 62.65
GC content: 72.53
Gene sequence:
>921_bases TTGAAAGCCGCTGCATTCGACTACCACGTGCCGGAGTCTGTTGACGCGGCGGTGGCCCTGCTGGCCGAGCTCGGAGACGA GGCGAAGGTCCTCGCCGGCGGCCAGAGCCTTGTTCCGGTGATGGCGATGCGGCTCGGGCGGCCCGAGCACATCGTCGACG TCAACCGCATCGAGGCGCTTGCCGGCGCCACCCGGTCGAACGGCATGCTGCGGGTGGGAGCGCTGACGCGGCACCGCGCT CTGGAGACCGACGTGCTCATTCGAGACTCGGTGCCGTTGTTGGCCCGTGCCGCGCCCCACATCGGCCATTTCCAGATCCG CAACCGTGGCACCGTGGGCGGCTCGCTCGCCCACGCCGACTCGGCCGCGGAGCTGCCCGCGGTCGCCGTCGCGCTCGACG CCGAGATCGAGGTGCAAAGCACCCGGGGGAGCCGGCGCATCCGGGCCGCCGACTTCTTCGTGTCGATCTTCATGACGGCG CTGGAGCCCGACGAGTTGGTGACCGCGGTGCACCTTCCGGTGTGGGGGCGTGGCTGCGGCTTCGCCGTGGCGGAGTTTGC GCGTCGGCACGGCGACTTCGCGCTGGCCGGTGCCGCGTGTGGGGTGCAGGTCGATGGCGGGCGCATCGTACGGGCGGCGG TCGGGCTGATCGGGATGGGCAGCGTTCCGGTGCGGGCCCGGCTGGCCGAGCAGACCCTGACCGGTGCGGACGCCCACGAG GTGGACCTCGCCTCGATCGGGCGCGACGCGGTCGCGGCACTCGACCCGCCCTCGGACACCCACGGCTCCGCCGCTTACCG GCGCCACCTCGGCGCTCAGATGACTGCGCGAGCACTTGGCCGGGCCCTCGCGGAGGCCCAGGGACAGGAACGGAACCCAG GCCAGAGCCAGGCCCAGGCCGAGGCGGGAGGCACCGCATGA
Upstream 100 bases:
>100_bases GACAACCGGTGCGACGGCGGGACTCCCGTGTCGCTGGCCCTGATCCCCTGGGGGACGCCGCGCCGGCGTCCGCCGGGTTG GACGAGACGGAGAACCGCCG
Downstream 100 bases:
>100_bases CCGAGATGGATGTGAACCTGATCGTGAACGGCGAACGCTGTCGCGCCCGGGTCGAGCCGCGCAAGACTCTCGCCGACCTG CTGCGGGAGGACCTCGGGCT
Product: FAD-binding molybdopterin dehydrogenase
Products: NA
Alternate protein names: CO dehydrogenase subunit M; CO-DH M [H]
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MKAAAFDYHVPESVDAAVALLAELGDEAKVLAGGQSLVPVMAMRLGRPEHIVDVNRIEALAGATRSNGMLRVGALTRHRA LETDVLIRDSVPLLARAAPHIGHFQIRNRGTVGGSLAHADSAAELPAVAVALDAEIEVQSTRGSRRIRAADFFVSIFMTA LEPDELVTAVHLPVWGRGCGFAVAEFARRHGDFALAGAACGVQVDGGRIVRAAVGLIGMGSVPVRARLAEQTLTGADAHE VDLASIGRDAVAALDPPSDTHGSAAYRRHLGAQMTARALGRALAEAQGQERNPGQSQAQAEAGGTA
Sequences:
>Translated_306_residues MKAAAFDYHVPESVDAAVALLAELGDEAKVLAGGQSLVPVMAMRLGRPEHIVDVNRIEALAGATRSNGMLRVGALTRHRA LETDVLIRDSVPLLARAAPHIGHFQIRNRGTVGGSLAHADSAAELPAVAVALDAEIEVQSTRGSRRIRAADFFVSIFMTA LEPDELVTAVHLPVWGRGCGFAVAEFARRHGDFALAGAACGVQVDGGRIVRAAVGLIGMGSVPVRARLAEQTLTGADAHE VDLASIGRDAVAALDPPSDTHGSAAYRRHLGAQMTARALGRALAEAQGQERNPGQSQAQAEAGGTA >Mature_306_residues MKAAAFDYHVPESVDAAVALLAELGDEAKVLAGGQSLVPVMAMRLGRPEHIVDVNRIEALAGATRSNGMLRVGALTRHRA LETDVLIRDSVPLLARAAPHIGHFQIRNRGTVGGSLAHADSAAELPAVAVALDAEIEVQSTRGSRRIRAADFFVSIFMTA LEPDELVTAVHLPVWGRGCGFAVAEFARRHGDFALAGAACGVQVDGGRIVRAAVGLIGMGSVPVRARLAEQTLTGADAHE VDLASIGRDAVAALDPPSDTHGSAAYRRHLGAQMTARALGRALAEAQGQERNPGQSQAQAEAGGTA
Specific function: Catalyzes the oxidation of carbon monoxide to carbon dioxide [H]
COG id: COG1319
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 FAD-binding PCMH-type domain [H]
Homologues:
Organism=Escherichia coli, GI1789231, Length=287, Percent_Identity=30.6620209059233, Blast_Score=110, Evalue=1e-25,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005107 - InterPro: IPR016169 - InterPro: IPR016166 - InterPro: IPR016167 - InterPro: IPR002346 [H]
Pfam domain/function: PF03450 CO_deh_flav_C; PF00941 FAD_binding_5 [H]
EC number: =1.2.99.2 [H]
Molecular weight: Translated: 31794; Mature: 31794
Theoretical pI: Translated: 6.75; Mature: 6.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAAAFDYHVPESVDAAVALLAELGDEAKVLAGGQSLVPVMAMRLGRPEHIVDVNRIEAL CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHEECHHHHHHH AGATRSNGMLRVGALTRHRALETDVLIRDSVPLLARAAPHIGHFQIRNRGTVGGSLAHAD HCCCCCCCEEEECCHHHHHHHCCCEEEECCCCHHHHCCCCCCEEEECCCCCCCCCHHCCC SAAELPAVAVALDAEIEVQSTRGSRRIRAADFFVSIFMTALEPDELVTAVHLPVWGRGCG CCCCCCEEEEEECCEEEEECCCCCCEEHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCC FAVAEFARRHGDFALAGAACGVQVDGGRIVRAAVGLIGMGSVPVRARLAEQTLTGADAHE HHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC VDLASIGRDAVAALDPPSDTHGSAAYRRHLGAQMTARALGRALAEAQGQERNPGQSQAQA CHHHHCCCCCEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EAGGTA CCCCCC >Mature Secondary Structure MKAAAFDYHVPESVDAAVALLAELGDEAKVLAGGQSLVPVMAMRLGRPEHIVDVNRIEAL CCCCCCCCCCCCHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHCCCCHHEECHHHHHHH AGATRSNGMLRVGALTRHRALETDVLIRDSVPLLARAAPHIGHFQIRNRGTVGGSLAHAD HCCCCCCCEEEECCHHHHHHHCCCEEEECCCCHHHHCCCCCCEEEECCCCCCCCCHHCCC SAAELPAVAVALDAEIEVQSTRGSRRIRAADFFVSIFMTALEPDELVTAVHLPVWGRGCG CCCCCCEEEEEECCEEEEECCCCCCEEHHHHHHHHHHHHHCCHHHHEEEEECCCCCCCCC FAVAEFARRHGDFALAGAACGVQVDGGRIVRAAVGLIGMGSVPVRARLAEQTLTGADAHE HHHHHHHHHCCCEEEECCCCCEEECCCCHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCC VDLASIGRDAVAALDPPSDTHGSAAYRRHLGAQMTARALGRALAEAQGQERNPGQSQAQA CHHHHCCCCCEEECCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHCCCCCCCCHHHHHH EAGGTA CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10482497; 2818128; 10966817; 11076018 [H]