Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316411

Identifier: 158316411

GI number: 158316411

Start: 5543801

End: 5544211

Strand: Reverse

Name: 158316411

Synonym: Franean1_4645

Alternate gene names: NA

Gene position: 5544211-5543801 (Counterclockwise)

Preceding gene: 158316412

Following gene: 158316410

Centisome position: 61.73

GC content: 69.1

Gene sequence:

>411_bases
ATGAAGGACCTGTTGGAACAGATCGAAGCCCGGCGGATCCGAGCCGGGCGGACCATGGAACGGCTACAGGCCGAGATTGC
CGCGCTCACCGAGCAGCTCGTCGCCGCCGAACGCGACCCGCAGCGCCTCGACATCACCCGCGAGACGCTGCTGGAACTGT
CCACCGAGGACAACGCCGCACCGGTCGAGATGCCGCCGGGCTACCGCGAGGTCGTGGCCCTGTTCGCACACGACGGGAAC
GGGCTACGCGCCAAGGAGGCCTGCCGGGCCCTGGGCACCGGCACCGAACCCCGCCATGTCGAGAGCATGCGCGCGAAGCT
GAAACGCCTCGTCGACCGCGGCGTGCTCTCCGAACCCGATCCCGGCCTGTTCGTCCTGCCGCGACCCACCCCAGAGATCA
ACCCAAGCTGA

Upstream 100 bases:

>100_bases
CCCCAGGTCGGGCGGCACCCGCGCCGGGGGGACAAGCCCTCCGAGTGGCGCGACCCACCGACCTGACCGCGATGGGCCGG
CGCGAGAGGCGGGAGTGGTG

Downstream 100 bases:

>100_bases
GACCCGACGAAAACTTACAGAACACCCACTGACTCCCGGTGAGGTGACAGAGCTGCGGCCCCTATCTTCGCAACCCGGTG
ATCGGCGGTCAGACCGCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 136; Mature: 136

Protein sequence:

>136_residues
MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAAPVEMPPGYREVVALFAHDGN
GLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPDPGLFVLPRPTPEINPS

Sequences:

>Translated_136_residues
MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAAPVEMPPGYREVVALFAHDGN
GLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPDPGLFVLPRPTPEINPS
>Mature_136_residues
MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAAPVEMPPGYREVVALFAHDGN
GLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPDPGLFVLPRPTPEINPS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15147; Mature: 15147

Theoretical pI: Translated: 5.34; Mature: 5.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAA
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PVEMPPGYREVVALFAHDGNGLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPD
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PGLFVLPRPTPEINPS
CCEEEECCCCCCCCCC
>Mature Secondary Structure
MKDLLEQIEARRIRAGRTMERLQAEIAALTEQLVAAERDPQRLDITRETLLELSTEDNAA
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCC
PVEMPPGYREVVALFAHDGNGLRAKEACRALGTGTEPRHVESMRAKLKRLVDRGVLSEPD
CCCCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCC
PGLFVLPRPTPEINPS
CCEEEECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA