| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316411
Identifier: 158316411
GI number: 158316411
Start: 5543801
End: 5544211
Strand: Reverse
Name: 158316411
Synonym: Franean1_4645
Alternate gene names: NA
Gene position: 5544211-5543801 (Counterclockwise)
Preceding gene: 158316412
Following gene: 158316410
Centisome position: 61.73
GC content: 69.1
Gene sequence:
>411_bases ATGAAGGACCTGTTGGAACAGATCGAAGCCCGGCGGATCCGAGCCGGGCGGACCATGGAACGGCTACAGGCCGAGATTGC CGCGCTCACCGAGCAGCTCGTCGCCGCCGAACGCGACCCGCAGCGCCTCGACATCACCCGCGAGACGCTGCTGGAACTGT CCACCGAGGACAACGCCGCACCGGTCGAGATGCCGCCGGGCTACCGCGAGGTCGTGGCCCTGTTCGCACACGACGGGAAC GGGCTACGCGCCAAGGAGGCCTGCCGGGCCCTGGGCACCGGCACCGAACCCCGCCATGTCGAGAGCATGCGCGCGAAGCT GAAACGCCTCGTCGACCGCGGCGTGCTCTCCGAACCCGATCCCGGCCTGTTCGTCCTGCCGCGACCCACCCCAGAGATCA ACCCAAGCTGA
Upstream 100 bases:
>100_bases CCCCAGGTCGGGCGGCACCCGCGCCGGGGGGACAAGCCCTCCGAGTGGCGCGACCCACCGACCTGACCGCGATGGGCCGG CGCGAGAGGCGGGAGTGGTG
Downstream 100 bases:
>100_bases GACCCGACGAAAACTTACAGAACACCCACTGACTCCCGGTGAGGTGACAGAGCTGCGGCCCCTATCTTCGCAACCCGGTG ATCGGCGGTCAGACCGCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAAPVEMPPGYREVVALFAHDGN GLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPDPGLFVLPRPTPEINPS
Sequences:
>Translated_136_residues MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAAPVEMPPGYREVVALFAHDGN GLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPDPGLFVLPRPTPEINPS >Mature_136_residues MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAAPVEMPPGYREVVALFAHDGN GLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPDPGLFVLPRPTPEINPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15147; Mature: 15147
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAA CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC PVEMPPGYREVVALFAHDGNGLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPD CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PGLFVLPRPTPEINPS CCEEEECCCCCCCCCC >Mature Secondary Structure MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAA CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC PVEMPPGYREVVALFAHDGNGLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPD CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC PGLFVLPRPTPEINPS CCEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA