| Definition | Frankia sp. EAN1pec chromosome, complete genome. |
|---|---|
| Accession | NC_009921 |
| Length | 8,982,042 |
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The map label for this gene is 158316176
Identifier: 158316176
GI number: 158316176
Start: 5245407
End: 5246165
Strand: Reverse
Name: 158316176
Synonym: Franean1_4399
Alternate gene names: NA
Gene position: 5246165-5245407 (Counterclockwise)
Preceding gene: 158316178
Following gene: 158316167
Centisome position: 58.41
GC content: 70.62
Gene sequence:
>759_bases GTGACCGATGCCGAGGCCGGGGCGTCCAGCGCGAGGCGGTGGTTCACGCCTGTGACGGAACAGCTCACCCCGGCCGATCT GAAGATCGATGTTCCGCACTCGGCTCGGGTGTACGACTATTTCCTGGGTGGTAAGGACAACTTCCCGGCTGACCGGGAGG CCGCCGAGCAGACGCTGGCCATCTTCCCGGACATGCGGACCGGGGCGCGTGAGAACCGGGCGTTCCTGCACCGCGCGACC CGGAAACTCGTCAGGGAGCTGGGGCTGCGGCAGTTCCTCGACATCGGCACCGGCATCCCGACCTCGCCGAACCTGCACGA GGTCGCGCAGGAGGCCGCCGCGGACGCCCGGATCGTCTACGCCGACAACGATCCGATCGTCCTCGCGCACGCCCGCGCCC TGCTGACCGGTACCCGGCAGGGCCGCACCGCCTACCTCGACGCCGACCTGCGCGAGCCGGAGAAGATCCTCGCCTCGCCC GAACTGGCCGAGACTCTCGACCTCGACCGGCCGCTCGTGCTCTCCCTGATCGCCGTGCTGCACTTCATCCCTGAGTCGGA CGACCCGTACGGCCTGGTCCGCCGTTACACGGAGGTCCTCCCGTCGGGCAGCTACGTGGCGCTCACCCACGCCACCGGGG ACTTCGCGCCGGAGGAGGCGGAGCGGGTCTCGGCCGTCTACCAGGCACGCGGGATCGCGCTGACCCCACGCTCCCGGGGC GGGGTCGAGGGCTTCCTCACCGGCCTCGACCTCGTCTAG
Upstream 100 bases:
>100_bases GTGAGCCGCATGCTGTCTGCTGTGGTCTTGCGGGGATGGGGGCCGGCTGCCCGTTAGGGTGATTCCAGATGGTTGCGCCG GAATGTGGGGGTTGTGCACG
Downstream 100 bases:
>100_bases CCGGGTGTCGTGCCGGTCCACCGCTGGCACGCCGAGATGGACGCCGGGGAGGAACTGGCCGACAGCCGCGTCAACGTCTA CGGCGCCATCGCCCGCGTCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 252; Mature: 251
Protein sequence:
>252_residues MTDAEAGASSARRWFTPVTEQLTPADLKIDVPHSARVYDYFLGGKDNFPADREAAEQTLAIFPDMRTGARENRAFLHRAT RKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVYADNDPIVLAHARALLTGTRQGRTAYLDADLREPEKILASP ELAETLDLDRPLVLSLIAVLHFIPESDDPYGLVRRYTEVLPSGSYVALTHATGDFAPEEAERVSAVYQARGIALTPRSRG GVEGFLTGLDLV
Sequences:
>Translated_252_residues MTDAEAGASSARRWFTPVTEQLTPADLKIDVPHSARVYDYFLGGKDNFPADREAAEQTLAIFPDMRTGARENRAFLHRAT RKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVYADNDPIVLAHARALLTGTRQGRTAYLDADLREPEKILASP ELAETLDLDRPLVLSLIAVLHFIPESDDPYGLVRRYTEVLPSGSYVALTHATGDFAPEEAERVSAVYQARGIALTPRSRG GVEGFLTGLDLV >Mature_251_residues TDAEAGASSARRWFTPVTEQLTPADLKIDVPHSARVYDYFLGGKDNFPADREAAEQTLAIFPDMRTGARENRAFLHRATR KLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVYADNDPIVLAHARALLTGTRQGRTAYLDADLREPEKILASPE LAETLDLDRPLVLSLIAVLHFIPESDDPYGLVRRYTEVLPSGSYVALTHATGDFAPEEAERVSAVYQARGIALTPRSRGG VEGFLTGLDLV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27591; Mature: 27460
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 0.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAEAGASSARRWFTPVTEQLTPADLKIDVPHSARVYDYFLGGKDNFPADREAAEQTLA CCCCCCCHHHHHHHCCCHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHH IFPDMRTGARENRAFLHRATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVY HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEE ADNDPIVLAHARALLTGTRQGRTAYLDADLREPEKILASPELAETLDLDRPLVLSLIAVL ECCCCEEEEEHHHHHHCCCCCCEEEECCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHH HFIPESDDPYGLVRRYTEVLPSGSYVALTHATGDFAPEEAERVSAVYQARGIALTPRSRG HHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEECCCCCC GVEGFLTGLDLV CHHHHHHHHCCC >Mature Secondary Structure TDAEAGASSARRWFTPVTEQLTPADLKIDVPHSARVYDYFLGGKDNFPADREAAEQTLA CCCCCCHHHHHHHCCCHHHCCCCCCEEEECCCCCEEEEEEECCCCCCCCCHHHHHHHHH IFPDMRTGARENRAFLHRATRKLVRELGLRQFLDIGTGIPTSPNLHEVAQEAAADARIVY HCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEE ADNDPIVLAHARALLTGTRQGRTAYLDADLREPEKILASPELAETLDLDRPLVLSLIAVL ECCCCEEEEEHHHHHHCCCCCCEEEECCCCCCHHHHHCCCHHHHHHCCCCHHHHHHHHHH HFIPESDDPYGLVRRYTEVLPSGSYVALTHATGDFAPEEAERVSAVYQARGIALTPRSRG HHCCCCCCCHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHCCEEECCCCCC GVEGFLTGLDLV CHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA