Click here to switch to the map view.

The map label for this gene is 158316399

Identifier: 158316399

GI number: 158316399

Start: 5526534

End: 5526995

Strand: Reverse

Name: 158316399

Synonym: Franean1_4633

Alternate gene names: NA

Gene position: 5526995-5526534 (Counterclockwise)

Preceding gene: 158316400

Following gene: 158316398

Centisome position: 61.53

GC content: 68.61

Gene sequence:

>462_bases
GTGACCGGCGTGACCGATGTGACCGACGCGGATGTCTTCGCCGCGTTCCCCGCGGTGCTGATCGACCGCGACAACATCGA
GCATTACCGCGGGCTGCTCCAGCAGCGGCTGCTGATCAATCGTTGCTCGGCCTGCGGCTACTGGGTGTACCCACACCGCC
CGCTGTGCCCGAAGTGCTGGTCGTGGGACGTCGTGCCCACCGAGGTGAGCGGCGAGGGCTCCGTGTTCCTGTGCACGCTG
ATCCACCAGGAGCGGGATCCGAACGCCGCACTGTCGGAGCCGGTGCCGGCCGCCGCCGTGGAGCTTGTCGAGCAGTCGGG
GTTGCGTTATCTGGCGCCGATCGTGAACTGCCCGCTCGAGGCGATCCGGCTCGACATGCCGGTGCGCCTGACGTGGGTGG
ATCGCGACGGGCTGGCGTGGCCGGCGTTCGAACCGGCGGTCCCGATCGAGGACAGGAGATAG

Upstream 100 bases:

>100_bases
TTCCCAGGGACATCGTGTTTCTCGACGAGCTTCCGCGGTTGGCCAACGGGAAGCTCGACCGGGTCGGCCTGGCCGGACGG
GCCAAGGAAGAGGTGACGGC

Downstream 100 bases:

>100_bases
CAATGGCGCGCAACCCGTTGAAGGACAGCCTGGCCGTGGTGGGTGTCGGGTCGACGCCCTACGGCCGTGACCTGAAACGC
ACCGAGCTGTCGCTCGCCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MTGVTDVTDADVFAAFPAVLIDRDNIEHYRGLLQQRLLINRCSACGYWVYPHRPLCPKCWSWDVVPTEVSGEGSVFLCTL
IHQERDPNAALSEPVPAAAVELVEQSGLRYLAPIVNCPLEAIRLDMPVRLTWVDRDGLAWPAFEPAVPIEDRR

Sequences:

>Translated_153_residues
MTGVTDVTDADVFAAFPAVLIDRDNIEHYRGLLQQRLLINRCSACGYWVYPHRPLCPKCWSWDVVPTEVSGEGSVFLCTL
IHQERDPNAALSEPVPAAAVELVEQSGLRYLAPIVNCPLEAIRLDMPVRLTWVDRDGLAWPAFEPAVPIEDRR
>Mature_152_residues
TGVTDVTDADVFAAFPAVLIDRDNIEHYRGLLQQRLLINRCSACGYWVYPHRPLCPKCWSWDVVPTEVSGEGSVFLCTLI
HQERDPNAALSEPVPAAAVELVEQSGLRYLAPIVNCPLEAIRLDMPVRLTWVDRDGLAWPAFEPAVPIEDRR

Specific function: Unknown

COG id: COG1545

COG function: function code R; Predicted nucleic-acid-binding protein containing a Zn-ribbon

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17155; Mature: 17024

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGVTDVTDADVFAAFPAVLIDRDNIEHYRGLLQQRLLINRCSACGYWVYPHRPLCPKCW
CCCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
SWDVVPTEVSGEGSVFLCTLIHQERDPNAALSEPVPAAAVELVEQSGLRYLAPIVNCPLE
CCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHCCHH
AIRLDMPVRLTWVDRDGLAWPAFEPAVPIEDRR
HEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TGVTDVTDADVFAAFPAVLIDRDNIEHYRGLLQQRLLINRCSACGYWVYPHRPLCPKCW
CCCCCCCCCHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCC
SWDVVPTEVSGEGSVFLCTLIHQERDPNAALSEPVPAAAVELVEQSGLRYLAPIVNCPLE
CCCCCCCEECCCCCEEEEEEEECCCCCCCCCCCCCCHHHHHHHHHCCCEEEHHHHHCCHH
AIRLDMPVRLTWVDRDGLAWPAFEPAVPIEDRR
HEECCCCEEEEEECCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA