| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316341
Identifier: 158316341
GI number: 158316341
Start: 5452854
End: 5453942
Strand: Reverse
Name: 158316341
Synonym: Franean1_4570
Alternate gene names: NA
Gene position: 5453942-5452854 (Counterclockwise)
Preceding gene: 158316342
Following gene: 158316340
Centisome position: 60.72
GC content: 74.66
Gene sequence:
>1089_bases ATGGCAGATCACCAGGCCGGCACGGCTCACCCGGCTGACGTCGCCCGCCAGGCCGACGTCGCTCACCCGGCCGAACCAGC CCTGACCGCCGACCTGGCGAGGCGGCTGGCGGACCGGCTGCCGCAGTGGCGTGGCGAGTCGCGGGTCGGCGAGGTCCGCC CGCTGACCGGCGGCACGTCGAGTCTGACGTTCCTCGTCGACGTGGCCGGCGTGCCGGCGGCGGAGTCCCCGATCGTGGTC AAGCTCGCGCCGCCCGGCCTGGCGCCGGTCCGCAACCGCGACGTCCTGCGGCAGGCTCGCGTGCAGGCGGCGCTGCAGGG CGGGCGGCGGCAGCTGGCGCCCGACGTCCTGTTCTCCGATCCCGGATCGCCGCCCGGGATCCCGCCGTACATGGCGATGA ACCTGGTTCCCGGGGAGTGCGTCGAGCCGGTGCTCAGGTCGGTCGCGGACCGGCCCGCCCCCGAGCTGGTGCGCGCCCGT TTTCTCGACGCGGCCGGCGTCCTGGCCGACCTGCACGACGTCACTCCCGCGGCGGTCGGCCTCGCCGACGAGCCGGTGGT GGACCTGGCGGCGGAGATCGGTCGCTGGCGCCGTGCCTTCGAGACCCTCCCCGACGGGATGCGCGGCGACTACGAACGTG CCGCCGGCGCGCTGGTGTCGACGATCCCCGTGGCGCTGCCGGCCGTGATCAACCACGGCGACTACCGGCTGGGTAACACG CTGTGCGACGGTGCCCGGCTCGCGGCGGTCATCGACTGGGAGATCTGGACCGTCGGCGACCCGCGGGTGGACCTCGCCTG GCTGACGTTCTTCACCGACGATGCCGGGCACCCCGCGGCTGAACCGGGGCCGCCGGCCGGCACACCCACGCCCGACGAGG TCATCCGGGCCTACGAGCGCCGGCGCGGGGTGCCGATCGCCGACCTGGACTGGTTCCACGCCCTCACGCGCTACAAGGAG GCGGCGGCGACCGGGCTGCTGCTGAAGCGGGCGGCCAAGTCCGGCCGGGAGGTGAACGGCGCGCTGGCCCGGATGGTGAC CGCGCTGCCGGGACTGGTCCAGGAGACGCTGAAGATCGTTGGGGATTGA
Upstream 100 bases:
>100_bases CTCGGACGCAGCCGCCTTCATCACCGGGGAGACGCTGCGGGTCACCGGTGGGTTCGCGCTCTCGGTCTAGCCCGACCCGA GCTGAGGAAATGAGACACGC
Downstream 100 bases:
>100_bases CCCCACGGCAGACGATCCGAGGTCTGTGGACGCTGGCGCCCGCCGACCGCTGTGGCGAACGGGAGAATTCTGTGGACGAC GATGTCATGGGGAGCACGCC
Product: aminoglycoside phosphotransferase
Products: NA
Alternate protein names: Phosphotransferase; Phosphotransferase Family Protein; Phosphotransferase Family Protein; Acyl-Co A Dehydrogenase; Acyl-CoA Dehydrogenase FadE; Acyl-CoA Dehydrogenase
Number of amino acids: Translated: 362; Mature: 361
Protein sequence:
>362_residues MADHQAGTAHPADVARQADVAHPAEPALTADLARRLADRLPQWRGESRVGEVRPLTGGTSSLTFLVDVAGVPAAESPIVV KLAPPGLAPVRNRDVLRQARVQAALQGGRRQLAPDVLFSDPGSPPGIPPYMAMNLVPGECVEPVLRSVADRPAPELVRAR FLDAAGVLADLHDVTPAAVGLADEPVVDLAAEIGRWRRAFETLPDGMRGDYERAAGALVSTIPVALPAVINHGDYRLGNT LCDGARLAAVIDWEIWTVGDPRVDLAWLTFFTDDAGHPAAEPGPPAGTPTPDEVIRAYERRRGVPIADLDWFHALTRYKE AAATGLLLKRAAKSGREVNGALARMVTALPGLVQETLKIVGD
Sequences:
>Translated_362_residues MADHQAGTAHPADVARQADVAHPAEPALTADLARRLADRLPQWRGESRVGEVRPLTGGTSSLTFLVDVAGVPAAESPIVV KLAPPGLAPVRNRDVLRQARVQAALQGGRRQLAPDVLFSDPGSPPGIPPYMAMNLVPGECVEPVLRSVADRPAPELVRAR FLDAAGVLADLHDVTPAAVGLADEPVVDLAAEIGRWRRAFETLPDGMRGDYERAAGALVSTIPVALPAVINHGDYRLGNT LCDGARLAAVIDWEIWTVGDPRVDLAWLTFFTDDAGHPAAEPGPPAGTPTPDEVIRAYERRRGVPIADLDWFHALTRYKE AAATGLLLKRAAKSGREVNGALARMVTALPGLVQETLKIVGD >Mature_361_residues ADHQAGTAHPADVARQADVAHPAEPALTADLARRLADRLPQWRGESRVGEVRPLTGGTSSLTFLVDVAGVPAAESPIVVK LAPPGLAPVRNRDVLRQARVQAALQGGRRQLAPDVLFSDPGSPPGIPPYMAMNLVPGECVEPVLRSVADRPAPELVRARF LDAAGVLADLHDVTPAAVGLADEPVVDLAAEIGRWRRAFETLPDGMRGDYERAAGALVSTIPVALPAVINHGDYRLGNTL CDGARLAAVIDWEIWTVGDPRVDLAWLTFFTDDAGHPAAEPGPPAGTPTPDEVIRAYERRRGVPIADLDWFHALTRYKEA AATGLLLKRAAKSGREVNGALARMVTALPGLVQETLKIVGD
Specific function: Unknown
COG id: COG3173
COG function: function code R; Predicted aminoglycoside phosphotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38439; Mature: 38308
Theoretical pI: Translated: 5.44; Mature: 5.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADHQAGTAHPADVARQADVAHPAEPALTADLARRLADRLPQWRGESRVGEVRPLTGGTS CCCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCEECCCCCCC SLTFLVDVAGVPAAESPIVVKLAPPGLAPVRNRDVLRQARVQAALQGGRRQLAPDVLFSD CEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHCCC PGSPPGIPPYMAMNLVPGECVEPVLRSVADRPAPELVRARFLDAAGVLADLHDVTPAAVG CCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC LADEPVVDLAAEIGRWRRAFETLPDGMRGDYERAAGALVSTIPVALPAVINHGDYRLGNT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LCDGARLAAVIDWEIWTVGDPRVDLAWLTFFTDDAGHPAAEPGPPAGTPTPDEVIRAYER HHCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH RRGVPIADLDWFHALTRYKEAAATGLLLKRAAKSGREVNGALARMVTALPGLVQETLKIV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GD CC >Mature Secondary Structure ADHQAGTAHPADVARQADVAHPAEPALTADLARRLADRLPQWRGESRVGEVRPLTGGTS CCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCHHHCCCCCCCCEECCCCCCC SLTFLVDVAGVPAAESPIVVKLAPPGLAPVRNRDVLRQARVQAALQGGRRQLAPDVLFSD CEEEEEEECCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHCCHHHCCCCHHCCC PGSPPGIPPYMAMNLVPGECVEPVLRSVADRPAPELVRARFLDAAGVLADLHDVTPAAVG CCCCCCCCHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHC LADEPVVDLAAEIGRWRRAFETLPDGMRGDYERAAGALVSTIPVALPAVINHGDYRLGNT CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCH LCDGARLAAVIDWEIWTVGDPRVDLAWLTFFTDDAGHPAAEPGPPAGTPTPDEVIRAYER HHCCCCEEEEEEEEEEECCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHH RRGVPIADLDWFHALTRYKEAAATGLLLKRAAKSGREVNGALARMVTALPGLVQETLKIV HCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHH GD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA