| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316226
Identifier: 158316226
GI number: 158316226
Start: 5315832
End: 5316692
Strand: Reverse
Name: 158316226
Synonym: Franean1_4450
Alternate gene names: NA
Gene position: 5316692-5315832 (Counterclockwise)
Preceding gene: 158316227
Following gene: 158316225
Centisome position: 59.19
GC content: 73.05
Gene sequence:
>861_bases GTGACCCACTTCGGCATCTCCCTCCTGCGCGTGTCACCAGGCGCATGGACGGAGGTGGCCCAGGAGGCCGAGCGGCTCGG TTTCGAGTCAGTGTGGATGTCGGACCACCTGGTGCTGCCCGCCGAGATGGACGCCGCGGACTACCCGGACGGTCGCCTGC CGATCCGCCCCGAGACCCCGGTGTTCGACTCGCTGGTCTACCTCGCCGCGATCGCGGCGAGGACGCGGACGCTGCGCCTC GGAACGTACGTCTACCAGCTCGGCCTGCGGCACCCGCTGGCGGTGGCGCGGGCGGTGGCGACGCTGGACGTGGTGTCCGC CGGTCGGGTCGAGCTGGGGATCGGCGCCGGGTGGATGCCGGCGGAGTGGGCCGCCGCCGGCATGCCGCAGTCTGTGGACG GAGCCCGTCCCGCGGCACGACGGCGAGTTCTTCCGGTTCCCAGCCGTCCGGTTCGAACCGAAGCCAGTCCAGGATCCCCT GCTGGTGCACGTCGGCGGAGAGTCACCGCCCGCCCTGCGCAGGGCCGTCCGGTCCGGCGACGGATGGATCGGGATGCACG ATACGCCCGCCTCCGTCGAGGCGCCGCTGGCCAGCCTGCGCAACGCCGCCGCCCGGCACGGCCGCACCCGGCCGCTGACC ACCACCGTCGCAGCCCCGCCGGGGGAGGATGTGGACGTCGCCGGCTGGCTCGCCTCGGGGGTGGACCGGGTCATCGTGAC ACCCTGGGCGCGGTCCCGAGACGCGATCCCCGGGATGCGCCGGTTCGCCGAGCGCATCCCCGCGAGACGTGCGGCCAGCT AGCTACTGTAATGGTCGGCGCCGGCCATGAGCTGGAGCAGTACCCGACAGCAATCAGGTGA
Upstream 100 bases:
>100_bases ACCCCACGGTCGCGTCGATCGCCCTGATCATGTCGTTCGTGACCGCTGCCGGGGTCGCGGTGGCGACCTTCATCGGCGGC TCGGACGCGCTGCGGCGCCT
Downstream 100 bases:
>100_bases CGGCGGCGTGCCATTCGACGCGAGCGCGGACCCCACGTGTTGGACACGCTGGCAGCCTCCAGACGCTCCCCAGCTCGACG CCTCGTCGCCACGCCACGGC
Product: coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein
Products: NA
Alternate protein names: Hybride Transferase/; Luciferase-Like Protein; Luciferase-Like Subgroup
Number of amino acids: Translated: 286; Mature: 285
Protein sequence:
>286_residues MTHFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETPVFDSLVYLAAIAARTRTLRL GTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMPAEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSP AGARRRRVTARPAQGRPVRRRMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR
Sequences:
>Translated_286_residues MTHFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETPVFDSLVYLAAIAARTRTLRL GTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMPAEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSP AGARRRRVTARPAQGRPVRRRMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR >Mature_285_residues THFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETPVFDSLVYLAAIAARTRTLRLG TYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMPAEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSPA GARRRRVTARPAQGRPVRRRMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRDT LGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR
Specific function: Unknown
COG id: COG2141
COG function: function code C; Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31120; Mature: 30989
Theoretical pI: Translated: 12.12; Mature: 12.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETP CCCCCEEEEEECCCHHHHHHHHHHHCCHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCC VFDSLVYLAAIAARTRTLRLGTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC AEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSPAGARRRRVTARPAQGRPVRR HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHH RMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCC >Mature Secondary Structure THFGISLLRVSPGAWTEVAQEAERLGFESVWMSDHLVLPAEMDAADYPDGRLPIRPETP CCCCEEEEEECCCHHHHHHHHHHHCCHHHEECCCCEEECCCCCCCCCCCCCCCCCCCCC VFDSLVYLAAIAARTRTLRLGTYVYQLGLRHPLAVARAVATLDVVSAGRVELGIGAGWMP HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCC AEWAAAGMPQSVDGARPAARRRVLPVPSRPVRTEASPGSPAGARRRRVTARPAQGRPVRR HHHHHCCCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCHHHH RMDRDARYARLRRGAAGQPAQRRRPARPHPAADHHRRSPAGGGCGRRRLARLGGGPGHRD HHHHHHHHHHHHCCCCCCCHHHCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHCCCCCCCC TLGAVPRRDPRDAPVRRAHPRETCGQLATVMVGAGHELEQYPTAIR HHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA