| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316187
Identifier: 158316187
GI number: 158316187
Start: 5267149
End: 5267382
Strand: Reverse
Name: 158316187
Synonym: Franean1_4410
Alternate gene names: NA
Gene position: 5267382-5267149 (Counterclockwise)
Preceding gene: 158316189
Following gene: 158316185
Centisome position: 58.64
GC content: 64.96
Gene sequence:
>234_bases TTGGATCGCTGGCTGCCAGCCGGTGGGATCGACCGTCAGTCGGTGGCTCAGTCGTCCCGGCGTCGTCCCCGGCACGGTCA TCCGGACAACAAGACGAGCCCCGTCGTCTTCGACCCGTTGCACGACCTGGGCGAGCCAACCGTCTCCGGTGTCCGGACGG CCCACCTGTACAACAGTTTCGTCACAGGCGGGTTGATCACCGATATCGCCAAGTCGCACCACCTGTCCGAGTGA
Upstream 100 bases:
>100_bases GTAATCGCTTGACTGTATGCCCTATACCATCAGGTTTGGTAGGATTTGTCTCAGCGTTCGCGCCGATCCGATCATCAGTT GCGTGATAGTTGGTGATTAC
Downstream 100 bases:
>100_bases AGTTGGCCCGTTTCTGTTCACCCCTGGGCGCTTCGGGATAACGGTCCCAGGGAGGAGTGCAGGTGCCGAGATCACAGCCG CCGTACACGGAGGAGTTCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 77; Mature: 77
Protein sequence:
>77_residues MDRWLPAGGIDRQSVAQSSRRRPRHGHPDNKTSPVVFDPLHDLGEPTVSGVRTAHLYNSFVTGGLITDIAKSHHLSE
Sequences:
>Translated_77_residues MDRWLPAGGIDRQSVAQSSRRRPRHGHPDNKTSPVVFDPLHDLGEPTVSGVRTAHLYNSFVTGGLITDIAKSHHLSE >Mature_77_residues MDRWLPAGGIDRQSVAQSSRRRPRHGHPDNKTSPVVFDPLHDLGEPTVSGVRTAHLYNSFVTGGLITDIAKSHHLSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8481; Mature: 8481
Theoretical pI: Translated: 9.27; Mature: 9.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDRWLPAGGIDRQSVAQSSRRRPRHGHPDNKTSPVVFDPLHDLGEPTVSGVRTAHLYNSF CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHH VTGGLITDIAKSHHLSE HHHHHHHHHHHHHCCCC >Mature Secondary Structure MDRWLPAGGIDRQSVAQSSRRRPRHGHPDNKTSPVVFDPLHDLGEPTVSGVRTAHLYNSF CCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCEEECCHHHCCCCCHHHHHHHHHHHHH VTGGLITDIAKSHHLSE HHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA