Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is 158316178

Identifier: 158316178

GI number: 158316178

Start: 5247957

End: 5249657

Strand: Reverse

Name: 158316178

Synonym: Franean1_4401

Alternate gene names: NA

Gene position: 5249657-5247957 (Counterclockwise)

Preceding gene: 158316179

Following gene: 158316176

Centisome position: 58.45

GC content: 68.49

Gene sequence:

>1701_bases
ATGCCTGAGGACAGCGACACCATCCTGCTCGACTACGCCCTCTCCACCGACCCGGCCCCCGTCCCGGCCAGCACCGCCCA
AGTCGTCAACCAGGCCCGGGTGAATATCGGCGTCAGCGCCGAAACCACCGTCTACTGCAGCCAGATCGTGATCGCCGTGC
CGATCGGCACGGACGACGCGAGCCTGTACGCGCTGGCGCCGGCCGGGTCGTCGAACAGCAACAAGTGGGCCGTCACGGCC
CAGCTGCGCAAGGGCCGCGACCTCTGGGACGGCCTGGACGAGGACCAGGACTACAGCACCTTCGTCTACGACTGTGTCTC
CAGCACCGACTACCGCGTCGACTACAACCTGGTCTTCGGCGTCTTCGGCGCGGTGAACCAGACAGTCGGTGACGCCGAGA
TCGCGATCCAGGAGACCTCCGGGACCAGCTCCGACCCGACCACCTTCACGTTGAAGCCGGCCTACTTCCCGGTGCGCAAG
GAATGGCCGGCCTTCTACCTGAAGAACCTGGTCGCGGCCACGCTGGCCAGTCCCACCGTGCCGGCCACCGACTTCTCCGA
AGGCGACCCCGTCCGGCTGTCCTGGGAGAGCAACGGCACCTATTTCCAGCTGTTCACGAAGGGGCAGAGCCGGCCGGTCT
ACGCCGGCACCGCGACCACCTACACGCTGGAGGAAGGGCTCTCCCGCGACACGGCCTTCGTCCTCACCGCGTCGATGACC
GGTTCCCCGGACGAAGACGTCCCGCAGGGCGGCTACGAGCCGATCTACCTGTACGACGCGCTCACCGTCAGCGTGTCCAA
CCCGGTGCTCACCCCGAGCAGTGTGACGGTCTCCGGCACCCTGGAGGTGTCAGGCACCAGTTACCTGTCCACCACCGAGA
CCGGCTCGCTGAGCTCATCCAGCGTCAGCGTGAACGGCTCGCTGGACGTGGACGGCTCCACAAGCCTGAGCGACACCACC
GTCGACGACGGGCTGACGGTCCGCGGCTCCACCGAGCTGGAGGAATCGCTGAGCGTCTCCGGCAGCACCAGCCTCTCCGA
CGCGACGGTGACCGGGACGCTGTCCGGGACAGGATCGGCCTCGCTGAGCGACCTGACCGTGCGGGGGCTGTACGGCTACT
CCGGGCGGGTGGAGCTGCTCGGCAACGCGAATCTGGTCGACCAGGGCGCCAACCTCGGCCAGACCGGCGTCTACACCGCG
ACCGACGGCTTCGCGGTGGCCCAGGTGCTCACCCCCAGCGACAACAGCCAGGCCTCGTACGCCTACGGCTGGATCTACAC
CTCGGGTACCTGGTTCGGTGTGCAGGGCGGCACCGTCGGCTCCTTCGGCCCCGGCTGGAGCGACTTCATGAACACCAACC
CGAATACGATCACCGTGCCGATCCCGGCGGGCTCCTACTGGTACTACGAGAGCTTCAACCCCTCCAACAACCAGGTCTAC
AGCGACGTCCAGTTCTGGTGGTTCCCGCTGGGCAGCGACTACGGCGCCACGGCGACCTACCGCAAGCTCACCGCCGAGGA
GCGGGTCGCGGAGCAGGTAGAGGTGCCGCCGGCGCGACCGGCCGTCCCCGACATCGCCGCGGCCGTCGAGCGCCGCGAGA
ACGCCGCGGCGGCCTTCGTCGAGCGGCTGGCGGCGGCGTTGGAGGCCGACCTGGCCGAGGAGGTGCGGGCCGACCTGACC
CGGCTCCTGAACCAGCACTGA

Upstream 100 bases:

>100_bases
GGCCTGACCGCCGCCTCGCCCAGCGCCACCAGTGGTCTGCCACCGAACACCCTGCGCGAGGGCTACCTGCAGTTCATCAC
TGATCTCAAGGAGCAGCCGC

Downstream 100 bases:

>100_bases
CGGCTGGCGGCTGGGCTCCTCCGCGCGGCGGGTGACCGAAGGGCAGCTGTGCGAGGGAGCCCAGCGCGGCAGCAGGCGAC
GGGCCGGGCGGCGCTGCTCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 566; Mature: 565

Protein sequence:

>566_residues
MPEDSDTILLDYALSTDPAPVPASTAQVVNQARVNIGVSAETTVYCSQIVIAVPIGTDDASLYALAPAGSSNSNKWAVTA
QLRKGRDLWDGLDEDQDYSTFVYDCVSSTDYRVDYNLVFGVFGAVNQTVGDAEIAIQETSGTSSDPTTFTLKPAYFPVRK
EWPAFYLKNLVAATLASPTVPATDFSEGDPVRLSWESNGTYFQLFTKGQSRPVYAGTATTYTLEEGLSRDTAFVLTASMT
GSPDEDVPQGGYEPIYLYDALTVSVSNPVLTPSSVTVSGTLEVSGTSYLSTTETGSLSSSSVSVNGSLDVDGSTSLSDTT
VDDGLTVRGSTELEESLSVSGSTSLSDATVTGTLSGTGSASLSDLTVRGLYGYSGRVELLGNANLVDQGANLGQTGVYTA
TDGFAVAQVLTPSDNSQASYAYGWIYTSGTWFGVQGGTVGSFGPGWSDFMNTNPNTITVPIPAGSYWYYESFNPSNNQVY
SDVQFWWFPLGSDYGATATYRKLTAEERVAEQVEVPPARPAVPDIAAAVERRENAAAAFVERLAAALEADLAEEVRADLT
RLLNQH

Sequences:

>Translated_566_residues
MPEDSDTILLDYALSTDPAPVPASTAQVVNQARVNIGVSAETTVYCSQIVIAVPIGTDDASLYALAPAGSSNSNKWAVTA
QLRKGRDLWDGLDEDQDYSTFVYDCVSSTDYRVDYNLVFGVFGAVNQTVGDAEIAIQETSGTSSDPTTFTLKPAYFPVRK
EWPAFYLKNLVAATLASPTVPATDFSEGDPVRLSWESNGTYFQLFTKGQSRPVYAGTATTYTLEEGLSRDTAFVLTASMT
GSPDEDVPQGGYEPIYLYDALTVSVSNPVLTPSSVTVSGTLEVSGTSYLSTTETGSLSSSSVSVNGSLDVDGSTSLSDTT
VDDGLTVRGSTELEESLSVSGSTSLSDATVTGTLSGTGSASLSDLTVRGLYGYSGRVELLGNANLVDQGANLGQTGVYTA
TDGFAVAQVLTPSDNSQASYAYGWIYTSGTWFGVQGGTVGSFGPGWSDFMNTNPNTITVPIPAGSYWYYESFNPSNNQVY
SDVQFWWFPLGSDYGATATYRKLTAEERVAEQVEVPPARPAVPDIAAAVERRENAAAAFVERLAAALEADLAEEVRADLT
RLLNQH
>Mature_565_residues
PEDSDTILLDYALSTDPAPVPASTAQVVNQARVNIGVSAETTVYCSQIVIAVPIGTDDASLYALAPAGSSNSNKWAVTAQ
LRKGRDLWDGLDEDQDYSTFVYDCVSSTDYRVDYNLVFGVFGAVNQTVGDAEIAIQETSGTSSDPTTFTLKPAYFPVRKE
WPAFYLKNLVAATLASPTVPATDFSEGDPVRLSWESNGTYFQLFTKGQSRPVYAGTATTYTLEEGLSRDTAFVLTASMTG
SPDEDVPQGGYEPIYLYDALTVSVSNPVLTPSSVTVSGTLEVSGTSYLSTTETGSLSSSSVSVNGSLDVDGSTSLSDTTV
DDGLTVRGSTELEESLSVSGSTSLSDATVTGTLSGTGSASLSDLTVRGLYGYSGRVELLGNANLVDQGANLGQTGVYTAT
DGFAVAQVLTPSDNSQASYAYGWIYTSGTWFGVQGGTVGSFGPGWSDFMNTNPNTITVPIPAGSYWYYESFNPSNNQVYS
DVQFWWFPLGSDYGATATYRKLTAEERVAEQVEVPPARPAVPDIAAAVERRENAAAAFVERLAAALEADLAEEVRADLTR
LLNQH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60007; Mature: 59876

Theoretical pI: Translated: 3.82; Mature: 3.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPEDSDTILLDYALSTDPAPVPASTAQVVNQARVNIGVSAETTVYCSQIVIAVPIGTDDA
CCCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEEEEEEEEECCCCC
SLYALAPAGSSNSNKWAVTAQLRKGRDLWDGLDEDQDYSTFVYDCVSSTDYRVDYNLVFG
EEEEEECCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHEEEHHCCCCEEEEEEEEEE
VFGAVNQTVGDAEIAIQETSGTSSDPTTFTLKPAYFPVRKEWPAFYLKNLVAATLASPTV
HHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
PATDFSEGDPVRLSWESNGTYFQLFTKGQSRPVYAGTATTYTLEEGLSRDTAFVLTASMT
CCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEECCCEEEEHHHCCCCCEEEEEEEECC
GSPDEDVPQGGYEPIYLYDALTVSVSNPVLTPSSVTVSGTLEVSGTSYLSTTETGSLSSS
CCCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCEEEEEEEEECCCEEEEECCCCCCCCC
SVSVNGSLDVDGSTSLSDTTVDDGLTVRGSTELEESLSVSGSTSLSDATVTGTLSGTGSA
EEEECCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCEEEEEEECCCCCC
SLSDLTVRGLYGYSGRVELLGNANLVDQGANLGQTGVYTATDGFAVAQVLTPSDNSQASY
CCCEEEEEEEECCCCEEEEEECCCEEECCCCCCCCCEEEECCCEEEEEEECCCCCCCCEE
AYGWIYTSGTWFGVQGGTVGSFGPGWSDFMNTNPNTITVPIPAGSYWYYESFNPSNNQVY
EEEEEEECCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCEEE
SDVQFWWFPLGSDYGATATYRKLTAEERVAEQVEVPPARPAVPDIAAAVERRENAAAAFV
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERLAAALEADLAEEVRADLTRLLNQH
HHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PEDSDTILLDYALSTDPAPVPASTAQVVNQARVNIGVSAETTVYCSQIVIAVPIGTDDA
CCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHEEECCCCCCEEEEEEEEEEEEECCCCC
SLYALAPAGSSNSNKWAVTAQLRKGRDLWDGLDEDQDYSTFVYDCVSSTDYRVDYNLVFG
EEEEEECCCCCCCCCEEEEEEECCCCHHHCCCCCCCCCHHHEEEHHCCCCEEEEEEEEEE
VFGAVNQTVGDAEIAIQETSGTSSDPTTFTLKPAYFPVRKEWPAFYLKNLVAATLASPTV
HHHHHHCCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHCCCCC
PATDFSEGDPVRLSWESNGTYFQLFTKGQSRPVYAGTATTYTLEEGLSRDTAFVLTASMT
CCCCCCCCCCEEEEECCCCCEEEEEECCCCCCEEECCCEEEEHHHCCCCCEEEEEEEECC
GSPDEDVPQGGYEPIYLYDALTVSVSNPVLTPSSVTVSGTLEVSGTSYLSTTETGSLSSS
CCCCCCCCCCCCCCEEEEEEEEEEECCCEECCCCEEEEEEEEECCCEEEEECCCCCCCCC
SVSVNGSLDVDGSTSLSDTTVDDGLTVRGSTELEESLSVSGSTSLSDATVTGTLSGTGSA
EEEECCEEECCCCCCCCCCCCCCCEEEECCCCHHHHHCCCCCCCCCCEEEEEEECCCCCC
SLSDLTVRGLYGYSGRVELLGNANLVDQGANLGQTGVYTATDGFAVAQVLTPSDNSQASY
CCCEEEEEEEECCCCEEEEEECCCEEECCCCCCCCCEEEECCCEEEEEEECCCCCCCCEE
AYGWIYTSGTWFGVQGGTVGSFGPGWSDFMNTNPNTITVPIPAGSYWYYESFNPSNNQVY
EEEEEEECCEEEEECCCCCCCCCCCHHHHHCCCCCEEEEEECCCCEEEEECCCCCCCEEE
SDVQFWWFPLGSDYGATATYRKLTAEERVAEQVEVPPARPAVPDIAAAVERRENAAAAFV
EEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHH
ERLAAALEADLAEEVRADLTRLLNQH
HHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA