Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316230

Identifier: 158316230

GI number: 158316230

Start: 5320990

End: 5322171

Strand: Reverse

Name: 158316230

Synonym: Franean1_4454

Alternate gene names: NA

Gene position: 5322171-5320990 (Counterclockwise)

Preceding gene: 158316236

Following gene: 158316229

Centisome position: 59.25

GC content: 66.58

Gene sequence:

>1182_bases
GTGAGACTGATGGATCCGGCGCTGTTAGACGAAATCAAGATCATTGACACGGACACCCATGTGGTGGAGCCACCGGATCT
GTGGACCTCACGGGTGTCGGTGCGCAAGTGGGGTTCGCTGGTGCCGCACATCCGGCCGGACGCGTCGGGTGACCCGGCGT
GGTTCGTCGGGGACCAGCGGATGTTGGGAGTGGCGGCGGCGGCGATGGCGGGCTGGCACGAGTACCAGCCGGATCATCCG
CTGCGGCTGGAGGACGCGGACCGGGCGGCGTGGGATCCGGCGGCGCGACTCAAGCGGATGGACGAGGACGGCATCCACGC
GCAGGTCCTCTATCCAAACGTGGCGGGCTTCGGCGGGGGCAACTTCACGAAGGTCGAAAATCCGGATCTGATGCTGGATC
TGGTGCGCGCCTACAACGACTTCCTGACAGATTTCGCCGGTGTCGCGCCGGGCCGTTACATCCCGATCAGCGCCGTTCCG
TTCTGGGACCTGGAGCTGGCGGCCAAGGAGATCGACCGGGTCGCGGCGGCCGGGCACAAGGGTCTGATCATGACGGCGGC
GCCCGAGAACTGGGGCCAGCCGTTCCTGGAGGACCCTCACTGGGACCCGCTCTGGGCGAAGGCCCAGGAGGTCGGCCTGC
CGATCAACTTCCACATCGGGTCGGGGGACATCTCCGCGTACCCGACGCACCCCGGTGGGAAGCACGCCAACTCGGCTTCG
CTCGCGGTCCTCAACTTCATGGGTAACGCGGCGGCCATCGTCCGGGTGATCTGTGGCGGTATCTGCCACCGGTTCCCGGA
GCTGAACATCGTCTCGGTGGAAAGCGGCGTGGGCTGGATCCCGTTCGCGCTCGAGGCGCTGGACTGGCAGTGGTACAACT
GCGGTGTTCCGCAGGAGCACCCGGAGTACGAGCTGTCGCCGAAGGAGTACTTCCTGCGGCAGGTCTACGGGTGTTTCTGG
TTCGAGCGGGACACCGCGATGAGCGCGATCAGCCAGGTCGGGGCGCGGAACTTCATGTACGAGACGGATTTCCCGCACCC
GACGAGCATGACGCCCGGCCCGGCGTCGATCGCGACGACGCCGCGGGAGTACCTGCTCGCCGCGATGGCCGATCTGCCGG
ACGAGACCGTGCGACTGCTGTTGCAGGACAACGCCGCCCGCATCTACCATCTCGATCTCTGA

Upstream 100 bases:

>100_bases
TTCTGGTTCGCGTGCTTATGGTGGATCGTCGTGGCCGCCGCCCGGTACCTGGGCGGTGCCAGGTGCGCGGCGCTGCCCAT
CGCTGGGGTGACGAAGGGGC

Downstream 100 bases:

>100_bases
CGCCCGTCCCGGGCGCACATGTCCACGAGGTTTTGAACGGGCACGTCGACGTCATCGGTAACGCCGGTGCCCGTTGTGGT
GGCGCGCCAGTCGGACCGCG

Product: amidohydrolase 2

Products: NA

Alternate protein names: Amidase; Amidohydrolase Family Protein; Metal-Dependent Hydrolase; Barh Protein; TIM-Barrel Fold Metal-Dependent Hydrolase; Metal-Dependent Amidohydrolase; Amidohydrolase 2 Protein; Hydrolase; Aminocarboxymuconate-Semialdehyde Decarboxylase; Amidohydrolase Family; Minocarboxymuconate-Semialdehyde Decarboxylase.

Number of amino acids: Translated: 393; Mature: 393

Protein sequence:

>393_residues
MRLMDPALLDEIKIIDTDTHVVEPPDLWTSRVSVRKWGSLVPHIRPDASGDPAWFVGDQRMLGVAAAAMAGWHEYQPDHP
LRLEDADRAAWDPAARLKRMDEDGIHAQVLYPNVAGFGGGNFTKVENPDLMLDLVRAYNDFLTDFAGVAPGRYIPISAVP
FWDLELAAKEIDRVAAAGHKGLIMTAAPENWGQPFLEDPHWDPLWAKAQEVGLPINFHIGSGDISAYPTHPGGKHANSAS
LAVLNFMGNAAAIVRVICGGICHRFPELNIVSVESGVGWIPFALEALDWQWYNCGVPQEHPEYELSPKEYFLRQVYGCFW
FERDTAMSAISQVGARNFMYETDFPHPTSMTPGPASIATTPREYLLAAMADLPDETVRLLLQDNAARIYHLDL

Sequences:

>Translated_393_residues
MRLMDPALLDEIKIIDTDTHVVEPPDLWTSRVSVRKWGSLVPHIRPDASGDPAWFVGDQRMLGVAAAAMAGWHEYQPDHP
LRLEDADRAAWDPAARLKRMDEDGIHAQVLYPNVAGFGGGNFTKVENPDLMLDLVRAYNDFLTDFAGVAPGRYIPISAVP
FWDLELAAKEIDRVAAAGHKGLIMTAAPENWGQPFLEDPHWDPLWAKAQEVGLPINFHIGSGDISAYPTHPGGKHANSAS
LAVLNFMGNAAAIVRVICGGICHRFPELNIVSVESGVGWIPFALEALDWQWYNCGVPQEHPEYELSPKEYFLRQVYGCFW
FERDTAMSAISQVGARNFMYETDFPHPTSMTPGPASIATTPREYLLAAMADLPDETVRLLLQDNAARIYHLDL
>Mature_393_residues
MRLMDPALLDEIKIIDTDTHVVEPPDLWTSRVSVRKWGSLVPHIRPDASGDPAWFVGDQRMLGVAAAAMAGWHEYQPDHP
LRLEDADRAAWDPAARLKRMDEDGIHAQVLYPNVAGFGGGNFTKVENPDLMLDLVRAYNDFLTDFAGVAPGRYIPISAVP
FWDLELAAKEIDRVAAAGHKGLIMTAAPENWGQPFLEDPHWDPLWAKAQEVGLPINFHIGSGDISAYPTHPGGKHANSAS
LAVLNFMGNAAAIVRVICGGICHRFPELNIVSVESGVGWIPFALEALDWQWYNCGVPQEHPEYELSPKEYFLRQVYGCFW
FERDTAMSAISQVGARNFMYETDFPHPTSMTPGPASIATTPREYLLAAMADLPDETVRLLLQDNAARIYHLDL

Specific function: Unknown

COG id: COG2159

COG function: function code R; Predicted metal-dependent hydrolase of the TIM-barrel fold

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 43608; Mature: 43608

Theoretical pI: Translated: 4.66; Mature: 4.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLMDPALLDEIKIIDTDTHVVEPPDLWTSRVSVRKWGSLVPHIRPDASGDPAWFVGDQR
CCCCCCHHHCCEEEEECCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHH
MLGVAAAAMAGWHEYQPDHPLRLEDADRAAWDPAARLKRMDEDGIHAQVLYPNVAGFGGG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC
NFTKVENPDLMLDLVRAYNDFLTDFAGVAPGRYIPISAVPFWDLELAAKEIDRVAAAGHK
CCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
GLIMTAAPENWGQPFLEDPHWDPLWAKAQEVGLPINFHIGSGDISAYPTHPGGKHANSAS
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCCC
LAVLNFMGNAAAIVRVICGGICHRFPELNIVSVESGVGWIPFALEALDWQWYNCGVPQEH
EEEEHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCEEEEECCCCCCC
PEYELSPKEYFLRQVYGCFWFERDTAMSAISQVGARNFMYETDFPHPTSMTPGPASIATT
CCCCCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC
PREYLLAAMADLPDETVRLLLQDNAARIYHLDL
HHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECC
>Mature Secondary Structure
MRLMDPALLDEIKIIDTDTHVVEPPDLWTSRVSVRKWGSLVPHIRPDASGDPAWFVGDQR
CCCCCCHHHCCEEEEECCCCEECCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCHH
MLGVAAAAMAGWHEYQPDHPLRLEDADRAAWDPAARLKRMDEDGIHAQVLYPNVAGFGGG
HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEEECCCCCCCCC
NFTKVENPDLMLDLVRAYNDFLTDFAGVAPGRYIPISAVPFWDLELAAKEIDRVAAAGHK
CCCEECCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCC
GLIMTAAPENWGQPFLEDPHWDPLWAKAQEVGLPINFHIGSGDISAYPTHPGGKHANSAS
CEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCCCEECCCCCCCCCCCCCC
LAVLNFMGNAAAIVRVICGGICHRFPELNIVSVESGVGWIPFALEALDWQWYNCGVPQEH
EEEEHHHCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHCEEEEECCCCCCC
PEYELSPKEYFLRQVYGCFWFERDTAMSAISQVGARNFMYETDFPHPTSMTPGPASIATT
CCCCCCHHHHHHHHHHHHHEECHHHHHHHHHHHHHCCCEEECCCCCCCCCCCCCCCCCCC
PREYLLAAMADLPDETVRLLLQDNAARIYHLDL
HHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA