| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316185
Identifier: 158316185
GI number: 158316185
Start: 5265445
End: 5265684
Strand: Reverse
Name: 158316185
Synonym: Franean1_4408
Alternate gene names: NA
Gene position: 5265684-5265445 (Counterclockwise)
Preceding gene: 158316187
Following gene: 158316182
Centisome position: 58.62
GC content: 65.42
Gene sequence:
>240_bases ATGGGCGATACCAGCCGACTCGACGCAATCGCTGCCCGCCTGCTCACCGCGGAGCGCGCCAACCGTGGCGTCCGACACCT GGCCAACGCGGCGGTCGAAATCGGAGAGATGGTGGACACCGCCGGCGCTGTCGCCATCCTCTCCGAGTACCGCCAGGCGT ACCGCGAGGTGCATGACGTGCTCACTAACGGTGACCCGGTCGATATCGTTTACCTGGCCTCACAGTTCGACCCATCCTGA
Upstream 100 bases:
>100_bases GCCCACGTTGCTACCCGCGTGGTCGGCTGCCGGCCATCATGGGTAGACCATCGACAGCGGCGCGAGCACAGCCACCTCGA AACGGGAATTGAAGGTCATG
Downstream 100 bases:
>100_bases CCCAGTCTTCCAGGTTTACCTGCGTCGGCACTGTTGCGTCGTGGGGTAGACGCGCATGCCGGGGCCCGGCCGGCCGGCGG TCAGATGGCGTGGGTGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 79; Mature: 78
Protein sequence:
>79_residues MGDTSRLDAIAARLLTAERANRGVRHLANAAVEIGEMVDTAGAVAILSEYRQAYREVHDVLTNGDPVDIVYLASQFDPS
Sequences:
>Translated_79_residues MGDTSRLDAIAARLLTAERANRGVRHLANAAVEIGEMVDTAGAVAILSEYRQAYREVHDVLTNGDPVDIVYLASQFDPS >Mature_78_residues GDTSRLDAIAARLLTAERANRGVRHLANAAVEIGEMVDTAGAVAILSEYRQAYREVHDVLTNGDPVDIVYLASQFDPS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8529; Mature: 8397
Theoretical pI: Translated: 4.48; Mature: 4.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGDTSRLDAIAARLLTAERANRGVRHLANAAVEIGEMVDTAGAVAILSEYRQAYREVHDV CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTNGDPVDIVYLASQFDPS HCCCCCEEEEEECCCCCCC >Mature Secondary Structure GDTSRLDAIAARLLTAERANRGVRHLANAAVEIGEMVDTAGAVAILSEYRQAYREVHDV CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LTNGDPVDIVYLASQFDPS HCCCCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA