| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316398
Identifier: 158316398
GI number: 158316398
Start: 5525323
End: 5526531
Strand: Reverse
Name: 158316398
Synonym: Franean1_4632
Alternate gene names: NA
Gene position: 5526531-5525323 (Counterclockwise)
Preceding gene: 158316399
Following gene: 158316396
Centisome position: 61.53
GC content: 67.08
Gene sequence:
>1209_bases ATGGCGCGCAACCCGTTGAAGGACAGCCTGGCCGTGGTGGGTGTCGGGTCGACGCCCTACGGCCGTGACCTGAAACGCAC CGAGCTGTCGCTCGCCCTTGAGGCGGCCGTCGGCGCCATCGAGGACGCCGGTATCGACCGGCAGGAGATCGACGGTGTCT GCGGCACGGGCATGGACCCGCTGTCCATGGGCGGAGCCGGGTTCCTGACGCTGCAGGGCGCGCTCGGGATCGAGAAGACC ACCTGGCAGAAGAACGGGTGGCTCGGATCATGCTTCGTCTATGCAGCCGAAGCGGTGTTCTCCGGCCTGTGCGACGCGGT CCTGGTGGTACAGGCCTACACCCGCAGACCCGAGATGTCGCGGTCCGCCGCGAACGACCCGTTCCGCCTCCGGGCGGCGC AACTGCGCGCGGCGAGCCACGCGCCCATAGGCCGGGACGACTTCGCTCGCCGCTGGCTGCACTCCGGTGAGCCGTATGCC GCCTGGATGGCGCGCTACCTGCATGACTACGGAGCGACGAAGGACGTCTTCGCCCGCATTGCCGTGAACAACCGCACCCA CGCGACGAAGAACCCCAATGCAGCCATGCGAACCCCGATCACGATGGAGGACTACCACGCCTCTCGCGTGATCTGGGAGC CCATGCAGATGCTCGACATGGACGTGCCCGTCGACTGCGCGGAAGCTCTGATCATCACGACCGCCGAACGGGCAATGGAT CTGCGCCACAAGCCTGTGTACATCCACGCCATGTCGCTGGGCGGTTCACGGGTCGGGGAGTACTACGACAACAGCCTGGG CTGGACCGAGAACGCTCTGTGGACCTCCCTGGCCGGCCTCTGGGAGCGCAGCGACCTGACCGTCAACGACCTCGACCTCT TCTTCCCTTACGACGGCTACACCATCGACACCGTGGGGTGCATCGAGGCGGCCGGGTTCTGCAAGCCGGGCGAGGCCGGC GACCTGCTCGCATCGTCGTGGGACGCCCAGGCGAACATCCTTCGCCTCGGCGGACACACACTCGTCACAACCAATGGGGG TGGGCTGTCGCAAGGACGGGCGGGGGGCTTCAACTTCTACACCGAGGCGGTACGACAGCTGCGGGGCACCGAGGGTGAAC GTCAGGTTCCCGGTGCCAGGACGGCGCTGCTCTGCCCCGGCGCCAGCTTCTTCCACGACCCGGCGTCGATCATGTTGCGC ACAGACTGA
Upstream 100 bases:
>100_bases TCCGGCTCGACATGCCGGTGCGCCTGACGTGGGTGGATCGCGACGGGCTGGCGTGGCCGGCGTTCGAACCGGCGGTCCCG ATCGAGGACAGGAGATAGCA
Downstream 100 bases:
>100_bases GCGACGGAGCACAGCAGGGAAACGGAGCACAGCGATGGAGACCCGCACGCTCGTCAGCTTCGACATTGACGGAACCCTGG AGACGGGCGACCCGGCCGGG
Product: acetyl-CoA acetyltransferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 402; Mature: 401
Protein sequence:
>402_residues MARNPLKDSLAVVGVGSTPYGRDLKRTELSLALEAAVGAIEDAGIDRQEIDGVCGTGMDPLSMGGAGFLTLQGALGIEKT TWQKNGWLGSCFVYAAEAVFSGLCDAVLVVQAYTRRPEMSRSAANDPFRLRAAQLRAASHAPIGRDDFARRWLHSGEPYA AWMARYLHDYGATKDVFARIAVNNRTHATKNPNAAMRTPITMEDYHASRVIWEPMQMLDMDVPVDCAEALIITTAERAMD LRHKPVYIHAMSLGGSRVGEYYDNSLGWTENALWTSLAGLWERSDLTVNDLDLFFPYDGYTIDTVGCIEAAGFCKPGEAG DLLASSWDAQANILRLGGHTLVTTNGGGLSQGRAGGFNFYTEAVRQLRGTEGERQVPGARTALLCPGASFFHDPASIMLR TD
Sequences:
>Translated_402_residues MARNPLKDSLAVVGVGSTPYGRDLKRTELSLALEAAVGAIEDAGIDRQEIDGVCGTGMDPLSMGGAGFLTLQGALGIEKT TWQKNGWLGSCFVYAAEAVFSGLCDAVLVVQAYTRRPEMSRSAANDPFRLRAAQLRAASHAPIGRDDFARRWLHSGEPYA AWMARYLHDYGATKDVFARIAVNNRTHATKNPNAAMRTPITMEDYHASRVIWEPMQMLDMDVPVDCAEALIITTAERAMD LRHKPVYIHAMSLGGSRVGEYYDNSLGWTENALWTSLAGLWERSDLTVNDLDLFFPYDGYTIDTVGCIEAAGFCKPGEAG DLLASSWDAQANILRLGGHTLVTTNGGGLSQGRAGGFNFYTEAVRQLRGTEGERQVPGARTALLCPGASFFHDPASIMLR TD >Mature_401_residues ARNPLKDSLAVVGVGSTPYGRDLKRTELSLALEAAVGAIEDAGIDRQEIDGVCGTGMDPLSMGGAGFLTLQGALGIEKTT WQKNGWLGSCFVYAAEAVFSGLCDAVLVVQAYTRRPEMSRSAANDPFRLRAAQLRAASHAPIGRDDFARRWLHSGEPYAA WMARYLHDYGATKDVFARIAVNNRTHATKNPNAAMRTPITMEDYHASRVIWEPMQMLDMDVPVDCAEALIITTAERAMDL RHKPVYIHAMSLGGSRVGEYYDNSLGWTENALWTSLAGLWERSDLTVNDLDLFFPYDGYTIDTVGCIEAAGFCKPGEAGD LLASSWDAQANILRLGGHTLVTTNGGGLSQGRAGGFNFYTEAVRQLRGTEGERQVPGARTALLCPGASFFHDPASIMLRT D
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI19923233, Length=388, Percent_Identity=25.7731958762887, Blast_Score=83, Evalue=4e-16, Organism=Homo sapiens, GI302344760, Length=323, Percent_Identity=24.7678018575851, Blast_Score=72, Evalue=1e-12, Organism=Homo sapiens, GI302344762, Length=250, Percent_Identity=26.8, Blast_Score=71, Evalue=2e-12, Organism=Homo sapiens, GI302344767, Length=250, Percent_Identity=26.8, Blast_Score=71, Evalue=2e-12, Organism=Caenorhabditis elegans, GI17537653, Length=229, Percent_Identity=25.3275109170306, Blast_Score=79, Evalue=4e-15, Organism=Drosophila melanogaster, GI24585051, Length=401, Percent_Identity=26.1845386533666, Blast_Score=84, Evalue=2e-16, Organism=Drosophila melanogaster, GI19921506, Length=398, Percent_Identity=25.6281407035176, Blast_Score=81, Evalue=1e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002155 - InterPro: IPR016039 - InterPro: IPR016038 - InterPro: IPR020617 - InterPro: IPR020616 [H]
Pfam domain/function: PF02803 Thiolase_C; PF00108 Thiolase_N [H]
EC number: NA
Molecular weight: Translated: 43651; Mature: 43520
Theoretical pI: Translated: 5.42; Mature: 5.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARNPLKDSLAVVGVGSTPYGRDLKRTELSLALEAAVGAIEDAGIDRQEIDGVCGTGMDP CCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC LSMGGAGFLTLQGALGIEKTTWQKNGWLGSCFVYAAEAVFSGLCDAVLVVQAYTRRPEMS HHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RSAANDPFRLRAAQLRAASHAPIGRDDFARRWLHSGEPYAAWMARYLHDYGATKDVFARI HHCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEE AVNNRTHATKNPNAAMRTPITMEDYHASRVIWEPMQMLDMDVPVDCAEALIITTAERAMD EECCCCCCCCCCCCHHCCCCCHHCCCCCHHHHCCHHHHCCCCCHHHHHHEEEEEHHHHHH LRHKPVYIHAMSLGGSRVGEYYDNSLGWTENALWTSLAGLWERSDLTVNDLDLFFPYDGY CCCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECEEEEECCCCE TIDTVGCIEAAGFCKPGEAGDLLASSWDAQANILRLGGHTLVTTNGGGLSQGRAGGFNFY EECCHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCHHHH TEAVRQLRGTEGERQVPGARTALLCPGASFFHDPASIMLRTD HHHHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEECC >Mature Secondary Structure ARNPLKDSLAVVGVGSTPYGRDLKRTELSLALEAAVGAIEDAGIDRQEIDGVCGTGMDP CCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCC LSMGGAGFLTLQGALGIEKTTWQKNGWLGSCFVYAAEAVFSGLCDAVLVVQAYTRRPEMS HHCCCCEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH RSAANDPFRLRAAQLRAASHAPIGRDDFARRWLHSGEPYAAWMARYLHDYGATKDVFARI HHCCCCCCEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHEEE AVNNRTHATKNPNAAMRTPITMEDYHASRVIWEPMQMLDMDVPVDCAEALIITTAERAMD EECCCCCCCCCCCCHHCCCCCHHCCCCCHHHHCCHHHHCCCCCHHHHHHEEEEEHHHHHH LRHKPVYIHAMSLGGSRVGEYYDNSLGWTENALWTSLAGLWERSDLTVNDLDLFFPYDGY CCCCCEEEEEEECCCCHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCEEECEEEEECCCCE TIDTVGCIEAAGFCKPGEAGDLLASSWDAQANILRLGGHTLVTTNGGGLSQGRAGGFNFY EECCHHHHHHCCCCCCCCCCCHHHCCCCCCCEEEEECCEEEEEECCCCCCCCCCCCHHHH TEAVRQLRGTEGERQVPGARTALLCPGASFFHDPASIMLRTD HHHHHHHHCCCCCCCCCCCCEEEECCCCHHHCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]