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The map label for this gene is yngJ [H]

Identifier: 158316081

GI number: 158316081

Start: 5137071

End: 5138069

Strand: Reverse

Name: yngJ [H]

Synonym: Franean1_4299

Alternate gene names: 158316081

Gene position: 5138069-5137071 (Counterclockwise)

Preceding gene: 158316083

Following gene: 158316080

Centisome position: 57.2

GC content: 72.57

Gene sequence:

>999_bases
ATGCTCTTTGAGTTCGACTCCGACCAGCGGCTGTGGCAGAAGACGATCCACGAGGTCCTGGTCAAGGAATGCCCGTCGGC
GCTGATCCGCGGGATCGCCGACGAGGGCGCCGACCCCGCCCCGCTGTGGCGGGTCTACGCCAACCTCGGCTGGACCGAGC
TGACCGAGCCCAGCGAGGCCGTGGAGCTGGCGATCGTCCTCGAGGAGCTCGGCTGGGCGACCGACCCGACCCCCTACCTG
GCGACGATGACCTGGTTCGCCCCGCTCGCCCCGGGGGTCGCCGAGGGGGGCCAGACCGGTAGCGCCGTCCTGGACGGCGT
GTCCGCCCGGCGTGACCGCGACGGTTGGGTCCTCAGTGGCGTCGCGCGGTACGTCCTCGACGGTGACCGCGCAGACCGGC
TGGCCGTCGTGACCGACGCGGGGGTCTTCATCGTCCCCGCGGCTGATGTGCGGGCCACCCGGGTCGACGTCTTCGACCCC
ACGCTGCACATCGCAGAGGTCTCGCTGCCCGGCGTCCGGGTCGGCGACGACGCGCGCACGGGCGCCGACCCACGGGCGGC
CCGGGACCTCGCGCTCACCGGGCTGGCCCTCACGATCGTCGGGGCCTGCCGCCGTGTTCTGGAGCTGACGCTCGACCACG
TCCGCACCCGCGAGCAGTTCGGTGCGCCGATCGGGTCGTTCCAGGCCGTCAAGCACAAGGCGGTGGACATGCACGTCGCG
CTGGAACGCGCCCGCGCGCTGGCCTACTTCGCGGCGCTGACCATCGCGGCCGACGACCCGCGCCGCCGGCTCGCCGCCTC
CATGGCCAAAGCCGCCGCCGGCGAGTGCCAGTCGGTGGTGTTCCGCAACGGCCTGCAGCTTTTCGGAGCCATGGGCTTCA
CCTGGGAGAACGACCTGCAGTTCGCGCTCAAGCGGGCAGTCGCGGGCGAGCTGCTGCTCGGCGGCGCCGCCGAGCACCGG
GCGCTGATCGCCGAGGAGTACCGTGCAGCTCACGTTTGA

Upstream 100 bases:

>100_bases
ACGATCTTCGCTGACCCGCGTGGCGGCACGGGAGGCCCGGCCGTGGCGCCCCCCGCCCGCCCCGCCGCGGCCGGCACCGC
CGCGAGCCCGGGAGGGCAAG

Downstream 100 bases:

>100_bases
TGCCGACGTCGAGAAGTTCCGCGCCGAGTTCGTGGCGTTCCTGGACGCGCACCTGCCCAGCGAGGCCGAGACCGGCGAGC
GCGCCTACTCGAGCGCGCAC

Product: acyl-CoA dehydrogenase domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 332; Mature: 332

Protein sequence:

>332_residues
MLFEFDSDQRLWQKTIHEVLVKECPSALIRGIADEGADPAPLWRVYANLGWTELTEPSEAVELAIVLEELGWATDPTPYL
ATMTWFAPLAPGVAEGGQTGSAVLDGVSARRDRDGWVLSGVARYVLDGDRADRLAVVTDAGVFIVPAADVRATRVDVFDP
TLHIAEVSLPGVRVGDDARTGADPRAARDLALTGLALTIVGACRRVLELTLDHVRTREQFGAPIGSFQAVKHKAVDMHVA
LERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSVVFRNGLQLFGAMGFTWENDLQFALKRAVAGELLLGGAAEHR
ALIAEEYRAAHV

Sequences:

>Translated_332_residues
MLFEFDSDQRLWQKTIHEVLVKECPSALIRGIADEGADPAPLWRVYANLGWTELTEPSEAVELAIVLEELGWATDPTPYL
ATMTWFAPLAPGVAEGGQTGSAVLDGVSARRDRDGWVLSGVARYVLDGDRADRLAVVTDAGVFIVPAADVRATRVDVFDP
TLHIAEVSLPGVRVGDDARTGADPRAARDLALTGLALTIVGACRRVLELTLDHVRTREQFGAPIGSFQAVKHKAVDMHVA
LERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSVVFRNGLQLFGAMGFTWENDLQFALKRAVAGELLLGGAAEHR
ALIAEEYRAAHV
>Mature_332_residues
MLFEFDSDQRLWQKTIHEVLVKECPSALIRGIADEGADPAPLWRVYANLGWTELTEPSEAVELAIVLEELGWATDPTPYL
ATMTWFAPLAPGVAEGGQTGSAVLDGVSARRDRDGWVLSGVARYVLDGDRADRLAVVTDAGVFIVPAADVRATRVDVFDP
TLHIAEVSLPGVRVGDDARTGADPRAARDLALTGLALTIVGACRRVLELTLDHVRTREQFGAPIGSFQAVKHKAVDMHVA
LERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSVVFRNGLQLFGAMGFTWENDLQFALKRAVAGELLLGGAAEHR
ALIAEEYRAAHV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI4557233, Length=266, Percent_Identity=25.187969924812, Blast_Score=68, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 35775; Mature: 35775

Theoretical pI: Translated: 4.99; Mature: 4.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFEFDSDQRLWQKTIHEVLVKECPSALIRGIADEGADPAPLWRVYANLGWTELTEPSEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCHHH
VELAIVLEELGWATDPTPYLATMTWFAPLAPGVAEGGQTGSAVLDGVSARRDRDGWVLSG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCHHHHHCHHHCCCCCCHHHHH
VARYVLDGDRADRLAVVTDAGVFIVPAADVRATRVDVFDPTLHIAEVSLPGVRVGDDART
HHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCC
GADPRAARDLALTGLALTIVGACRRVLELTLDHVRTREQFGAPIGSFQAVKHKAVDMHVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSVVFRNGLQLFGAMGFTWENDLQ
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FALKRAVAGELLLGGAAEHRALIAEEYRAAHV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLFEFDSDQRLWQKTIHEVLVKECPSALIRGIADEGADPAPLWRVYANLGWTELTEPSEA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCHHCCCCHHH
VELAIVLEELGWATDPTPYLATMTWFAPLAPGVAEGGQTGSAVLDGVSARRDRDGWVLSG
HHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCHHCCCCCCHHHHHCHHHCCCCCCHHHHH
VARYVLDGDRADRLAVVTDAGVFIVPAADVRATRVDVFDPTLHIAEVSLPGVRVGDDART
HHHHHHCCCCCCEEEEEECCCEEEEECCCCCEEEEEEECCCEEEEEECCCCEEECCCCCC
GADPRAARDLALTGLALTIVGACRRVLELTLDHVRTREQFGAPIGSFQAVKHKAVDMHVA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHH
LERARALAYFAALTIAADDPRRRLAASMAKAAAGECQSVVFRNGLQLFGAMGFTWENDLQ
HHHHHHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH
FALKRAVAGELLLGGAAEHRALIAEEYRAAHV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]