| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
Click here to switch to the map view.
The map label for this gene is fadB [C]
Identifier: 158316236
GI number: 158316236
Start: 5328032
End: 5328838
Strand: Reverse
Name: fadB [C]
Synonym: Franean1_4460
Alternate gene names: 158316236
Gene position: 5328838-5328032 (Counterclockwise)
Preceding gene: 158316237
Following gene: 158316230
Centisome position: 59.33
GC content: 58.12
Gene sequence:
>807_bases GTGGAATCGGACAGCTCCAATATTGACATGGCGGTGTCGGTATATAATTCAGCTATGTGGGGTCGCGAGGCGGGGAATGG GGCTCATTTGGGGGGGCAATTGGCTACCTATCGAACATCAAGACCTTCTCTGCGCAGAAATGGGCCCGCGCTGATCCTCG ACCTCGGCGCCGACGGGAACCCGTTAGACACGGACACTCTCTCTCAGTTGAATTTGTTGCTGGACGAGATAGAGCAGACG CCGTCGCCATGCTTCCTCGTCACCATCGGCTCAGGGGGACATTGGTGTATTGGCGTGAATGTCGCCTGGGTGTTCAAGGT AGACGAAGATGAGATCGCTTCCTTTGTCGTCGAGGTCCATCGGCTCTACGCGAGGTTTCTGACGCTGCCGATGGTGTCCA TCGCCGCAATTCAGGGAAACGCTGTCGCCAGCGGCCTTATGCTTGCGTTGTCACATGACTTCCGCGTTATGCGGCCGGGG CAGGGTTTCCTGTCTCTTCTCAACGTGGATCTTGGCTATCCCCTTGCCGTTGAGGACACGCTTCTGCTACGCGCCAAGCT TCCGCACCCCACGATCATGGAGATGGTCGCCACAGGAAAGCGCTACGATGCGGCCACCGCTAAGGCGGCCGGTCTCGTCG ACATTGTGACTTCCGGTGAAACTGTCCTCGACGCGGCCACCGCGTTTGGACTGCCTCTTGCTCGCAAGAATAGAAACGTG ATCGAAAACTTCAAGAAAGTGCTTTTCGACGAGGTTCTCCGTGCCCCGTCCGGCCCGTGGCCAGGGGCCTACAGTCGTCT CCCGTAG
Upstream 100 bases:
>100_bases GTTCCTCAGCCTCGCCTGCTCGATCATCTGCCTTCGGAAACTCGGCGGATCATTCTGAAACGACCTGTAAGTCGCATATC ACTTAAAGGTCGACCTGTAG
Downstream 100 bases:
>100_bases AGTTTTCGCAACTGATGGTAAAAATTCTGTCCAAACGGTCCCTGGTCCGGGCGCGGTTAGCCTGTTTCCGGGAAGTGTTC TGTACCCCCAACCGCTTGCC
Product: enoyl-CoA hydratase/isomerase
Products: acetyl-CoA; acyl-CoA; L-3-hydroxyacyl-CoA; NADH; Proton; 3-ketoacyl-CoA; trans-Delta2-enoyl-CoA + [C]
Alternate protein names: Enoyl-CoA Hydratase; Enoyl-CoA Hydratase/Isomerase Family Protein; Enoyl-CoA Hydratase/Carnithine Racemase; Enoyl-Coa Hydratase/Isomerase Family Protein; Short Chain Enoyl-CoA Hydratase; Carnitine Racemase-Like Protein
Number of amino acids: Translated: 268; Mature: 268
Protein sequence:
>268_residues MESDSSNIDMAVSVYNSAMWGREAGNGAHLGGQLATYRTSRPSLRRNGPALILDLGADGNPLDTDTLSQLNLLLDEIEQT PSPCFLVTIGSGGHWCIGVNVAWVFKVDEDEIASFVVEVHRLYARFLTLPMVSIAAIQGNAVASGLMLALSHDFRVMRPG QGFLSLLNVDLGYPLAVEDTLLLRAKLPHPTIMEMVATGKRYDAATAKAAGLVDIVTSGETVLDAATAFGLPLARKNRNV IENFKKVLFDEVLRAPSGPWPGAYSRLP
Sequences:
>Translated_268_residues MESDSSNIDMAVSVYNSAMWGREAGNGAHLGGQLATYRTSRPSLRRNGPALILDLGADGNPLDTDTLSQLNLLLDEIEQT PSPCFLVTIGSGGHWCIGVNVAWVFKVDEDEIASFVVEVHRLYARFLTLPMVSIAAIQGNAVASGLMLALSHDFRVMRPG QGFLSLLNVDLGYPLAVEDTLLLRAKLPHPTIMEMVATGKRYDAATAKAAGLVDIVTSGETVLDAATAFGLPLARKNRNV IENFKKVLFDEVLRAPSGPWPGAYSRLP >Mature_268_residues MESDSSNIDMAVSVYNSAMWGREAGNGAHLGGQLATYRTSRPSLRRNGPALILDLGADGNPLDTDTLSQLNLLLDEIEQT PSPCFLVTIGSGGHWCIGVNVAWVFKVDEDEIASFVVEVHRLYARFLTLPMVSIAAIQGNAVASGLMLALSHDFRVMRPG QGFLSLLNVDLGYPLAVEDTLLLRAKLPHPTIMEMVATGKRYDAATAKAAGLVDIVTSGETVLDAATAFGLPLARKNRNV IENFKKVLFDEVLRAPSGPWPGAYSRLP
Specific function: FADb And FADa Are The Alpha And Beta Subunits Of The Multifunctional Enzyme Complex Of The Fatty Acid Degradation Cycle. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Drosophila melanogaster, GI24650670, Length=218, Percent_Identity=27.5229357798165, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 4.2.1.17; 5.3.3.8; 1.1.1.35; 5.1.2.3 [C]
Molecular weight: Translated: 28848; Mature: 28848
Theoretical pI: Translated: 5.31; Mature: 5.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESDSSNIDMAVSVYNSAMWGREAGNGAHLGGQLATYRTSRPSLRRNGPALILDLGADGN CCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCC PLDTDTLSQLNLLLDEIEQTPSPCFLVTIGSGGHWCIGVNVAWVFKVDEDEIASFVVEVH CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHH RLYARFLTLPMVSIAAIQGNAVASGLMLALSHDFRVMRPGQGFLSLLNVDLGYPLAVEDT HHHHHHHHHHHHHHHEECCCHHHHHHHEEEECCCEEECCCHHHHHHHHHCCCCCEEECCE LLLRAKLPHPTIMEMVATGKRYDAATAKAAGLVDIVTSGETVLDAATAFGLPLARKNRNV EEEEECCCCHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHCCCHH IENFKKVLFDEVLRAPSGPWPGAYSRLP HHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MESDSSNIDMAVSVYNSAMWGREAGNGAHLGGQLATYRTSRPSLRRNGPALILDLGADGN CCCCCCCCEEEEEEHHHHHCCCCCCCCCCCCCCEEEEECCCCCCCCCCCEEEEEECCCCC PLDTDTLSQLNLLLDEIEQTPSPCFLVTIGSGGHWCIGVNVAWVFKVDEDEIASFVVEVH CCCHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCEEEEEEEEEEEEECHHHHHHHHHHHH RLYARFLTLPMVSIAAIQGNAVASGLMLALSHDFRVMRPGQGFLSLLNVDLGYPLAVEDT HHHHHHHHHHHHHHHEECCCHHHHHHHEEEECCCEEECCCHHHHHHHHHCCCCCEEECCE LLLRAKLPHPTIMEMVATGKRYDAATAKAAGLVDIVTSGETVLDAATAFGLPLARKNRNV EEEEECCCCHHHHHHHHCCCCCCCHHHHHCCEEEEECCCCHHHHHHHHHCCCHHHCCCHH IENFKKVLFDEVLRAPSGPWPGAYSRLP HHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): 0.066 {acetoacetyl-CoA}} [C]
Substrates: Coenzyme A; 3-ketoacyl-CoA; D-3-hydroxyacyl-CoA; NAD; L-3-hydroxyacyl-CoA; H2O; trans-Delta2-enoyl-CoA; cis-Delta3-enoyl-CoA [C]
Specific reaction: Coenzyme A + 3-ketoacyl-CoA = acetyl-CoA + acyl-CoA D-3-hydroxyacyl-CoA = L-3-hydroxyacyl-CoA NAD + L-3-hydroxyacyl-CoA = NADH + Proton + 3-ketoacyl-CoA H2O + trans-Delta2-enoyl-CoA = L-3-hydroxyacyl-CoA cis-Delta3-enoyl-CoA = trans-Delta2-enoyl-CoA [C]
General reaction: Redox reaction [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA