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The map label for this gene is 158316438

Identifier: 158316438

GI number: 158316438

Start: 5581632

End: 5582798

Strand: Reverse

Name: 158316438

Synonym: Franean1_4673

Alternate gene names: NA

Gene position: 5582798-5581632 (Counterclockwise)

Preceding gene: 158316439

Following gene: 158316437

Centisome position: 62.16

GC content: 70.27

Gene sequence:

>1167_bases
ATGCGGGCATTCAGCCAGACGACAGAGGACCTCGCTCGGCAGGAGATCGAGCTGCCCTCGTGGGCGTTCGGGAACTCCGG
GACGCGCTTCAAGGTGTTCACGCAGCGTGGCATCCCGCGTGATCCGTTCGAGAAGGTCGCCGACGCGGCGCAGGTGCACC
GGTTGACCGGGCTCGCGCCGTCGGTCGCGCTGCACATCCCCTGGGACGTCGTCGACGACTTCGACAAGCTGGGCGAACAC
GCGCGGGCCAACGGCGTCCGGCTCGGGACGATCAACACGAACACGTTCCAGGACGACGACTACCTGCTCGGCAGCCTCTG
TCACGTCGACGAGCGCGTCCGGGCGAAGGCGGTCAGGCACGCCCTCGACTGCGTCGACATCATGGACGCGACGGGCAGCC
GCGACCTGAAGATCTGGCTGCCCGACGGGCTGAACTACCCCGGCCAGGCCGACCTGCGCGACCGGCAGGAGCGGCTCGCC
GACGCCCTGGGCCAGATCTACGCCCGGCTGGCGGCGCACCAGCGGCTCGTGCTCGAGTACAAGCTGTTCGAGCCGGCCTT
CTACGCCACCGACGTCCCCGACTGGGGCACGGCCTACGTCCACTGCCTCGCGCTCGGGGAACGTGCCGTGGTGTGTCTGG
ACACCGGCCACCACGCCCCGCACACCAACATCGAGTTCATCGTGATGCAGCTGCTCCGGCTGGGGCGGCTGGGGGCGTTC
GACTTCAACTCCCGCTTCTACGCCGACGACGACCTGATCGTCGGCGCCGCTGACCCCTTCCAGCTGTTCCGGATCATGAC
CGAGGTCGTCCGGGGCGGTGGCTACGACGAGGGCAGCGAGGTGACCTTCATGCTCGACCAGTGCCACAACATCGAGGCGA
AGATCCCGGGCCAGATCCGGTCCGTGCTCAACGTGCAGGAGATGACGGCCCGCGCGCTGCTCGTCGACCGGGCGGCGCTC
GCCGAGGCTGAGCGCGCCGGGGACGTGCTGGCCGCGAACGCGGTCCTCATGGACGCCTTCTACACCGACGTGCGCGCAGA
CCTCGCCGCCTGGCGTGAGTCGCGCGGGCTGCCCGCCGACCCCCTGGCGGCCTTCCAGTCCAGCGGTTACGCCGAGCGCG
TCGCGGCCGAGCGGGTCGGTGGCACCCAGGCCGGGTGGGGCGCGTGA

Upstream 100 bases:

>100_bases
TGCCTTCTCGGTTCGCGATTGCCGACCGTGCGAGATTGTGTGACAATTTACAAGATCTCACAGAAGCCGGAAGGGCTGGC
AGCTGGAAGGGCTGGCGACG

Downstream 100 bases:

>100_bases
GCGGGAACCAGACCGTCGCCGAGCTCCTCGCCCGGTCGAACCGGCTCGGCGCCGACCCGCGCAACACCAACTACGCGGGC
GGCAACACCTCCGCCAAGGG

Product: L-rhamnose isomerase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 388

Protein sequence:

>388_residues
MRAFSQTTEDLARQEIELPSWAFGNSGTRFKVFTQRGIPRDPFEKVADAAQVHRLTGLAPSVALHIPWDVVDDFDKLGEH
ARANGVRLGTINTNTFQDDDYLLGSLCHVDERVRAKAVRHALDCVDIMDATGSRDLKIWLPDGLNYPGQADLRDRQERLA
DALGQIYARLAAHQRLVLEYKLFEPAFYATDVPDWGTAYVHCLALGERAVVCLDTGHHAPHTNIEFIVMQLLRLGRLGAF
DFNSRFYADDDLIVGAADPFQLFRIMTEVVRGGGYDEGSEVTFMLDQCHNIEAKIPGQIRSVLNVQEMTARALLVDRAAL
AEAERAGDVLAANAVLMDAFYTDVRADLAAWRESRGLPADPLAAFQSSGYAERVAAERVGGTQAGWGA

Sequences:

>Translated_388_residues
MRAFSQTTEDLARQEIELPSWAFGNSGTRFKVFTQRGIPRDPFEKVADAAQVHRLTGLAPSVALHIPWDVVDDFDKLGEH
ARANGVRLGTINTNTFQDDDYLLGSLCHVDERVRAKAVRHALDCVDIMDATGSRDLKIWLPDGLNYPGQADLRDRQERLA
DALGQIYARLAAHQRLVLEYKLFEPAFYATDVPDWGTAYVHCLALGERAVVCLDTGHHAPHTNIEFIVMQLLRLGRLGAF
DFNSRFYADDDLIVGAADPFQLFRIMTEVVRGGGYDEGSEVTFMLDQCHNIEAKIPGQIRSVLNVQEMTARALLVDRAAL
AEAERAGDVLAANAVLMDAFYTDVRADLAAWRESRGLPADPLAAFQSSGYAERVAAERVGGTQAGWGA
>Mature_388_residues
MRAFSQTTEDLARQEIELPSWAFGNSGTRFKVFTQRGIPRDPFEKVADAAQVHRLTGLAPSVALHIPWDVVDDFDKLGEH
ARANGVRLGTINTNTFQDDDYLLGSLCHVDERVRAKAVRHALDCVDIMDATGSRDLKIWLPDGLNYPGQADLRDRQERLA
DALGQIYARLAAHQRLVLEYKLFEPAFYATDVPDWGTAYVHCLALGERAVVCLDTGHHAPHTNIEFIVMQLLRLGRLGAF
DFNSRFYADDDLIVGAADPFQLFRIMTEVVRGGGYDEGSEVTFMLDQCHNIEAKIPGQIRSVLNVQEMTARALLVDRAAL
AEAERAGDVLAANAVLMDAFYTDVRADLAAWRESRGLPADPLAAFQSSGYAERVAAERVGGTQAGWGA

Specific function: Unknown

COG id: COG4952

COG function: function code M; Predicted sugar isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rhamnose isomerase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013451
- InterPro:   IPR013022
- InterPro:   IPR012307 [H]

Pfam domain/function: PF01261 AP_endonuc_2 [H]

EC number: NA

Molecular weight: Translated: 42874; Mature: 42874

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAFSQTTEDLARQEIELPSWAFGNSGTRFKVFTQRGIPRDPFEKVADAAQVHRLTGLAP
CCCHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
SVALHIPWDVVDDFDKLGEHARANGVRLGTINTNTFQDDDYLLGSLCHVDERVRAKAVRH
CEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALDCVDIMDATGSRDLKIWLPDGLNYPGQADLRDRQERLADALGQIYARLAAHQRLVLEY
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
KLFEPAFYATDVPDWGTAYVHCLALGERAVVCLDTGHHAPHTNIEFIVMQLLRLGRLGAF
ECCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
DFNSRFYADDDLIVGAADPFQLFRIMTEVVRGGGYDEGSEVTFMLDQCHNIEAKIPGQIR
CCCCEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHH
SVLNVQEMTARALLVDRAALAEAERAGDVLAANAVLMDAFYTDVRADLAAWRESRGLPAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PLAAFQSSGYAERVAAERVGGTQAGWGA
HHHHHHCCCHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MRAFSQTTEDLARQEIELPSWAFGNSGTRFKVFTQRGIPRDPFEKVADAAQVHRLTGLAP
CCCHHHHHHHHHHHHCCCCCEECCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHHCCCC
SVALHIPWDVVDDFDKLGEHARANGVRLGTINTNTFQDDDYLLGSLCHVDERVRAKAVRH
CEEEECCHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHH
ALDCVDIMDATGSRDLKIWLPDGLNYPGQADLRDRQERLADALGQIYARLAAHQRLVLEY
HHHHHHHHHCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEE
KLFEPAFYATDVPDWGTAYVHCLALGERAVVCLDTGHHAPHTNIEFIVMQLLRLGRLGAF
ECCCCCEEECCCCCCHHHHHHHHHHCCCEEEEEECCCCCCCCCHHHHHHHHHHHCCCCCC
DFNSRFYADDDLIVGAADPFQLFRIMTEVVRGGGYDEGSEVTFMLDQCHNIEAKIPGQIR
CCCCEEECCCCEEEECCCHHHHHHHHHHHHHCCCCCCCCCEEEEEECCCCCCCCCCHHHH
SVLNVQEMTARALLVDRAALAEAERAGDVLAANAVLMDAFYTDVRADLAAWRESRGLPAD
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PLAAFQSSGYAERVAAERVGGTQAGWGA
HHHHHHCCCHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]