Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316249

Identifier: 158316249

GI number: 158316249

Start: 5338138

End: 5339391

Strand: Reverse

Name: 158316249

Synonym: Franean1_4474

Alternate gene names: NA

Gene position: 5339391-5338138 (Counterclockwise)

Preceding gene: 158316250

Following gene: 158316248

Centisome position: 59.45

GC content: 66.35

Gene sequence:

>1254_bases
ATGCCATTTTGTCGTCCACGGCGGCTGAACGCTGCCGTCAGTGTGATCGCGATCAGCGGCCTGACGAGTGTGGTGGCGGC
CTGCGGGATCATGGGCGGGGGAGACGGGTCCGGGCCAGCGACCGAGGGCTGTGCGACACCCGGTGTGACCTCGACCCAGG
TCACTCTCGGAACGGCCATTGACGACACGGGGATCGGCGCGGGTGCCCTCGCGGCGTTCCGCGCCGGGATCGATGCCCGT
CTCGGCGTGGCGAACGACAACGGCGGGGTCAACGGCCGGAAGGTCGTCTATGAGTGGAAGGACACCCAGTCCGACCCGTC
GTCCACCCAGAACGTCGTGCGCGAACTGGTCGAGACCAAGGGCGTGTTCGGCATCATCCAGGGCTCGATCATGGCCCTCA
GCTCGGCGGACTACGTCGAGGAGCACGGCATCCCGGTGGTCGGGCCCAGCATGGACGAGTCCTGGCCAGACCACCCGAAC
ATGATCAGCTGGTTCTACGTCCAGTCCGCGAGATGGTCCGTAAGCACCTGGGGTGACTTCGCGCGGTCCCAGGGGGCTAC
CCGCGTGGCCATCCTCGGCTTGGCCCTCAATCCGGGGACCTACGAGGCTCAGCTACAGGCGAGTATGGAATCGGCCGGGA
TCCCGGTCGTCCTCAACCCGGACGTGACGGTCGGTGCCACCAGTTTCAGCCGACTGGCGCAGGAGTTGAAGGCCGCGAAT
GTCGACACGATCACTGGTGCGGTGACCCCCGACGTCCTGGCCCAGCTCATGCCGGCCGTGCGCAACGCTGGCCTCCAGCT
GAAGCTGGTGATGACACCCACGGGCTACGACCCTGCCCTGCTCCAGCGACTCGGCCCGCAGGTCGCCGGAACGACGATCT
ACGTTGATTTCGCGCCGTTCGAACTGAACCTGCCGGCCCACCAGACATTCATCTCCGCCATGGCCCGGTACGCACCCGAG
ACCCAGCCGCCGCAACAGCAGAGTGCCGTGTGGGGATGGATCTCGGCCGACCTGTACCTGCGCGGGCTGCAGGACGCCGG
CGAATGCCCGACCCGCGAGGGGTTCGTGAACGCGTTGCGCGCCGTCCACGATTACGAGGCGGGCGGACTCCTGTCCAGCA
AGGTCGACTTCGCGACCAACATCGGGCAGCTCAGCACCTGCTACCAGTTCGTGCAGATATCCCAGGACGGAAAGGAGTTC
ATCCCGCTCAACCCCAGCCAGCGCTGCGGTACCATACTGAGCCGTTTCCGGTAA

Upstream 100 bases:

>100_bases
AGTGTTCGATCAACGGCTCTGTAGAGCCGACTCTAAGTGACCTAAAGATTCTAAAGATTACTGAAGGCGGACGGTGTTGG
TAGGCAGGAATCGAGGGCTT

Downstream 100 bases:

>100_bases
GGTTCCGTCGCGCCGAGTAGCGTCATGCTGGTGTTGTTGCGTTGGGTGTCAGCTGGTCCGCAGTACTCGGTGTGGAGGAT
GACGAGAGCGGCTTTTGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 417; Mature: 416

Protein sequence:

>417_residues
MPFCRPRRLNAAVSVIAISGLTSVVAACGIMGGGDGSGPATEGCATPGVTSTQVTLGTAIDDTGIGAGALAAFRAGIDAR
LGVANDNGGVNGRKVVYEWKDTQSDPSSTQNVVRELVETKGVFGIIQGSIMALSSADYVEEHGIPVVGPSMDESWPDHPN
MISWFYVQSARWSVSTWGDFARSQGATRVAILGLALNPGTYEAQLQASMESAGIPVVLNPDVTVGATSFSRLAQELKAAN
VDTITGAVTPDVLAQLMPAVRNAGLQLKLVMTPTGYDPALLQRLGPQVAGTTIYVDFAPFELNLPAHQTFISAMARYAPE
TQPPQQQSAVWGWISADLYLRGLQDAGECPTREGFVNALRAVHDYEAGGLLSSKVDFATNIGQLSTCYQFVQISQDGKEF
IPLNPSQRCGTILSRFR

Sequences:

>Translated_417_residues
MPFCRPRRLNAAVSVIAISGLTSVVAACGIMGGGDGSGPATEGCATPGVTSTQVTLGTAIDDTGIGAGALAAFRAGIDAR
LGVANDNGGVNGRKVVYEWKDTQSDPSSTQNVVRELVETKGVFGIIQGSIMALSSADYVEEHGIPVVGPSMDESWPDHPN
MISWFYVQSARWSVSTWGDFARSQGATRVAILGLALNPGTYEAQLQASMESAGIPVVLNPDVTVGATSFSRLAQELKAAN
VDTITGAVTPDVLAQLMPAVRNAGLQLKLVMTPTGYDPALLQRLGPQVAGTTIYVDFAPFELNLPAHQTFISAMARYAPE
TQPPQQQSAVWGWISADLYLRGLQDAGECPTREGFVNALRAVHDYEAGGLLSSKVDFATNIGQLSTCYQFVQISQDGKEF
IPLNPSQRCGTILSRFR
>Mature_416_residues
PFCRPRRLNAAVSVIAISGLTSVVAACGIMGGGDGSGPATEGCATPGVTSTQVTLGTAIDDTGIGAGALAAFRAGIDARL
GVANDNGGVNGRKVVYEWKDTQSDPSSTQNVVRELVETKGVFGIIQGSIMALSSADYVEEHGIPVVGPSMDESWPDHPNM
ISWFYVQSARWSVSTWGDFARSQGATRVAILGLALNPGTYEAQLQASMESAGIPVVLNPDVTVGATSFSRLAQELKAANV
DTITGAVTPDVLAQLMPAVRNAGLQLKLVMTPTGYDPALLQRLGPQVAGTTIYVDFAPFELNLPAHQTFISAMARYAPET
QPPQQQSAVWGWISADLYLRGLQDAGECPTREGFVNALRAVHDYEAGGLLSSKVDFATNIGQLSTCYQFVQISQDGKEFI
PLNPSQRCGTILSRFR

Specific function: Unknown

COG id: COG0683

COG function: function code E; ABC-type branched-chain amino acid transport systems, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44071; Mature: 43940

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFCRPRRLNAAVSVIAISGLTSVVAACGIMGGGDGSGPATEGCATPGVTSTQVTLGTAI
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECEE
DDTGIGAGALAAFRAGIDARLGVANDNGGVNGRKVVYEWKDTQSDPSSTQNVVRELVETK
CCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC
GVFGIIQGSIMALSSADYVEEHGIPVVGPSMDESWPDHPNMISWFYVQSARWSVSTWGDF
CCEEEECCCEEEECCCHHHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
ARSQGATRVAILGLALNPGTYEAQLQASMESAGIPVVLNPDVTVGATSFSRLAQELKAAN
HHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHCC
VDTITGAVTPDVLAQLMPAVRNAGLQLKLVMTPTGYDPALLQRLGPQVAGTTIYVDFAPF
CCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCE
ELNLPAHQTFISAMARYAPETQPPQQQSAVWGWISADLYLRGLQDAGECPTREGFVNALR
EECCCHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEHHHHEECCCCCCCCCCHHHHHHHHH
AVHDYEAGGLLSSKVDFATNIGQLSTCYQFVQISQDGKEFIPLNPSQRCGTILSRFR
HHHHCCCCCEECCCHHHHHCCHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCC
>Mature Secondary Structure 
PFCRPRRLNAAVSVIAISGLTSVVAACGIMGGGDGSGPATEGCATPGVTSTQVTLGTAI
CCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECEE
DDTGIGAGALAAFRAGIDARLGVANDNGGVNGRKVVYEWKDTQSDPSSTQNVVRELVETK
CCCCCCHHHHHHHHCCCCCEEEECCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHHC
GVFGIIQGSIMALSSADYVEEHGIPVVGPSMDESWPDHPNMISWFYVQSARWSVSTWGDF
CCEEEECCCEEEECCCHHHHHCCCCEECCCCCCCCCCCCCCEEEEEEECCCCCCHHHHHH
ARSQGATRVAILGLALNPGTYEAQLQASMESAGIPVVLNPDVTVGATSFSRLAQELKAAN
HHHCCCCEEEEEEEEECCCCCHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHCC
VDTITGAVTPDVLAQLMPAVRNAGLQLKLVMTPTGYDPALLQRLGPQVAGTTIYVDFAPF
CCCEECCCCHHHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHCCCCCCCEEEEEEECCE
ELNLPAHQTFISAMARYAPETQPPQQQSAVWGWISADLYLRGLQDAGECPTREGFVNALR
EECCCHHHHHHHHHHHHCCCCCCCHHHHHEEEEEEHHHHEECCCCCCCCCCHHHHHHHHH
AVHDYEAGGLLSSKVDFATNIGQLSTCYQFVQISQDGKEFIPLNPSQRCGTILSRFR
HHHHCCCCCEECCCHHHHHCCHHHHHHHHHHHHCCCCCEECCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA