Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

Click here to switch to the map view.

The map label for this gene is 158315871

Identifier: 158315871

GI number: 158315871

Start: 4867369

End: 4867728

Strand: Reverse

Name: 158315871

Synonym: Franean1_4086

Alternate gene names: NA

Gene position: 4867728-4867369 (Counterclockwise)

Preceding gene: 158315872

Following gene: 158315869

Centisome position: 54.19

GC content: 57.22

Gene sequence:

>360_bases
ATGACCTGCGCCGGCGCCCTCCGGCTGCTCTATCTGGCGTTCATTCTCGGCCCAAATATCCCAACCCTCACCCGGGTCAC
CCGGCGGATTCTCCGAGACGTAGATATGCCAACCCGTTCCGGTTCTGTCTTTTTCTATGTAGATATAACGGCCATCACAC
TCTCCGGCTACAACCCTTCCAGCCACGCCTGTCCGCCACAATGGAGACGAAGACCGTTCGCACTTATTCTACCGACATCC
GTCGAACGGGAGCCGTCACCTACCAACATACGCCCCGCTAGCGCGGAATTAGGGCGCGAAGCTCGTCCCGCGATATTGAA
CATCTTGGATCCGGTGCGAGCAAGTCTCACAATACGATAG

Upstream 100 bases:

>100_bases
TCGCCGCAGGACGATGTGCGGTAGTCGGTCTGTCCTACCGGCTCGCTGAGGGCACCGTCGGCGTTGTCACCAGCCACGGG
CCTGTACCCGCAGCCACCCG

Downstream 100 bases:

>100_bases
GCCCTATACGCCGTGACCGCGCCCCCTGCCACTGGGATAAAGGAGGCTGCCGTCCCAGAAGGCGACAGGCCGCTCAGGAT
CCGCGGGTGTGTGGCCTCGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 119; Mature: 118

Protein sequence:

>119_residues
MTCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPSSHACPPQWRRRPFALILPTS
VEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR

Sequences:

>Translated_119_residues
MTCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPSSHACPPQWRRRPFALILPTS
VEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR
>Mature_118_residues
TCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPSSHACPPQWRRRPFALILPTSV
EREPSPTNIRPASAELGREARPAILNILDPVRASLTIR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13228; Mature: 13096

Theoretical pI: Translated: 11.42; Mature: 11.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPS
CCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCC
SHACPPQWRRRPFALILPTSVEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR
CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECC
>Mature Secondary Structure 
TCAGALRLLYLAFILGPNIPTLTRVTRRILRDVDMPTRSGSVFFYVDITAITLSGYNPS
CHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEEEEECCCCC
SHACPPQWRRRPFALILPTSVEREPSPTNIRPASAELGREARPAILNILDPVRASLTIR
CCCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCHHHCCCCCCHHHHHHHCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA